RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 C10orf55Q5SWW7 151 aa17.98■□□□□ 0.47
IRF3-228ENST00000601291 BOLA1Q9Y3E2 137 aa17.98■□□□□ 0.47
IRF3-228ENST00000601291 STRAPQ9Y3F4 350 aaKnown RBP17.98■□□□□ 0.47
IRF3-228ENST00000601291 KANTRA0A1W2PQU2 76 aa17.97■□□□□ 0.47
IRF3-228ENST00000601291 IGSF23A1L1A6 192 aa17.97■□□□□ 0.47
IRF3-228ENST00000601291 BTBD17A6NE02 478 aa17.97■□□□□ 0.47
IRF3-228ENST00000601291 FCN1O00602 326 aa17.97■□□□□ 0.47
IRF3-228ENST00000601291 CNIH1O95406 144 aa17.97■□□□□ 0.47
IRF3-228ENST00000601291 BAXQ07812 192 aa17.97■□□□□ 0.47
IRF3-228ENST00000601291 IL17RELQ6ZVW7 336 aa17.97■□□□□ 0.47
IRF3-228ENST00000601291 TMEM219Q86XT9 240 aa17.97■□□□□ 0.47
IRF3-228ENST00000601291 OR5R1Q8NH85 324 aa17.97■□□□□ 0.47
IRF3-228ENST00000601291 TMEM160Q9NX00 188 aa17.97■□□□□ 0.47
IRF3-228ENST00000601291 A6NDX4 124 aa17.96■□□□□ 0.47
IRF3-228ENST00000601291 FGF16O43320 207 aa17.96■□□□□ 0.47
IRF3-228ENST00000601291 IFNA10P01566 189 aa17.96■□□□□ 0.47
IRF3-228ENST00000601291 LY6EQ16553 131 aa17.96■□□□□ 0.47
IRF3-228ENST00000601291 SRSF12Q8WXF0 261 aaKnown RBP17.96■□□□□ 0.47
IRF3-228ENST00000601291 PAIP2BQ9ULR5 123 aaKnown RBP17.96■□□□□ 0.47
IRF3-228ENST00000601291 U3KQ87 197 aa17.96■□□□□ 0.47
IRF3-228ENST00000601291 INS-IGF2F8WCM5 200 aa17.96■□□□□ 0.46
IRF3-228ENST00000601291 HLA-DRB1P01911 266 aa17.96■□□□□ 0.46
IRF3-228ENST00000601291 SULT1A1P50225 295 aa17.96■□□□□ 0.46
IRF3-228ENST00000601291 ERHP84090 104 aaKnown RBP17.96■□□□□ 0.46
IRF3-228ENST00000601291 TMEM267Q0VDI3 215 aaPredicted RBP17.96■□□□□ 0.46
IRF3-228ENST00000601291 OPCMLQ14982 345 aa17.96■□□□□ 0.46
IRF3-228ENST00000601291 C16orf82Q7Z2V1 217 aa17.96■□□□□ 0.46
IRF3-228ENST00000601291 ARPC5LQ9BPX5 153 aa17.96■□□□□ 0.46
IRF3-228ENST00000601291 FLNAP21333 2647 aaKnown RBP17.95■□□□□ 0.46
IRF3-228ENST00000601291 E7EUB6 86 aa17.95■□□□□ 0.46
IRF3-228ENST00000601291 BCL2L11O43521 198 aa17.95■□□□□ 0.46
IRF3-228ENST00000601291 SCAF4O95104 1147 aaKnown RBP17.95■□□□□ 0.46
IRF3-228ENST00000601291 IER3P46695 156 aa17.95■□□□□ 0.46
IRF3-228ENST00000601291 FXYD3Q14802 87 aa17.95■□□□□ 0.46
IRF3-228ENST00000601291 TMEM14EPQ6UXP3 125 aa17.95■□□□□ 0.46
IRF3-228ENST00000601291 ZNF562Q6V9R5 426 aa17.95■□□□□ 0.46
IRF3-228ENST00000601291 Q6YL49 198 aa17.95■□□□□ 0.46
IRF3-228ENST00000601291 HSD17B13Q7Z5P4 300 aaPredicted RBP17.95■□□□□ 0.46
IRF3-228ENST00000601291 C5orf56Q8N8D9 126 aa17.95■□□□□ 0.46
IRF3-228ENST00000601291 SLC24A4Q8NFF2 622 aa17.95■□□□□ 0.46
IRF3-228ENST00000601291 OR4C12Q96R67 309 aa17.95■□□□□ 0.46
IRF3-228ENST00000601291 AKAP9Q99996 3911 aa17.94■□□□□ 0.46
IRF3-228ENST00000601291 CGB1A6NKQ9 187 aa17.94■□□□□ 0.46
IRF3-228ENST00000601291 M0QZK8 103 aa17.94■□□□□ 0.46
IRF3-228ENST00000601291 IGHV4-59P01825 116 aa17.94■□□□□ 0.46
IRF3-228ENST00000601291 CD99P14209 185 aa17.94■□□□□ 0.46
IRF3-228ENST00000601291 FOSL1P15407 271 aa17.94■□□□□ 0.46
IRF3-228ENST00000601291 NHLH2Q02577 135 aa17.94■□□□□ 0.46
IRF3-228ENST00000601291 OR10W1Q8NGF6 305 aa17.94■□□□□ 0.46
IRF3-228ENST00000601291 PRDM13Q9H4Q3 707 aa17.94■□□□□ 0.46
IRF3-228ENST00000601291 TAAR5O14804 337 aa17.93■□□□□ 0.46
IRF3-228ENST00000601291 CST7O76096 145 aa17.93■□□□□ 0.46
IRF3-228ENST00000601291 OR8U8P0C7N1 319 aa17.93■□□□□ 0.46
IRF3-228ENST00000601291 METTL15P1P0C7V9 234 aa17.93■□□□□ 0.46
IRF3-228ENST00000601291 SNCAP37840 140 aa17.93■□□□□ 0.46
IRF3-228ENST00000601291 HTR2BP41595 481 aa17.93■□□□□ 0.46
IRF3-228ENST00000601291 CX3CL1P78423 397 aa17.93■□□□□ 0.46
IRF3-228ENST00000601291 SSBP2P81877 361 aaPredicted RBP17.93■□□□□ 0.46
IRF3-228ENST00000601291 SCGB2A2Q13296 93 aa17.93■□□□□ 0.46
IRF3-228ENST00000601291 SSMEM1Q8WWF3 244 aa17.93■□□□□ 0.46
IRF3-228ENST00000601291 ARPC1AQ92747 370 aa17.93■□□□□ 0.46
IRF3-228ENST00000601291 ZNF48Q96MX3 618 aaPredicted RBP17.93■□□□□ 0.46
IRF3-228ENST00000601291 SRSF8Q9BRL6 282 aaKnown RBP17.93■□□□□ 0.46
IRF3-228ENST00000601291 A0A1B0GW64 132 aa17.92■□□□□ 0.46
IRF3-228ENST00000601291 NPY1RP25929 384 aa17.92■□□□□ 0.46
IRF3-228ENST00000601291 ATP5IP56385 69 aaPredicted RBP17.92■□□□□ 0.46
IRF3-228ENST00000601291 RAB11AP62491 216 aa17.92■□□□□ 0.46
IRF3-228ENST00000601291 HBG1P69891 147 aa17.92■□□□□ 0.46
IRF3-228ENST00000601291 HBG2P69892 147 aa17.92■□□□□ 0.46
IRF3-228ENST00000601291 CLEC9AQ6UXN8 241 aa17.92■□□□□ 0.46
IRF3-228ENST00000601291 TMEM217Q8N7C4 229 aa17.92■□□□□ 0.46
IRF3-228ENST00000601291 TMUB1Q9BVT8 246 aa17.92■□□□□ 0.46
IRF3-228ENST00000601291 FBXL17Q9UF56 701 aa17.92■□□□□ 0.46
IRF3-228ENST00000601291 TET2Q6N021 2002 aaPredicted RBP17.92■□□□□ 0.46
IRF3-228ENST00000601291 ZANQ9Y493 2812 aa17.92■□□□□ 0.46
IRF3-228ENST00000601291 C15orf62A8K5M9 175 aa17.91■□□□□ 0.46
IRF3-228ENST00000601291 LY6G6DO95868 133 aa17.91■□□□□ 0.46
IRF3-228ENST00000601291 OR13C7P0DN81 318 aa17.91■□□□□ 0.46
IRF3-228ENST00000601291 WT1-ASQ06250 92 aa17.91■□□□□ 0.46
IRF3-228ENST00000601291 OR1S2Q8NGQ3 325 aa17.91■□□□□ 0.46
IRF3-228ENST00000601291 ABHD5Q8WTS1 349 aa17.91■□□□□ 0.46
IRF3-228ENST00000601291 SMR3AQ99954 134 aa17.91■□□□□ 0.46
IRF3-228ENST00000601291 MYO9AB2RTY4 2548 aa17.91■□□□□ 0.46
IRF3-228ENST00000601291 IGLC7A0M8Q6 106 aa17.91■□□□□ 0.46
IRF3-228ENST00000601291 TEX22C9J3V5 150 aa17.91■□□□□ 0.46
IRF3-228ENST00000601291 OR5C1Q8NGR4 320 aa17.91■□□□□ 0.46
IRF3-228ENST00000601291 SMIM3Q9BZL3 60 aa17.91■□□□□ 0.46
IRF3-228ENST00000601291 IGHV7-81A0A0B4J1V7 117 aa17.9■□□□□ 0.46
IRF3-228ENST00000601291 SUB1P53999 127 aaKnown RBP eCLIP17.9■□□□□ 0.46
IRF3-228ENST00000601291 OR8G2PQ6IF36 304 aa17.9■□□□□ 0.46
IRF3-228ENST00000601291 STPG2Q8N412 459 aa17.9■□□□□ 0.46
IRF3-228ENST00000601291 OR10P1Q8NGE3 313 aa17.9■□□□□ 0.46
IRF3-228ENST00000601291 ZNF471Q9BX82 626 aaPredicted RBP17.9■□□□□ 0.46
IRF3-228ENST00000601291 VPREB3Q9UKI3 123 aa17.9■□□□□ 0.46
IRF3-228ENST00000601291 SVEP1Q4LDE5 3571 aa17.9■□□□□ 0.46
IRF3-228ENST00000601291 ZNF469Q96JG9 3925 aaPredicted RBP17.89■□□□□ 0.46
IRF3-228ENST00000601291 NOTCH2Q04721 2471 aa17.89■□□□□ 0.46
IRF3-228ENST00000601291 BSXQ3C1V8 233 aa17.89■□□□□ 0.45
IRF3-228ENST00000601291 C2orf83Q53S99 150 aa17.89■□□□□ 0.45
IRF3-228ENST00000601291 RBMS3Q6XE24 437 aaKnown RBP17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms