RNA–Protein interactions for RNA: ENST00000598020.3

PNKP-211, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-211ENST00000598020 TMEM268Q5VZI3 342 aa15.81■□□□□ 0.12
PNKP-211ENST00000598020 LGI3Q8N145 548 aa15.81■□□□□ 0.12
PNKP-211ENST00000598020 KLK9Q9UKQ9 250 aa15.81■□□□□ 0.12
PNKP-211ENST00000598020 A0A0B4J293 547 aa15.8■□□□□ 0.12
PNKP-211ENST00000598020 A0A0B4J2A0 478 aa15.8■□□□□ 0.12
PNKP-211ENST00000598020 IGLC7A0M8Q6 106 aa15.8■□□□□ 0.12
PNKP-211ENST00000598020 PSMB6P28072 239 aa15.8■□□□□ 0.12
PNKP-211ENST00000598020 RUNX1Q01196 453 aa15.8■□□□□ 0.12
PNKP-211ENST00000598020 PPP1R1AQ13522 171 aa15.8■□□□□ 0.12
PNKP-211ENST00000598020 AARDQ4LEZ3 155 aa15.8■□□□□ 0.12
PNKP-211ENST00000598020 MZT2BQ6NZ67 158 aa15.8■□□□□ 0.12
PNKP-211ENST00000598020 C18orf65Q6ZTR6 163 aa15.8■□□□□ 0.12
PNKP-211ENST00000598020 LRTM2Q8N967 370 aa15.8■□□□□ 0.12
PNKP-211ENST00000598020 KLHL30-AS1Q8NEE0 82 aa15.8■□□□□ 0.12
PNKP-211ENST00000598020 C4orf3Q8WVX3 66 aa15.8■□□□□ 0.12
PNKP-211ENST00000598020 MS4A10Q96PG2 267 aa15.8■□□□□ 0.12
PNKP-211ENST00000598020 ZNF355PQ9NSJ1 428 aa15.8■□□□□ 0.12
PNKP-211ENST00000598020 COA4Q9NYJ1 87 aa15.8■□□□□ 0.12
PNKP-211ENST00000598020 SHPKQ9UHJ6 478 aa15.8■□□□□ 0.12
PNKP-211ENST00000598020 FLVCR2Q9UPI3 526 aa15.8■□□□□ 0.12
PNKP-211ENST00000598020 TRBV9A0A0B4J1U6 114 aa15.79■□□□□ 0.12
PNKP-211ENST00000598020 A0A0G2JRQ6 117 aa15.79■□□□□ 0.12
PNKP-211ENST00000598020 TRGV3P03979 118 aa15.79■□□□□ 0.12
PNKP-211ENST00000598020 TCRBP04435 133 aa15.79■□□□□ 0.12
PNKP-211ENST00000598020 AREGP15514 252 aa15.79■□□□□ 0.12
PNKP-211ENST00000598020 CTRB1P17538 263 aa15.79■□□□□ 0.12
PNKP-211ENST00000598020 TPPP2P59282 170 aa15.79■□□□□ 0.12
PNKP-211ENST00000598020 HSPE1P61604 102 aaKnown RBP15.79■□□□□ 0.12
PNKP-211ENST00000598020 IZUMO4Q1ZYL8 232 aa15.79■□□□□ 0.12
PNKP-211ENST00000598020 CTRB2Q6GPI1 263 aa15.79■□□□□ 0.12
PNKP-211ENST00000598020 CASTOR1Q8WTX7 329 aa15.79■□□□□ 0.12
PNKP-211ENST00000598020 ALX4Q9H161 411 aaPredicted RBP15.79■□□□□ 0.12
PNKP-211ENST00000598020 DUXBA0A1W2PPF3 345 aa15.78■□□□□ 0.12
PNKP-211ENST00000598020 NUDT19A8MXV4 375 aa15.78■□□□□ 0.12
PNKP-211ENST00000598020 VAMP1P23763 118 aa15.78■□□□□ 0.12
PNKP-211ENST00000598020 TREML4Q6UXN2 200 aa15.78■□□□□ 0.12
PNKP-211ENST00000598020 Q6ZRM9 215 aa15.78■□□□□ 0.12
PNKP-211ENST00000598020 C8orf86Q6ZUL3 223 aa15.78■□□□□ 0.12
PNKP-211ENST00000598020 SLC35G3Q8N808 338 aa15.78■□□□□ 0.12
PNKP-211ENST00000598020 RNASE11Q8TAA1 199 aaKnown RBP15.78■□□□□ 0.12
PNKP-211ENST00000598020 GNB4Q9HAV0 340 aa15.78■□□□□ 0.12
PNKP-211ENST00000598020 PRR13Q9NZ81 148 aa15.78■□□□□ 0.12
PNKP-211ENST00000598020 MGAM2Q2M2H8 2515 aa15.78■□□□□ 0.12
PNKP-211ENST00000598020 VWFP04275 2813 aa15.78■□□□□ 0.12
PNKP-211ENST00000598020 A0A0G2JLM5 398 aa15.77■□□□□ 0.12
PNKP-211ENST00000598020 FAM240BA0A1B0GVZ2 78 aa15.77■□□□□ 0.12
PNKP-211ENST00000598020 I3L521 148 aa15.77■□□□□ 0.12
PNKP-211ENST00000598020 DHFRP00374 187 aa15.77■□□□□ 0.12
PNKP-211ENST00000598020 OR4E1P0C645 316 aa15.77■□□□□ 0.12
PNKP-211ENST00000598020 PRCDQ00LT1 54 aa15.77■□□□□ 0.12
PNKP-211ENST00000598020 WT1-ASQ06250 92 aa15.77■□□□□ 0.12
PNKP-211ENST00000598020 ANKRD55Q3KP44 614 aa15.77■□□□□ 0.12
PNKP-211ENST00000598020 OR10W1Q8NGF6 305 aa15.77■□□□□ 0.12
PNKP-211ENST00000598020 GPR146Q96CH1 333 aa15.77■□□□□ 0.12
PNKP-211ENST00000598020 USMG5Q96IX5 58 aa15.77■□□□□ 0.12
PNKP-211ENST00000598020 C20orf85Q9H1P6 137 aa15.77■□□□□ 0.12
PNKP-211ENST00000598020 C9orf170A2RU37 121 aa15.76■□□□□ 0.11
PNKP-211ENST00000598020 RBMXL2O75526 392 aaKnown RBP15.76■□□□□ 0.11
PNKP-211ENST00000598020 MYCNOSP40205 109 aa15.76■□□□□ 0.11
PNKP-211ENST00000598020 MECP2P51608 486 aaKnown RBP15.76■□□□□ 0.11
PNKP-211ENST00000598020 RAB25P57735 213 aa15.76■□□□□ 0.11
PNKP-211ENST00000598020 NMSQ5H8A3 153 aa15.76■□□□□ 0.11
PNKP-211ENST00000598020 ETV3LQ6ZN32 361 aa15.76■□□□□ 0.11
PNKP-211ENST00000598020 LYZL2Q7Z4W2 148 aa15.76■□□□□ 0.11
PNKP-211ENST00000598020 NECAP1Q8NC96 275 aa15.76■□□□□ 0.11
PNKP-211ENST00000598020 OR52E5Q8NH55 327 aa15.76■□□□□ 0.11
PNKP-211ENST00000598020 P2RX4Q99571 388 aa15.76■□□□□ 0.11
PNKP-211ENST00000598020 CTNNBIP1Q9NSA3 81 aaPredicted RBP15.76■□□□□ 0.11
PNKP-211ENST00000598020 FAM223BA6NKX1 122 aa15.75■□□□□ 0.11
PNKP-211ENST00000598020 INS-IGF2F8WCM5 200 aa15.75■□□□□ 0.11
PNKP-211ENST00000598020 ST8SIA3O43173 380 aa15.75■□□□□ 0.11
PNKP-211ENST00000598020 LGALS1P09382 135 aaKnown RBP15.75■□□□□ 0.11
PNKP-211ENST00000598020 OR13C7P0DN81 318 aa15.75■□□□□ 0.11
PNKP-211ENST00000598020 HIST1H1BP16401 226 aaKnown RBP15.75■□□□□ 0.11
PNKP-211ENST00000598020 ANXA7P20073 488 aaKnown RBP15.75■□□□□ 0.11
PNKP-211ENST00000598020 DHRS2Q13268 280 aa15.75■□□□□ 0.11
PNKP-211ENST00000598020 LYG2Q86SG7 212 aa15.75■□□□□ 0.11
PNKP-211ENST00000598020 FAM223AQ8IWN6 122 aa15.75■□□□□ 0.11
PNKP-211ENST00000598020 MRPL41Q8IXM3 137 aaKnown RBP15.75■□□□□ 0.11
PNKP-211ENST00000598020 RAX2Q96IS3 184 aa15.75■□□□□ 0.11
PNKP-211ENST00000598020 FANCD2OSQ96PS1 177 aa15.75■□□□□ 0.11
PNKP-211ENST00000598020 HINT2Q9BX68 163 aa15.75■□□□□ 0.11
PNKP-211ENST00000598020 CACFD1Q9UGQ2 172 aa15.75■□□□□ 0.11
PNKP-211ENST00000598020 PKD1L1Q8TDX9 2849 aa15.74■□□□□ 0.11
PNKP-211ENST00000598020 C13orf42A0A1B0GVH6 325 aa15.74■□□□□ 0.11
PNKP-211ENST00000598020 CCL24O00175 119 aa15.74■□□□□ 0.11
PNKP-211ENST00000598020 DUS4LO95620 317 aaKnown RBP15.74■□□□□ 0.11
PNKP-211ENST00000598020 HLA-AP01891 365 aaKnown RBP15.74■□□□□ 0.11
PNKP-211ENST00000598020 PRH1P02810 166 aa15.74■□□□□ 0.11
PNKP-211ENST00000598020 RHOGP84095 191 aa15.74■□□□□ 0.11
PNKP-211ENST00000598020 FHL3Q13643 280 aa15.74■□□□□ 0.11
PNKP-211ENST00000598020 PDLIM3Q53GG5 364 aaPredicted RBP15.74■□□□□ 0.11
PNKP-211ENST00000598020 DUSP18Q8NEJ0 188 aa15.74■□□□□ 0.11
PNKP-211ENST00000598020 WFDC9Q8NEX5 89 aa15.74■□□□□ 0.11
PNKP-211ENST00000598020 NUDT15Q9NV35 164 aa15.74■□□□□ 0.11
PNKP-211ENST00000598020 CACNG5Q9UF02 275 aa15.74■□□□□ 0.11
PNKP-211ENST00000598020 IGLV11-55A0A075B6I3 123 aa15.73■□□□□ 0.11
PNKP-211ENST00000598020 PF4P02776 101 aa15.73■□□□□ 0.11
PNKP-211ENST00000598020 REG1AP05451 166 aa15.73■□□□□ 0.11
PNKP-211ENST00000598020 SULT1A3P0DMM9 295 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms