RNA–Protein interactions for RNA: ENST00000601324.1

VRK3-222, Transcript of vaccinia related kinase 3, humanhuman

TSL 4

Gene VRK3, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-222ENST00000601324 RPL13AP3Q6NVV1 102 aa2.95□□□□□ -1.94
VRK3-222ENST00000601324 UNQ5815/PRO19632Q6UWF5 114 aa2.95□□□□□ -1.94
VRK3-222ENST00000601324 SLC16A13Q7RTY0 426 aa2.95□□□□□ -1.94
VRK3-222ENST00000601324 ERASQ7Z444 233 aa2.95□□□□□ -1.94
VRK3-222ENST00000601324 TMEM179BQ7Z7N9 219 aa2.95□□□□□ -1.94
VRK3-222ENST00000601324 ZNF679Q8IYX0 411 aa2.95□□□□□ -1.94
VRK3-222ENST00000601324 KCNG3Q8TAE7 436 aa2.95□□□□□ -1.94
VRK3-222ENST00000601324 UBALD1Q8TB05 177 aa2.95□□□□□ -1.94
VRK3-222ENST00000601324 GNPDA2Q8TDQ7 276 aa2.95□□□□□ -1.94
VRK3-222ENST00000601324 THEM6Q8WUY1 208 aa2.95□□□□□ -1.94
VRK3-222ENST00000601324 CACNG8Q8WXS5 425 aa2.95□□□□□ -1.94
VRK3-222ENST00000601324 ZNF251Q9BRH9 671 aa2.95□□□□□ -1.94
VRK3-222ENST00000601324 MRPL20Q9BYC9 149 aaKnown RBP2.95□□□□□ -1.94
VRK3-222ENST00000601324 FBXL15Q9H469 300 aa2.95□□□□□ -1.94
VRK3-222ENST00000601324 RDH8Q9NYR8 311 aa2.95□□□□□ -1.94
VRK3-222ENST00000601324 NACAE9PAV3 2078 aa2.95□□□□□ -1.94
VRK3-222ENST00000601324 PKHD1L1Q86WI1 4243 aa2.94□□□□□ -1.94
VRK3-222ENST00000601324 TRBV9A0A0B4J1U6 114 aa2.94□□□□□ -1.94
VRK3-222ENST00000601324 TRAV10A0A0B4J240 114 aa2.94□□□□□ -1.94
VRK3-222ENST00000601324 A0A0G2JLM5 398 aa2.94□□□□□ -1.94
VRK3-222ENST00000601324 CCDC182A6NF36 153 aa2.94□□□□□ -1.94
VRK3-222ENST00000601324 A8MWP6 167 aa2.94□□□□□ -1.94
VRK3-222ENST00000601324 DEFB4AO15263 64 aa2.94□□□□□ -1.94
VRK3-222ENST00000601324 MAGEB4O15481 346 aaPredicted RBP2.94□□□□□ -1.94
VRK3-222ENST00000601324 ZNF254O75437 659 aa2.94□□□□□ -1.94
VRK3-222ENST00000601324 CRYGBP07316 175 aa2.94□□□□□ -1.94
VRK3-222ENST00000601324 ZNF44P15621 663 aa2.94□□□□□ -1.94
VRK3-222ENST00000601324 GZMHP20718 246 aa2.94□□□□□ -1.94
VRK3-222ENST00000601324 ZBTB25P24278 435 aa2.94□□□□□ -1.94
VRK3-222ENST00000601324 HLA-DMBP28068 263 aa2.94□□□□□ -1.94
VRK3-222ENST00000601324 ATP1B3P54709 279 aa2.94□□□□□ -1.94
VRK3-222ENST00000601324 HTD2P86397 168 aa2.94□□□□□ -1.94
VRK3-222ENST00000601324 TMEM267Q0VDI3 215 aaPredicted RBP2.94□□□□□ -1.94
VRK3-222ENST00000601324 RPEL1Q2QD12 228 aa2.94□□□□□ -1.94
VRK3-222ENST00000601324 LINC01620Q4KN68 170 aa2.94□□□□□ -1.94
VRK3-222ENST00000601324 C9orf129Q5T035 196 aaKnown RBP2.94□□□□□ -1.94
VRK3-222ENST00000601324 ELP2Q6IA86 826 aa2.94□□□□□ -1.94
VRK3-222ENST00000601324 OR8G2PQ6IF36 304 aa2.94□□□□□ -1.94
VRK3-222ENST00000601324 ZNF833PQ6ZTB9 187 aa2.94□□□□□ -1.94
VRK3-222ENST00000601324 SPATA12Q7Z6I5 190 aa2.94□□□□□ -1.94
VRK3-222ENST00000601324 CYP4Z1Q86W10 505 aa2.94□□□□□ -1.94
VRK3-222ENST00000601324 SAXO1Q8IYX7 474 aa2.94□□□□□ -1.94
VRK3-222ENST00000601324 GAPTQ8N292 157 aa2.94□□□□□ -1.94
VRK3-222ENST00000601324 BBS1Q8NFJ9 593 aa2.94□□□□□ -1.94
VRK3-222ENST00000601324 CNIH3Q8TBE1 160 aa2.94□□□□□ -1.94
VRK3-222ENST00000601324 IL1F10Q8WWZ1 152 aa2.94□□□□□ -1.94
VRK3-222ENST00000601324 ANP32BQ92688 251 aaKnown RBP2.94□□□□□ -1.94
VRK3-222ENST00000601324 ADAT3Q96EY9 351 aaPredicted RBP2.94□□□□□ -1.94
VRK3-222ENST00000601324 RARRES2Q99969 163 aa2.94□□□□□ -1.94
VRK3-222ENST00000601324 PAIP2Q9BPZ3 127 aaKnown RBP2.94□□□□□ -1.94
VRK3-222ENST00000601324 TSSK6Q9BXA6 273 aa2.94□□□□□ -1.94
VRK3-222ENST00000601324 YIPF3Q9GZM5 350 aa2.94□□□□□ -1.94
VRK3-222ENST00000601324 RHOFQ9HBH0 211 aa2.94□□□□□ -1.94
VRK3-222ENST00000601324 ARMC1Q9NVT9 282 aa2.94□□□□□ -1.94
VRK3-222ENST00000601324 ZNF230Q9UIE0 474 aaPredicted RBP2.94□□□□□ -1.94
VRK3-222ENST00000601324 OR52A1Q9UKL2 312 aa2.94□□□□□ -1.94
VRK3-222ENST00000601324 SAMD4AQ9UPU9 718 aaKnown RBP2.94□□□□□ -1.94
VRK3-222ENST00000601324 BAIAP2Q9UQB8 552 aa2.94□□□□□ -1.94
VRK3-222ENST00000601324 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.93□□□□□ -1.94
VRK3-222ENST00000601324 IGHV3-43A0A0B4J1X8 118 aa2.93□□□□□ -1.94
VRK3-222ENST00000601324 TRAV25A0A0B4J276 109 aa2.93□□□□□ -1.94
VRK3-222ENST00000601324 FAM74A7A6NL05 159 aa2.93□□□□□ -1.94
VRK3-222ENST00000601324 ZFP92A6NM28 416 aa2.93□□□□□ -1.94
VRK3-222ENST00000601324 H0YJX3 145 aa2.93□□□□□ -1.94
VRK3-222ENST00000601324 NME4O00746 187 aa2.93□□□□□ -1.94
VRK3-222ENST00000601324 MRASO14807 208 aa2.93□□□□□ -1.94
VRK3-222ENST00000601324 DEGS1O15121 323 aa2.93□□□□□ -1.94
VRK3-222ENST00000601324 RGS16O15492 202 aaPredicted RBP2.93□□□□□ -1.94
VRK3-222ENST00000601324 ORC5O43913 435 aa2.93□□□□□ -1.94
VRK3-222ENST00000601324 GADD45GO95257 159 aa2.93□□□□□ -1.94
VRK3-222ENST00000601324 FADS2O95864 444 aaKnown RBP2.93□□□□□ -1.94
VRK3-222ENST00000601324 IGHV3-43DP0DP04 118 aa2.93□□□□□ -1.94
VRK3-222ENST00000601324 NCK1P16333 377 aa2.93□□□□□ -1.94
VRK3-222ENST00000601324 IL3RAP26951 378 aa2.93□□□□□ -1.94
VRK3-222ENST00000601324 KCNJ3P48549 501 aa2.93□□□□□ -1.94
VRK3-222ENST00000601324 RBP2P50120 134 aa2.93□□□□□ -1.94
VRK3-222ENST00000601324 CRISP1P54107 249 aa2.93□□□□□ -1.94
VRK3-222ENST00000601324 ADARB1P78563 741 aaKnown RBP2.93□□□□□ -1.94
VRK3-222ENST00000601324 LIPEQ05469 1076 aa2.93□□□□□ -1.94
VRK3-222ENST00000601324 GK3PQ14409 553 aa2.93□□□□□ -1.94
VRK3-222ENST00000601324 PSG5Q15238 335 aa2.93□□□□□ -1.94
VRK3-222ENST00000601324 TATDN3Q17R31 274 aa2.93□□□□□ -1.94
VRK3-222ENST00000601324 KLK9Q2XQG4 91 aa2.93□□□□□ -1.94
VRK3-222ENST00000601324 C12orf74Q32Q52 190 aa2.93□□□□□ -1.94
VRK3-222ENST00000601324 ZNF829Q3KNS6 432 aaPredicted RBP2.93□□□□□ -1.94
VRK3-222ENST00000601324 FAM74A3Q4VXF1 159 aa2.93□□□□□ -1.94
VRK3-222ENST00000601324 SOHLH1Q5JUK2 328 aa2.93□□□□□ -1.94
VRK3-222ENST00000601324 FAM131AQ6UXB0 335 aa2.93□□□□□ -1.94
VRK3-222ENST00000601324 PLEKHG7Q6ZR37 379 aa2.93□□□□□ -1.94
VRK3-222ENST00000601324 UTS2BQ765I0 119 aa2.93□□□□□ -1.94
VRK3-222ENST00000601324 MOB1BQ7L9L4 216 aa2.93□□□□□ -1.94
VRK3-222ENST00000601324 GPHB5Q86YW7 130 aa2.93□□□□□ -1.94
VRK3-222ENST00000601324 OR5T1Q8NG75 326 aa2.93□□□□□ -1.94
VRK3-222ENST00000601324 OR2T33Q8NG76 320 aa2.93□□□□□ -1.94
VRK3-222ENST00000601324 OR11H2Q8NH07 326 aa2.93□□□□□ -1.94
VRK3-222ENST00000601324 DYNLRB2Q8TF09 96 aa2.93□□□□□ -1.94
VRK3-222ENST00000601324 GHSRQ92847 366 aa2.93□□□□□ -1.94
VRK3-222ENST00000601324 C10orf35Q96D05 121 aa2.93□□□□□ -1.94
VRK3-222ENST00000601324 BORCS8Q96FH0 119 aa2.93□□□□□ -1.94
VRK3-222ENST00000601324 USMG5Q96IX5 58 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms