RNA–Protein interactions for RNA: ENST00000600523.5

SRRM1-223, Transcript of serine and arginine repetitive matrix 1, human

TSL 5

Gene SRRM1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRRM1-223	ENST00000600523	LSM10	Q969L4	123 aa	Known RBP	10.13	□□□□□ -0.79
SRRM1-223	ENST00000600523	OR5B12	Q96R08	314 aa		10.13	□□□□□ -0.79
SRRM1-223	ENST00000600523	MCRIP2	Q9BUT9	160 aa	Known RBP	10.13	□□□□□ -0.79
SRRM1-223	ENST00000600523	ANK2	Q01484	3957 aa		10.13	□□□□□ -0.79
SRRM1-223	ENST00000600523	TEX50	A0A1B0GTY4	177 aa		10.12	□□□□□ -0.79
SRRM1-223	ENST00000600523	TEX22	C9J3V5	150 aa		10.12	□□□□□ -0.79
SRRM1-223	ENST00000600523	IFNA17	P01571	189 aa		10.12	□□□□□ -0.79
SRRM1-223	ENST00000600523	LGALS1	P09382	135 aa	Known RBP	10.12	□□□□□ -0.79
SRRM1-223	ENST00000600523	CCR6	P51684	374 aa		10.12	□□□□□ -0.79
SRRM1-223	ENST00000600523	UBE2M	P61081	183 aa	Known RBP	10.12	□□□□□ -0.79
SRRM1-223	ENST00000600523	RHOG	P84095	191 aa		10.12	□□□□□ -0.79
SRRM1-223	ENST00000600523	ATP5G2	Q06055	141 aa		10.12	□□□□□ -0.79
SRRM1-223	ENST00000600523	ZNF616	Q08AN1	781 aa		10.12	□□□□□ -0.79
SRRM1-223	ENST00000600523	ASPHD1	Q5U4P2	390 aa		10.12	□□□□□ -0.79
SRRM1-223	ENST00000600523	MZT2B	Q6NZ67	158 aa		10.12	□□□□□ -0.79
SRRM1-223	ENST00000600523	OR11H1	Q8NG94	326 aa		10.12	□□□□□ -0.79
SRRM1-223	ENST00000600523	OR1N2	Q8NGR9	330 aa		10.12	□□□□□ -0.79
SRRM1-223	ENST00000600523	GLYATL2	Q8WU03	294 aa		10.12	□□□□□ -0.79
SRRM1-223	ENST00000600523	SDHC	Q99643	169 aa	Predicted RBP	10.12	□□□□□ -0.79
SRRM1-223	ENST00000600523	ENY2	Q9NPA8	101 aa		10.12	□□□□□ -0.79
SRRM1-223	ENST00000600523	TMEM14B	Q9NUH8	114 aa		10.12	□□□□□ -0.79
SRRM1-223	ENST00000600523	NSG2	Q9Y328	171 aa		10.12	□□□□□ -0.79
SRRM1-223	ENST00000600523	LYRM1	O43325	122 aa		10.11	□□□□□ -0.79
SRRM1-223	ENST00000600523	NDUFB6	O95139	128 aa		10.11	□□□□□ -0.79
SRRM1-223	ENST00000600523	IGKV1-39	P01597	117 aa		10.11	□□□□□ -0.79
SRRM1-223	ENST00000600523	IGHV3-11	P01762	117 aa		10.11	□□□□□ -0.79
SRRM1-223	ENST00000600523	IGKV1D-39	P04432	117 aa		10.11	□□□□□ -0.79
SRRM1-223	ENST00000600523	HSPB1	P04792	205 aa	Known RBP	10.11	□□□□□ -0.79
SRRM1-223	ENST00000600523	CRYGC	P07315	174 aa		10.11	□□□□□ -0.79
SRRM1-223	ENST00000600523	OR13C7	P0DN81	318 aa		10.11	□□□□□ -0.79
SRRM1-223	ENST00000600523	HSPE1	P61604	102 aa	Known RBP	10.11	□□□□□ -0.79
SRRM1-223	ENST00000600523	ERH	P84090	104 aa	Known RBP	10.11	□□□□□ -0.79
SRRM1-223	ENST00000600523	DEFB136	Q30KP8	78 aa		10.11	□□□□□ -0.79
SRRM1-223	ENST00000600523	ZNF429	Q86V71	674 aa		10.11	□□□□□ -0.79
SRRM1-223	ENST00000600523	SLC35G3	Q8N808	338 aa		10.11	□□□□□ -0.79
SRRM1-223	ENST00000600523	RCC1L	Q96I51	464 aa	Known RBP	10.11	□□□□□ -0.79
SRRM1-223	ENST00000600523	RAX2	Q96IS3	184 aa		10.11	□□□□□ -0.79
SRRM1-223	ENST00000600523	GNB4	Q9HAV0	340 aa		10.11	□□□□□ -0.79
SRRM1-223	ENST00000600523	PLEKHA3	Q9HB20	300 aa		10.11	□□□□□ -0.79
SRRM1-223	ENST00000600523	RANGRF	Q9HD47	186 aa	Predicted RBP	10.11	□□□□□ -0.79
SRRM1-223	ENST00000600523	NDUFA4L2	Q9NRX3	87 aa		10.11	□□□□□ -0.79
SRRM1-223	ENST00000600523	CTNNBIP1	Q9NSA3	81 aa	Predicted RBP	10.11	□□□□□ -0.79
SRRM1-223	ENST00000600523	TMEM56-RWDD3	S4R434	201 aa		10.11	□□□□□ -0.79
SRRM1-223	ENST00000600523	PLXNB1	O43157	2135 aa		10.1	□□□□□ -0.79
SRRM1-223	ENST00000600523	LINC01619	G3V211	115 aa		10.1	□□□□□ -0.79
SRRM1-223	ENST00000600523	IGKV1-5	P01602	117 aa		10.1	□□□□□ -0.79
SRRM1-223	ENST00000600523	MYOD1	P15172	320 aa		10.1	□□□□□ -0.79
SRRM1-223	ENST00000600523	AREG	P15514	252 aa		10.1	□□□□□ -0.79
SRRM1-223	ENST00000600523	CTRB1	P17538	263 aa		10.1	□□□□□ -0.79
SRRM1-223	ENST00000600523	ZP3	P21754	424 aa		10.1	□□□□□ -0.79
SRRM1-223	ENST00000600523	KIAA0141	Q14154	515 aa	Predicted RBP	10.1	□□□□□ -0.79
SRRM1-223	ENST00000600523	CTRB2	Q6GPI1	263 aa		10.1	□□□□□ -0.79
SRRM1-223	ENST00000600523	C18orf65	Q6ZTR6	163 aa		10.1	□□□□□ -0.79
SRRM1-223	ENST00000600523	SELENOH	Q8IZQ5	122 aa	Known RBP	10.1	□□□□□ -0.79
SRRM1-223	ENST00000600523	TMEM230	Q96A57	120 aa		10.1	□□□□□ -0.79
SRRM1-223	ENST00000600523	CXorf58	Q96LI9	332 aa		10.1	□□□□□ -0.79
SRRM1-223	ENST00000600523	P2RX4	Q99571	388 aa		10.1	□□□□□ -0.79
SRRM1-223	ENST00000600523	FBXL7	Q9UJT9	491 aa		10.1	□□□□□ -0.79
SRRM1-223	ENST00000600523		A0A0B4J2A0	478 aa		10.09	□□□□□ -0.79
SRRM1-223	ENST00000600523	DUXB	A0A1W2PPF3	345 aa		10.09	□□□□□ -0.79
SRRM1-223	ENST00000600523	IGLC7	A0M8Q6	106 aa		10.09	□□□□□ -0.79
SRRM1-223	ENST00000600523		E7EUB6	86 aa		10.09	□□□□□ -0.79
SRRM1-223	ENST00000600523		I3L521	148 aa		10.09	□□□□□ -0.79
SRRM1-223	ENST00000600523	OR2J3	O76001	311 aa		10.09	□□□□□ -0.79
SRRM1-223	ENST00000600523	REG1A	P05451	166 aa		10.09	□□□□□ -0.79
SRRM1-223	ENST00000600523	SULT1A3	P0DMM9	295 aa		10.09	□□□□□ -0.79
SRRM1-223	ENST00000600523	SULT1A4	P0DMN0	295 aa		10.09	□□□□□ -0.79
SRRM1-223	ENST00000600523	SNCA	P37840	140 aa		10.09	□□□□□ -0.79
SRRM1-223	ENST00000600523	SUB1	P53999	127 aa	Known RBP eCLIP	10.09	□□□□□ -0.79
SRRM1-223	ENST00000600523	PRCD	Q00LT1	54 aa		10.09	□□□□□ -0.79
SRRM1-223	ENST00000600523	TMEM187	Q14656	261 aa		10.09	□□□□□ -0.79
SRRM1-223	ENST00000600523	TATDN3	Q17R31	274 aa		10.09	□□□□□ -0.79
SRRM1-223	ENST00000600523	C15orf32	Q32M92	178 aa		10.09	□□□□□ -0.79
SRRM1-223	ENST00000600523	C4orf46	Q504U0	113 aa		10.09	□□□□□ -0.79
SRRM1-223	ENST00000600523	LINC00482	Q8N8I6	264 aa		10.09	□□□□□ -0.79
SRRM1-223	ENST00000600523	WFDC9	Q8NEX5	89 aa		10.09	□□□□□ -0.79
SRRM1-223	ENST00000600523	OR10W1	Q8NGF6	305 aa		10.09	□□□□□ -0.79
SRRM1-223	ENST00000600523	EEF1AKMT3	Q96AZ1	226 aa		10.09	□□□□□ -0.79
SRRM1-223	ENST00000600523	PEF1	Q9UBV8	284 aa	Known RBP	10.09	□□□□□ -0.79
SRRM1-223	ENST00000600523	ZMAT5	Q9UDW3	170 aa	Known RBP	10.09	□□□□□ -0.79
SRRM1-223	ENST00000600523	SHPK	Q9UHJ6	478 aa		10.09	□□□□□ -0.79
SRRM1-223	ENST00000600523	DNHD1	Q96M86	4753 aa		10.08	□□□□□ -0.8
SRRM1-223	ENST00000600523	TRBV9	A0A0B4J1U6	114 aa		10.08	□□□□□ -0.8
SRRM1-223	ENST00000600523	FAM240B	A0A1B0GVZ2	78 aa		10.08	□□□□□ -0.8
SRRM1-223	ENST00000600523	HLA-A	P01891	365 aa	Known RBP	10.08	□□□□□ -0.8
SRRM1-223	ENST00000600523	PRH1	P02810	166 aa		10.08	□□□□□ -0.8
SRRM1-223	ENST00000600523	HOXA1	P49639	335 aa	Predicted RBP	10.08	□□□□□ -0.8
SRRM1-223	ENST00000600523	DEFA1	P59665	94 aa		10.08	□□□□□ -0.8
SRRM1-223	ENST00000600523	DEFA3	P59666	94 aa		10.08	□□□□□ -0.8
SRRM1-223	ENST00000600523	EXOSC2	Q13868	293 aa	Known RBP	10.08	□□□□□ -0.8
SRRM1-223	ENST00000600523	SLC25A24	Q6NUK1	477 aa		10.08	□□□□□ -0.8
SRRM1-223	ENST00000600523	ETV3L	Q6ZN32	361 aa		10.08	□□□□□ -0.8
SRRM1-223	ENST00000600523	COQ8A	Q8NI60	647 aa		10.08	□□□□□ -0.8
SRRM1-223	ENST00000600523	DUX3	Q96PT4	197 aa		10.08	□□□□□ -0.8
SRRM1-223	ENST00000600523	TNC	P24821	2201 aa		10.07	□□□□□ -0.8
SRRM1-223	ENST00000600523	TRBV7-1	A0A0A6YYK4	115 aa		10.07	□□□□□ -0.8
SRRM1-223	ENST00000600523		A0A0B4J293	547 aa		10.07	□□□□□ -0.8
SRRM1-223	ENST00000600523	ANKRD34B	A5PLL1	514 aa		10.07	□□□□□ -0.8
SRRM1-223	ENST00000600523	ST8SIA3	O43173	380 aa		10.07	□□□□□ -0.8
SRRM1-223	ENST00000600523	UPK1B	O75841	260 aa		10.07	□□□□□ -0.8

Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms