RNA–Protein interactions for RNA: ENST00000600012.5

UPF1-208, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 5

Gene UPF1, Length 501 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-208ENST00000600012 UBE2KP61086 200 aa10.02□□□□□ -0.81
UPF1-208ENST00000600012 POLR2GP62487 172 aaKnown RBP eCLIP10.02□□□□□ -0.81
UPF1-208ENST00000600012 PSG5Q15238 335 aa10.02□□□□□ -0.81
UPF1-208ENST00000600012 VMA21Q3ZAQ7 101 aa10.02□□□□□ -0.81
UPF1-208ENST00000600012 SPINK9Q5DT21 86 aa10.02□□□□□ -0.81
UPF1-208ENST00000600012 OR2T10Q8NGZ9 312 aa10.02□□□□□ -0.81
UPF1-208ENST00000600012 THAP6Q8TBB0 222 aa10.02□□□□□ -0.81
UPF1-208ENST00000600012 TSNAXQ99598 290 aaKnown RBP10.02□□□□□ -0.81
UPF1-208ENST00000600012 AIFM2Q9BRQ8 373 aa10.02□□□□□ -0.81
UPF1-208ENST00000600012 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.02□□□□□ -0.81
UPF1-208ENST00000600012 COA4Q9NYJ1 87 aa10.02□□□□□ -0.81
UPF1-208ENST00000600012 PITPNC1Q9UKF7 332 aa10.02□□□□□ -0.81
UPF1-208ENST00000600012 WRBO00258 174 aa10.01□□□□□ -0.81
UPF1-208ENST00000600012 DEDDO75618 318 aa10.01□□□□□ -0.81
UPF1-208ENST00000600012 SNAPC5O75971 98 aa10.01□□□□□ -0.81
UPF1-208ENST00000600012 CRYGBP07316 175 aa10.01□□□□□ -0.81
UPF1-208ENST00000600012 IL6RP08887 468 aaPredicted RBP10.01□□□□□ -0.81
UPF1-208ENST00000600012 CD28P10747 220 aa10.01□□□□□ -0.81
UPF1-208ENST00000600012 IAPPP10997 89 aa10.01□□□□□ -0.81
UPF1-208ENST00000600012 TMEM11P17152 192 aa10.01□□□□□ -0.81
UPF1-208ENST00000600012 LGALS7P47929 136 aa10.01□□□□□ -0.81
UPF1-208ENST00000600012 F2RL1P55085 397 aa10.01□□□□□ -0.81
UPF1-208ENST00000600012 ID3Q02535 119 aa10.01□□□□□ -0.81
UPF1-208ENST00000600012 FGL1Q08830 312 aa10.01□□□□□ -0.81
UPF1-208ENST00000600012 EBI3Q14213 229 aa10.01□□□□□ -0.81
UPF1-208ENST00000600012 MMDQ15546 238 aa10.01□□□□□ -0.81
UPF1-208ENST00000600012 PRSS54Q6PEW0 395 aa10.01□□□□□ -0.81
UPF1-208ENST00000600012 Q8N6K4 173 aa10.01□□□□□ -0.81
UPF1-208ENST00000600012 TMEM167AQ8TBQ9 72 aa10.01□□□□□ -0.81
UPF1-208ENST00000600012 WIPF2Q8TF74 440 aaPredicted RBP10.01□□□□□ -0.81
UPF1-208ENST00000600012 DCUN1D4Q92564 292 aa10.01□□□□□ -0.81
UPF1-208ENST00000600012 RNF126Q9BV68 326 aa10.01□□□□□ -0.81
UPF1-208ENST00000600012 PRSS22Q9GZN4 317 aa10.01□□□□□ -0.81
UPF1-208ENST00000600012 FBXL15Q9H469 300 aa10.01□□□□□ -0.81
UPF1-208ENST00000600012 A6NDX4 124 aa10□□□□□ -0.81
UPF1-208ENST00000600012 NBR2O15453 112 aa10□□□□□ -0.81
UPF1-208ENST00000600012 SPDEFO95238 335 aa10□□□□□ -0.81
UPF1-208ENST00000600012 PET100P0DJ07 73 aa10□□□□□ -0.81
UPF1-208ENST00000600012 SLC25A4P12235 298 aa10□□□□□ -0.81
UPF1-208ENST00000600012 TNFRSF9Q07011 255 aa10□□□□□ -0.81
UPF1-208ENST00000600012 PJVKQ0ZLH3 352 aa10□□□□□ -0.81
UPF1-208ENST00000600012 MRGPRG-AS1Q2M3A8 158 aa10□□□□□ -0.81
UPF1-208ENST00000600012 TEX45Q8NA69 505 aa10□□□□□ -0.81
UPF1-208ENST00000600012 VSTM2AQ8TAG5 236 aa10□□□□□ -0.81
UPF1-208ENST00000600012 CLCC1Q96S66 551 aa10□□□□□ -0.81
UPF1-208ENST00000600012 RNF5Q99942 180 aa10□□□□□ -0.81
UPF1-208ENST00000600012 CITED2Q99967 270 aaPredicted RBP10□□□□□ -0.81
UPF1-208ENST00000600012 WNT10AQ9GZT5 417 aa10□□□□□ -0.81
UPF1-208ENST00000600012 RBKSQ9H477 322 aa10□□□□□ -0.81
UPF1-208ENST00000600012 ZNF430Q9H8G1 570 aaPredicted RBP10□□□□□ -0.81
UPF1-208ENST00000600012 AURKAIP1Q9NWT8 199 aaPredicted RBP10□□□□□ -0.81
UPF1-208ENST00000600012 METTL1Q9UBP6 276 aaKnown RBP10□□□□□ -0.81
UPF1-208ENST00000600012 HSPB7Q9UBY9 170 aa10□□□□□ -0.81
UPF1-208ENST00000600012 PRNDQ9UKY0 176 aa10□□□□□ -0.81
UPF1-208ENST00000600012 FOXA2Q9Y261 457 aaPredicted RBP10□□□□□ -0.81
UPF1-208ENST00000600012 OR51B2Q9Y5P1 312 aa10□□□□□ -0.81
UPF1-208ENST00000600012 ADARB2-AS1A8MUL3 147 aa9.99□□□□□ -0.81
UPF1-208ENST00000600012 FAM90A26D6RGX4 464 aa9.99□□□□□ -0.81
UPF1-208ENST00000600012 RRHO14718 337 aa9.99□□□□□ -0.81
UPF1-208ENST00000600012 ARPC5O15511 151 aa9.99□□□□□ -0.81
UPF1-208ENST00000600012 SYNGR2O43760 224 aa9.99□□□□□ -0.81
UPF1-208ENST00000600012 OR2F2O95006 317 aa9.99□□□□□ -0.81
UPF1-208ENST00000600012 NDUFA3O95167 84 aa9.99□□□□□ -0.81
UPF1-208ENST00000600012 IFNA17P01571 189 aa9.99□□□□□ -0.81
UPF1-208ENST00000600012 RLN2P04090 185 aa9.99□□□□□ -0.81
UPF1-208ENST00000600012 FAM106CPP0CH98 169 aa9.99□□□□□ -0.81
UPF1-208ENST00000600012 LYL1P12980 280 aa9.99□□□□□ -0.81
UPF1-208ENST00000600012 DYNLT3P51808 116 aa9.99□□□□□ -0.81
UPF1-208ENST00000600012 RPL8P62917 257 aaKnown RBP9.99□□□□□ -0.81
UPF1-208ENST00000600012 PLGLAQ15195 96 aa9.99□□□□□ -0.81
UPF1-208ENST00000600012 AARDQ4LEZ3 155 aa9.99□□□□□ -0.81
UPF1-208ENST00000600012 ARSJQ5FYB0 599 aaPredicted RBP9.99□□□□□ -0.81
UPF1-208ENST00000600012 C10orf55Q5SWW7 151 aa9.99□□□□□ -0.81
UPF1-208ENST00000600012 TMEM219Q86XT9 240 aa9.99□□□□□ -0.81
UPF1-208ENST00000600012 THNSL2Q86YJ6 484 aa9.99□□□□□ -0.81
UPF1-208ENST00000600012 NPBQ8NG41 125 aa9.99□□□□□ -0.81
UPF1-208ENST00000600012 OR4A5Q8NH83 315 aa9.99□□□□□ -0.81
UPF1-208ENST00000600012 HYLS1Q96M11 299 aa9.99□□□□□ -0.81
UPF1-208ENST00000600012 C11orf1Q9H5F2 150 aa9.99□□□□□ -0.81
UPF1-208ENST00000600012 ZFP57Q9NU63 452 aa9.99□□□□□ -0.81
UPF1-208ENST00000600012 TMEM14BQ9NUH8 114 aa9.99□□□□□ -0.81
UPF1-208ENST00000600012 KIAA1456Q9P272 454 aa9.99□□□□□ -0.81
UPF1-208ENST00000600012 MSGN1A6NI15 193 aa9.98□□□□□ -0.81
UPF1-208ENST00000600012 NCBP2LA6PVI3 153 aaKnown RBP9.98□□□□□ -0.81
UPF1-208ENST00000600012 CEBPZOSA8MTT3 80 aa9.98□□□□□ -0.81
UPF1-208ENST00000600012 H3BP45 60 aa9.98□□□□□ -0.81
UPF1-208ENST00000600012 L7N2F9 121 aa9.98□□□□□ -0.81
UPF1-208ENST00000600012 TMEM50AO95807 157 aa9.98□□□□□ -0.81
UPF1-208ENST00000600012 GNB1P62873 340 aa9.98□□□□□ -0.81
UPF1-208ENST00000600012 VAMP2P63027 116 aa9.98□□□□□ -0.81
UPF1-208ENST00000600012 TNXAQ16473 311 aa9.98□□□□□ -0.81
UPF1-208ENST00000600012 PRSS8Q16651 343 aa9.98□□□□□ -0.81
UPF1-208ENST00000600012 ZNF546Q86UE3 836 aa9.98□□□□□ -0.81
UPF1-208ENST00000600012 ZNF429Q86V71 674 aa9.98□□□□□ -0.81
UPF1-208ENST00000600012 MMD2Q8IY49 270 aa9.98□□□□□ -0.81
UPF1-208ENST00000600012 C9orf62Q8N4C0 152 aa9.98□□□□□ -0.81
UPF1-208ENST00000600012 HINT2Q9BX68 163 aa9.98□□□□□ -0.81
UPF1-208ENST00000600012 PLSCR3Q9NRY6 295 aa9.98□□□□□ -0.81
UPF1-208ENST00000600012 TNFSF18Q9UNG2 199 aa9.98□□□□□ -0.81
UPF1-208ENST00000600012 TEX50A0A1B0GTY4 177 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms