RNA–Protein interactions for RNA: ENST00000601816.3

PNKP-216, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 682 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-216ENST00000601816 OR13C7P0DN81 318 aa19.71■□□□□ 0.75
PNKP-216ENST00000601816 DEFB114Q30KQ6 69 aa19.71■□□□□ 0.75
PNKP-216ENST00000601816 FAM106AQ4KMX7 169 aa19.71■□□□□ 0.75
PNKP-216ENST00000601816 SLC38A6Q8IZM9 456 aa19.71■□□□□ 0.75
PNKP-216ENST00000601816 HINT2Q9BX68 163 aa19.71■□□□□ 0.75
PNKP-216ENST00000601816 MRPS26Q9BYN8 205 aaKnown RBP19.71■□□□□ 0.75
PNKP-216ENST00000601816 TUBA4BQ9H853 241 aa19.71■□□□□ 0.75
PNKP-216ENST00000601816 FAM212BQ9NTI7 297 aaPredicted RBP19.71■□□□□ 0.75
PNKP-216ENST00000601816 NSG2Q9Y328 171 aa19.71■□□□□ 0.75
PNKP-216ENST00000601816 ZNF320A2RRD8 509 aa19.7■□□□□ 0.74
PNKP-216ENST00000601816 CLEC3BP05452 202 aa19.7■□□□□ 0.74
PNKP-216ENST00000601816 EDN2P20800 178 aa19.7■□□□□ 0.74
PNKP-216ENST00000601816 UCP3P55916 312 aa19.7■□□□□ 0.74
PNKP-216ENST00000601816 WT1-ASQ06250 92 aa19.7■□□□□ 0.74
PNKP-216ENST00000601816 TBC1D26Q86UD7 250 aa19.7■□□□□ 0.74
PNKP-216ENST00000601816 LAX1Q8IWV1 398 aa19.7■□□□□ 0.74
PNKP-216ENST00000601816 LSM10Q969L4 123 aaKnown RBP19.7■□□□□ 0.74
PNKP-216ENST00000601816 NDUFA4L2Q9NRX3 87 aa19.7■□□□□ 0.74
PNKP-216ENST00000601816 TECRQ9NZ01 308 aaKnown RBP19.7■□□□□ 0.74
PNKP-216ENST00000601816 EXTL2Q9UBQ6 330 aa19.7■□□□□ 0.74
PNKP-216ENST00000601816 PRNDQ9UKY0 176 aa19.7■□□□□ 0.74
PNKP-216ENST00000601816 OR51B2Q9Y5P1 312 aa19.7■□□□□ 0.74
PNKP-216ENST00000601816 KMT2CQ8NEZ4 4911 aaKnown RBP19.7■□□□□ 0.74
PNKP-216ENST00000601816 M0QYG6 137 aa19.69■□□□□ 0.74
PNKP-216ENST00000601816 SERPINE2P07093 398 aa19.69■□□□□ 0.74
PNKP-216ENST00000601816 GPR183P32249 361 aa19.69■□□□□ 0.74
PNKP-216ENST00000601816 ZNF502Q8TBZ5 544 aa19.69■□□□□ 0.74
PNKP-216ENST00000601816 ZC4H2Q9NQZ6 224 aa19.69■□□□□ 0.74
PNKP-216ENST00000601816 A8MWP6 167 aa19.68■□□□□ 0.74
PNKP-216ENST00000601816 C3orf84H3BNL1 204 aa19.68■□□□□ 0.74
PNKP-216ENST00000601816 IFNA6P05013 189 aa19.68■□□□□ 0.74
PNKP-216ENST00000601816 CBLN1P23435 193 aa19.68■□□□□ 0.74
PNKP-216ENST00000601816 PTBP1P26599 531 aaKnown RBP eCLIP19.68■□□□□ 0.74
PNKP-216ENST00000601816 CD81P60033 236 aa19.68■□□□□ 0.74
PNKP-216ENST00000601816 GPR141Q7Z602 305 aa19.68■□□□□ 0.74
PNKP-216ENST00000601816 CACNG8Q8WXS5 425 aa19.68■□□□□ 0.74
PNKP-216ENST00000601816 TSC22D3Q99576 134 aa19.68■□□□□ 0.74
PNKP-216ENST00000601816 SLC2A8Q9NY64 477 aa19.68■□□□□ 0.74
PNKP-216ENST00000601816 FKBP11Q9NYL4 201 aa19.68■□□□□ 0.74
PNKP-216ENST00000601816 KLK11Q9UBX7 282 aa19.68■□□□□ 0.74
PNKP-216ENST00000601816 TMEM213A2RRL7 107 aa19.67■□□□□ 0.74
PNKP-216ENST00000601816 ZNF785A8K8V0 405 aa19.67■□□□□ 0.74
PNKP-216ENST00000601816 GUCA2BQ16661 112 aa19.67■□□□□ 0.74
PNKP-216ENST00000601816 RNASE10Q5GAN6 216 aaKnown RBP19.67■□□□□ 0.74
PNKP-216ENST00000601816 SLC25A24Q6NUK1 477 aa19.67■□□□□ 0.74
PNKP-216ENST00000601816 OR5B3Q8NH48 314 aa19.67■□□□□ 0.74
PNKP-216ENST00000601816 OR52I2Q8NH67 350 aa19.67■□□□□ 0.74
PNKP-216ENST00000601816 VN1R17PQ8TDU5 208 aa19.67■□□□□ 0.74
PNKP-216ENST00000601816 NEURL2Q9BR09 285 aa19.67■□□□□ 0.74
PNKP-216ENST00000601816 F11RQ9Y624 299 aaKnown RBP19.67■□□□□ 0.74
PNKP-216ENST00000601816 TPPPO94811 219 aa19.66■□□□□ 0.74
PNKP-216ENST00000601816 ALDH3B2P48448 385 aa19.66■□□□□ 0.74
PNKP-216ENST00000601816 PLET1Q6UQ28 207 aa19.66■□□□□ 0.74
PNKP-216ENST00000601816 C15orf40Q8WUR7 153 aa19.66■□□□□ 0.74
PNKP-216ENST00000601816 TMEM56Q96MV1 263 aa19.66■□□□□ 0.74
PNKP-216ENST00000601816 C15orf61A6NNL5 157 aa19.65■□□□□ 0.74
PNKP-216ENST00000601816 PGAM2P15259 253 aa19.65■□□□□ 0.74
PNKP-216ENST00000601816 HAGHQ16775 308 aa19.65■□□□□ 0.74
PNKP-216ENST00000601816 MUC7Q8TAX7 377 aa19.65■□□□□ 0.74
PNKP-216ENST00000601816 PLEKHA3Q9HB20 300 aa19.65■□□□□ 0.74
PNKP-216ENST00000601816 PALMDQ9NP74 551 aa19.65■□□□□ 0.74
PNKP-216ENST00000601816 TMEM14BQ9NUH8 114 aa19.65■□□□□ 0.74
PNKP-216ENST00000601816 MTFP1Q9UDX5 166 aa19.65■□□□□ 0.74
PNKP-216ENST00000601816 TBPP20226 339 aa19.64■□□□□ 0.73
PNKP-216ENST00000601816 UNQ9165/PRO28630Q6UXU0 137 aa19.64■□□□□ 0.73
PNKP-216ENST00000601816 H2BFWTQ7Z2G1 175 aa19.64■□□□□ 0.73
PNKP-216ENST00000601816 ARRDC1Q8N5I2 433 aa19.64■□□□□ 0.73
PNKP-216ENST00000601816 UXS1Q8NBZ7 420 aa19.64■□□□□ 0.73
PNKP-216ENST00000601816 WDR89Q96FK6 387 aaPredicted RBP19.64■□□□□ 0.73
PNKP-216ENST00000601816 SEC22AQ96IW7 307 aa19.64■□□□□ 0.73
PNKP-216ENST00000601816 ABHD1Q96SE0 405 aa19.64■□□□□ 0.73
PNKP-216ENST00000601816 SPATA25Q9BR10 227 aa19.64■□□□□ 0.73
PNKP-216ENST00000601816 NBEAL2Q6ZNJ1 2754 aa19.63■□□□□ 0.73
PNKP-216ENST00000601816 DBX1A6NMT0 343 aa19.63■□□□□ 0.73
PNKP-216ENST00000601816 TGOLN2O43493 480 aa19.63■□□□□ 0.73
PNKP-216ENST00000601816 CD3DP04234 171 aa19.63■□□□□ 0.73
PNKP-216ENST00000601816 CD7P09564 240 aa19.63■□□□□ 0.73
PNKP-216ENST00000601816 MFAP2P55001 183 aa19.63■□□□□ 0.73
PNKP-216ENST00000601816 ZNF57Q68EA5 555 aaPredicted RBP19.63■□□□□ 0.73
PNKP-216ENST00000601816 LHFPL1Q86WI0 220 aa19.63■□□□□ 0.73
PNKP-216ENST00000601816 OR1L6Q8NGR2 347 aa19.63■□□□□ 0.73
PNKP-216ENST00000601816 OR4A16Q8NH70 328 aa19.63■□□□□ 0.73
PNKP-216ENST00000601816 MRGPRFQ96AM1 343 aa19.63■□□□□ 0.73
PNKP-216ENST00000601816 ZNF486Q96H40 463 aaPredicted RBP19.63■□□□□ 0.73
PNKP-216ENST00000601816 SELENOKQ9Y6D0 94 aa19.63■□□□□ 0.73
PNKP-216ENST00000601816 IGHV3-35A0A0C4DH35 117 aa19.62■□□□□ 0.73
PNKP-216ENST00000601816 RGS5O15539 181 aa19.62■□□□□ 0.73
PNKP-216ENST00000601816 IGKV1-39P01597 117 aa19.62■□□□□ 0.73
PNKP-216ENST00000601816 IGKV1D-39P04432 117 aa19.62■□□□□ 0.73
PNKP-216ENST00000601816 RND3P61587 244 aa19.62■□□□□ 0.73
PNKP-216ENST00000601816 TM4SF20Q53R12 229 aa19.62■□□□□ 0.73
PNKP-216ENST00000601816 TMEM61Q8N0U2 210 aa19.62■□□□□ 0.73
PNKP-216ENST00000601816 MARC2Q969Z3 335 aa19.62■□□□□ 0.73
PNKP-216ENST00000601816 CITED4Q96RK1 184 aa19.62■□□□□ 0.73
PNKP-216ENST00000601816 MLXQ9UH92 298 aa19.62■□□□□ 0.73
PNKP-216ENST00000601816 UFC1Q9Y3C8 167 aa19.62■□□□□ 0.73
PNKP-216ENST00000601816 PI3P19957 117 aa19.61■□□□□ 0.73
PNKP-216ENST00000601816 ZNF436Q9C0F3 470 aaPredicted RBP19.61■□□□□ 0.73
PNKP-216ENST00000601816 MIXL1Q9H2W2 232 aa19.61■□□□□ 0.73
PNKP-216ENST00000601816 C21orf62Q9NYP8 219 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms