RNA–Protein interactions for RNA: ENST00000595993.5

USHBP1-205, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-205ENST00000595993 AREGP15514 252 aa12.25□□□□□ -0.45
USHBP1-205ENST00000595993 OR2B8PP59922 312 aa12.25□□□□□ -0.45
USHBP1-205ENST00000595993 SP6Q3SY56 376 aa12.25□□□□□ -0.45
USHBP1-205ENST00000595993 CCDC71LQ8N9Z2 235 aa12.25□□□□□ -0.45
USHBP1-205ENST00000595993 RCHY1Q96PM5 261 aa12.25□□□□□ -0.45
USHBP1-205ENST00000595993 SLA2Q9H6Q3 261 aa12.25□□□□□ -0.45
USHBP1-205ENST00000595993 COA4Q9NYJ1 87 aa12.25□□□□□ -0.45
USHBP1-205ENST00000595993 COPZ2Q9P299 210 aa12.25□□□□□ -0.45
USHBP1-205ENST00000595993 NSG2Q9Y328 171 aa12.25□□□□□ -0.45
USHBP1-205ENST00000595993 SORL1Q92673 2214 aa12.25□□□□□ -0.45
USHBP1-205ENST00000595993 BRI3O95415 125 aa12.24□□□□□ -0.45
USHBP1-205ENST00000595993 LGALS1P09382 135 aaKnown RBP12.24□□□□□ -0.45
USHBP1-205ENST00000595993 AP3S2P59780 193 aa12.24□□□□□ -0.45
USHBP1-205ENST00000595993 ZNF45Q02386 682 aa12.24□□□□□ -0.45
USHBP1-205ENST00000595993 ZNF616Q08AN1 781 aa12.24□□□□□ -0.45
USHBP1-205ENST00000595993 ZNF429Q86V71 674 aa12.24□□□□□ -0.45
USHBP1-205ENST00000595993 TTC9CQ8N5M4 171 aa12.24□□□□□ -0.45
USHBP1-205ENST00000595993 OR1N2Q8NGR9 330 aa12.24□□□□□ -0.45
USHBP1-205ENST00000595993 TMEM230Q96A57 120 aa12.24□□□□□ -0.45
USHBP1-205ENST00000595993 SCP2D1Q9UJQ7 156 aa12.24□□□□□ -0.45
USHBP1-205ENST00000595993 C14orf166Q9Y224 244 aaKnown RBP12.24□□□□□ -0.45
USHBP1-205ENST00000595993 DBX1A6NMT0 343 aa12.23□□□□□ -0.45
USHBP1-205ENST00000595993 IGKV1-5P01602 117 aa12.23□□□□□ -0.45
USHBP1-205ENST00000595993 SERPINE2P07093 398 aa12.23□□□□□ -0.45
USHBP1-205ENST00000595993 FGF2P09038 288 aa12.23□□□□□ -0.45
USHBP1-205ENST00000595993 UCP1P25874 307 aa12.23□□□□□ -0.45
USHBP1-205ENST00000595993 CD40LGP29965 261 aa12.23□□□□□ -0.45
USHBP1-205ENST00000595993 FAUP35544 74 aaKnown RBP12.23□□□□□ -0.45
USHBP1-205ENST00000595993 IZUMO4Q1ZYL8 232 aa12.23□□□□□ -0.45
USHBP1-205ENST00000595993 CADM3Q8N126 398 aa12.23□□□□□ -0.45
USHBP1-205ENST00000595993 GDPD1Q8N9F7 314 aa12.23□□□□□ -0.45
USHBP1-205ENST00000595993 NAA60Q9H7X0 242 aa12.23□□□□□ -0.45
USHBP1-205ENST00000595993 IGHV4OR15-8A0A075B7B6 117 aa12.22□□□□□ -0.45
USHBP1-205ENST00000595993 A0A087WW49 117 aa12.22□□□□□ -0.45
USHBP1-205ENST00000595993 TEX50A0A1B0GTY4 177 aa12.22□□□□□ -0.45
USHBP1-205ENST00000595993 IGLC7A0M8Q6 106 aa12.22□□□□□ -0.45
USHBP1-205ENST00000595993 CRYM-AS1A6NIL9 109 aa12.22□□□□□ -0.45
USHBP1-205ENST00000595993 NPIPB5A8MRT5 1133 aa12.22□□□□□ -0.45
USHBP1-205ENST00000595993 REG1AP05451 166 aa12.22□□□□□ -0.45
USHBP1-205ENST00000595993 OR5AC1P0C628 307 aa12.22□□□□□ -0.45
USHBP1-205ENST00000595993 ZNF57Q68EA5 555 aaPredicted RBP12.22□□□□□ -0.45
USHBP1-205ENST00000595993 OR10W1Q8NGF6 305 aa12.22□□□□□ -0.45
USHBP1-205ENST00000595993 LHFPL5Q8TAF8 219 aa12.22□□□□□ -0.45
USHBP1-205ENST00000595993 COMMD5Q9GZQ3 224 aa12.22□□□□□ -0.45
USHBP1-205ENST00000595993 AKIP1Q9NQ31 210 aa12.22□□□□□ -0.45
USHBP1-205ENST00000595993 TRBV9A0A0B4J1U6 114 aa12.21□□□□□ -0.45
USHBP1-205ENST00000595993 A0A0G2JRQ6 117 aa12.21□□□□□ -0.45
USHBP1-205ENST00000595993 TEX13DA0A0J9YY54 714 aaPredicted RBP12.21□□□□□ -0.45
USHBP1-205ENST00000595993 LCE6AA0A183 80 aa12.21□□□□□ -0.45
USHBP1-205ENST00000595993 C15orf61A6NNL5 157 aa12.21□□□□□ -0.45
USHBP1-205ENST00000595993 CRYGCP07315 174 aa12.21□□□□□ -0.45
USHBP1-205ENST00000595993 FRMD6-AS1P0C7T7 363 aa12.21□□□□□ -0.45
USHBP1-205ENST00000595993 P0C879 139 aa12.21□□□□□ -0.45
USHBP1-205ENST00000595993 IL7P13232 177 aa12.21□□□□□ -0.45
USHBP1-205ENST00000595993 CTRB1P17538 263 aa12.21□□□□□ -0.45
USHBP1-205ENST00000595993 PSMB6P28072 239 aa12.21□□□□□ -0.45
USHBP1-205ENST00000595993 TRIM16LQ309B1 348 aa12.21□□□□□ -0.45
USHBP1-205ENST00000595993 TRIQKQ629K1 86 aa12.21□□□□□ -0.45
USHBP1-205ENST00000595993 CTRB2Q6GPI1 263 aa12.21□□□□□ -0.45
USHBP1-205ENST00000595993 H2BFWTQ7Z2G1 175 aa12.21□□□□□ -0.45
USHBP1-205ENST00000595993 GLYATL2Q8WU03 294 aa12.21□□□□□ -0.45
USHBP1-205ENST00000595993 DCUN1D4Q92564 292 aa12.21□□□□□ -0.45
USHBP1-205ENST00000595993 QTRT1Q9BXR0 403 aaKnown RBP12.21□□□□□ -0.45
USHBP1-205ENST00000595993 TMEM222Q9H0R3 208 aa12.21□□□□□ -0.45
USHBP1-205ENST00000595993 TMEM14BQ9NUH8 114 aa12.21□□□□□ -0.45
USHBP1-205ENST00000595993 ZNF257Q9Y2Q1 563 aa12.21□□□□□ -0.45
USHBP1-205ENST00000595993 C13orf42A0A1B0GVH6 325 aa12.2□□□□□ -0.46
USHBP1-205ENST00000595993 OVOL1O14753 267 aa12.2□□□□□ -0.46
USHBP1-205ENST00000595993 SNAPC5O75971 98 aa12.2□□□□□ -0.46
USHBP1-205ENST00000595993 LY86O95711 162 aa12.2□□□□□ -0.46
USHBP1-205ENST00000595993 RHOGP84095 191 aa12.2□□□□□ -0.46
USHBP1-205ENST00000595993 WT1-ASQ06250 92 aa12.2□□□□□ -0.46
USHBP1-205ENST00000595993 SLC25A42Q86VD7 318 aa12.2□□□□□ -0.46
USHBP1-205ENST00000595993 OR1L8Q8NGR8 309 aa12.2□□□□□ -0.46
USHBP1-205ENST00000595993 DEDD2Q8WXF8 326 aa12.2□□□□□ -0.46
USHBP1-205ENST00000595993 FANCD2OSQ96PS1 177 aa12.2□□□□□ -0.46
USHBP1-205ENST00000595993 CITED4Q96RK1 184 aa12.2□□□□□ -0.46
USHBP1-205ENST00000595993 NDUFA4L2Q9NRX3 87 aa12.2□□□□□ -0.46
USHBP1-205ENST00000595993 PRR13Q9NZ81 148 aa12.2□□□□□ -0.46
USHBP1-205ENST00000595993 OR51B2Q9Y5P1 312 aa12.2□□□□□ -0.46
USHBP1-205ENST00000595993 LINC00854A0A1B0GVQ3 168 aa12.19□□□□□ -0.46
USHBP1-205ENST00000595993 B3GALNT1O75752 331 aa12.19□□□□□ -0.46
USHBP1-205ENST00000595993 OR2J3O76001 311 aa12.19□□□□□ -0.46
USHBP1-205ENST00000595993 CDS2O95674 445 aa12.19□□□□□ -0.46
USHBP1-205ENST00000595993 TRBV12-3P01733 135 aa12.19□□□□□ -0.46
USHBP1-205ENST00000595993 TRAPPC2P0DI81 140 aa12.19□□□□□ -0.46
USHBP1-205ENST00000595993 TRAPPC2BP0DI82 140 aa12.19□□□□□ -0.46
USHBP1-205ENST00000595993 LYL1P12980 280 aa12.19□□□□□ -0.46
USHBP1-205ENST00000595993 SLURP1P55000 103 aa12.19□□□□□ -0.46
USHBP1-205ENST00000595993 SUPT4H1P63272 117 aaKnown RBP12.19□□□□□ -0.46
USHBP1-205ENST00000595993 DLX4Q92988 240 aaPredicted RBP12.19□□□□□ -0.46
USHBP1-205ENST00000595993 TSC22D3Q99576 134 aa12.19□□□□□ -0.46
USHBP1-205ENST00000595993 SRSF8Q9BRL6 282 aaKnown RBP12.19□□□□□ -0.46
USHBP1-205ENST00000595993 HINT2Q9BX68 163 aa12.19□□□□□ -0.46
USHBP1-205ENST00000595993 PRNDQ9UKY0 176 aa12.19□□□□□ -0.46
USHBP1-205ENST00000595993 DMRT1Q9Y5R6 373 aa12.19□□□□□ -0.46
USHBP1-205ENST00000595993 A0A0G2JLM5 398 aa12.18□□□□□ -0.46
USHBP1-205ENST00000595993 ANKRD34BA5PLL1 514 aa12.18□□□□□ -0.46
USHBP1-205ENST00000595993 FAM223BA6NKX1 122 aa12.18□□□□□ -0.46
USHBP1-205ENST00000595993 LINC01619G3V211 115 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms