RNA–Protein interactions for RNA: ENST00000594759.5

LIG1-207, Transcript of DNA ligase 1, humanhuman

TSL 1 (best)

Gene LIG1, Length 4,102 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-207ENST00000594759 DEFB108AA8MXU0 73 aa10.38□□□□□ -0.75
LIG1-207ENST00000594759 FGF12P61328 243 aa10.38□□□□□ -0.75
LIG1-207ENST00000594759 GNG3P63215 75 aa10.38□□□□□ -0.75
LIG1-207ENST00000594759 UBALD2Q8IYN6 164 aa10.38□□□□□ -0.75
LIG1-207ENST00000594759 STPG3Q8N7X2 389 aa10.38□□□□□ -0.75
LIG1-207ENST00000594759 ZNF114Q8NC26 417 aa10.38□□□□□ -0.75
LIG1-207ENST00000594759 ZNF721Q8TF20 911 aa10.38□□□□□ -0.75
LIG1-207ENST00000594759 RCHY1Q96PM5 261 aa10.38□□□□□ -0.75
LIG1-207ENST00000594759 DEPPQ9NTK1 212 aa10.38□□□□□ -0.75
LIG1-207ENST00000594759 ZFHX2Q9C0A1 2572 aaPredicted RBP10.37□□□□□ -0.75
LIG1-207ENST00000594759 A0A096LPE4 126 aa10.37□□□□□ -0.75
LIG1-207ENST00000594759 A0A1W2PPZ6 126 aa10.37□□□□□ -0.75
LIG1-207ENST00000594759 NBEAP1P0C6P0 100 aa10.37□□□□□ -0.75
LIG1-207ENST00000594759 KIR3DS1Q14943 382 aa10.37□□□□□ -0.75
LIG1-207ENST00000594759 GAGE12HA6NDE8 117 aa10.37□□□□□ -0.75
LIG1-207ENST00000594759 TAX1BP3O14907 124 aa10.37□□□□□ -0.75
LIG1-207ENST00000594759 IGKV1D-33P01593 117 aa10.37□□□□□ -0.75
LIG1-207ENST00000594759 IGKV1-33P01594 117 aa10.37□□□□□ -0.75
LIG1-207ENST00000594759 CCL1P22362 96 aa10.37□□□□□ -0.75
LIG1-207ENST00000594759 COL8A1P27658 744 aa10.37□□□□□ -0.75
LIG1-207ENST00000594759 BRCA2P51587 3418 aa10.37□□□□□ -0.75
LIG1-207ENST00000594759 LAMA2P24043 3122 aaKnown RBP10.37□□□□□ -0.75
LIG1-207ENST00000594759 TRAV8-6A0A0B4J262 113 aa10.37□□□□□ -0.75
LIG1-207ENST00000594759 A0A0G2JRQ6 117 aa10.37□□□□□ -0.75
LIG1-207ENST00000594759 NPIPB13A6NJU9 1138 aa10.37□□□□□ -0.75
LIG1-207ENST00000594759 NPIPB4C9JG80 1138 aa10.37□□□□□ -0.75
LIG1-207ENST00000594759 SYS1-DBNDD2H3BUS1 97 aa10.37□□□□□ -0.75
LIG1-207ENST00000594759 PGLYRP4Q96LB8 373 aa10.37□□□□□ -0.75
LIG1-207ENST00000594759 DECR2Q9NUI1 292 aa10.37□□□□□ -0.75
LIG1-207ENST00000594759 LOC389332A0A1B0GUA5 103 aa10.36□□□□□ -0.75
LIG1-207ENST00000594759 SSTR5P35346 364 aa10.36□□□□□ -0.75
LIG1-207ENST00000594759 CD300EQ496F6 205 aaPredicted RBP10.36□□□□□ -0.75
LIG1-207ENST00000594759 FNDC7Q5VTL7 733 aa10.36□□□□□ -0.75
LIG1-207ENST00000594759 RHBDD2Q6NTF9 364 aa10.36□□□□□ -0.75
LIG1-207ENST00000594759 WFDC12Q8WWY7 111 aa10.36□□□□□ -0.75
LIG1-207ENST00000594759 MCRIP2Q9BUT9 160 aaKnown RBP10.36□□□□□ -0.75
LIG1-207ENST00000594759 C5orf63A6NC05 138 aa10.36□□□□□ -0.75
LIG1-207ENST00000594759 H3BVH4 76 aa10.36□□□□□ -0.75
LIG1-207ENST00000594759 RRHO14718 337 aa10.36□□□□□ -0.75
LIG1-207ENST00000594759 CDIPTO14735 213 aa10.36□□□□□ -0.75
LIG1-207ENST00000594759 CCL4P13236 92 aa10.36□□□□□ -0.75
LIG1-207ENST00000594759 HBBP68871 147 aa10.36□□□□□ -0.75
LIG1-207ENST00000594759 STXBP6Q8NFX7 210 aa10.36□□□□□ -0.75
LIG1-207ENST00000594759 DNASE2BQ8WZ79 361 aa10.36□□□□□ -0.75
LIG1-207ENST00000594759 DPF1Q92782 380 aa10.36□□□□□ -0.75
LIG1-207ENST00000594759 ZNF488Q96MN9 340 aa10.36□□□□□ -0.75
LIG1-207ENST00000594759 RTL8AQ9BWD3 113 aa10.36□□□□□ -0.75
LIG1-207ENST00000594759 SSUH2Q9Y2M2 353 aa10.36□□□□□ -0.75
LIG1-207ENST00000594759 TRAV26-1A0A087WT03 109 aa10.36□□□□□ -0.75
LIG1-207ENST00000594759 FAM90A10PA6NDY2 464 aa10.36□□□□□ -0.75
LIG1-207ENST00000594759 FAM90A18PA6NE21 464 aa10.36□□□□□ -0.75
LIG1-207ENST00000594759 FAM90A16PA6NEW6 464 aa10.36□□□□□ -0.75
LIG1-207ENST00000594759 FAM90A20PA6NIJ5 464 aa10.36□□□□□ -0.75
LIG1-207ENST00000594759 FAM90A8PA6NJQ4 464 aa10.36□□□□□ -0.75
LIG1-207ENST00000594759 FAM90A7PA6NKC0 464 aa10.36□□□□□ -0.75
LIG1-207ENST00000594759 FAM90A22PA8MWA6 464 aa10.36□□□□□ -0.75
LIG1-207ENST00000594759 FAM90A12PA8MX19 464 aa10.36□□□□□ -0.75
LIG1-207ENST00000594759 FAM90A5PA8MXJ8 464 aa10.36□□□□□ -0.75
LIG1-207ENST00000594759 FAM90A23PA8MXZ1 464 aa10.36□□□□□ -0.75
LIG1-207ENST00000594759 FAM90A15PP0C7V4 464 aa10.36□□□□□ -0.75
LIG1-207ENST00000594759 FAM90A13PP0C7W8 464 aa10.36□□□□□ -0.75
LIG1-207ENST00000594759 FAM90A14PP0C7W9 464 aa10.36□□□□□ -0.75
LIG1-207ENST00000594759 FAM90A24PP0C7X0 464 aa10.36□□□□□ -0.75
LIG1-207ENST00000594759 CT45A10P0DMU9 189 aa10.36□□□□□ -0.75
LIG1-207ENST00000594759 TMEM116Q8NCL8 245 aa10.36□□□□□ -0.75
LIG1-207ENST00000594759 LYZL4Q96KX0 146 aa10.36□□□□□ -0.75
LIG1-207ENST00000594759 TMEM140Q9NV12 185 aa10.36□□□□□ -0.75
LIG1-207ENST00000594759 PILRBQ9UKJ0 227 aa10.36□□□□□ -0.75
LIG1-207ENST00000594759 KBTBD11-OT1A0A1B0GTJ5 212 aa10.35□□□□□ -0.75
LIG1-207ENST00000594759 TMEM238LA0A1B0GVL6 79 aa10.35□□□□□ -0.75
LIG1-207ENST00000594759 A0A1W2PRE2 83 aa10.35□□□□□ -0.75
LIG1-207ENST00000594759 TMEM30CPA0ZSE6 113 aa10.35□□□□□ -0.75
LIG1-207ENST00000594759 C9orf118A6NHY6 69 aa10.35□□□□□ -0.75
LIG1-207ENST00000594759 TNFSF11O14788 317 aa10.35□□□□□ -0.75
LIG1-207ENST00000594759 ZNHIT1O43257 154 aa10.35□□□□□ -0.75
LIG1-207ENST00000594759 CYC1P08574 325 aa10.35□□□□□ -0.75
LIG1-207ENST00000594759 ADAMTSL5Q6ZMM2 481 aa10.35□□□□□ -0.75
LIG1-207ENST00000594759 Q6ZRM9 215 aa10.35□□□□□ -0.75
LIG1-207ENST00000594759 ZBTB34Q8NCN2 500 aa10.35□□□□□ -0.75
LIG1-207ENST00000594759 MRAP2Q96G30 205 aa10.35□□□□□ -0.75
LIG1-207ENST00000594759 CYSLTR1Q9Y271 337 aa10.35□□□□□ -0.75
LIG1-207ENST00000594759 RNF115Q9Y4L5 304 aa10.35□□□□□ -0.75
LIG1-207ENST00000594759 R4GN57 208 aa10.35□□□□□ -0.75
LIG1-207ENST00000594759 ZNF407Q9C0G0 2248 aa10.35□□□□□ -0.75
LIG1-207ENST00000594759 IGHV3-43A0A0B4J1X8 118 aa10.35□□□□□ -0.75
LIG1-207ENST00000594759 IGHV3-43DP0DP04 118 aa10.35□□□□□ -0.75
LIG1-207ENST00000594759 SCGB1A1P11684 91 aa10.35□□□□□ -0.75
LIG1-207ENST00000594759 CCL2P13500 99 aa10.35□□□□□ -0.75
LIG1-207ENST00000594759 ARG2P78540 354 aa10.35□□□□□ -0.75
LIG1-207ENST00000594759 TBR1Q16650 682 aa10.35□□□□□ -0.75
LIG1-207ENST00000594759 C18orf32Q8TCD1 76 aa10.35□□□□□ -0.75
LIG1-207ENST00000594759 OCIAD1Q9NX40 245 aa10.35□□□□□ -0.75
LIG1-207ENST00000594759 LOC107984156A0A0G2JMH3 177 aa10.35□□□□□ -0.75
LIG1-207ENST00000594759 IGFBP7Q16270 282 aa10.35□□□□□ -0.75
LIG1-207ENST00000594759 PSG3Q16557 428 aa10.35□□□□□ -0.75
LIG1-207ENST00000594759 LYRM7Q5U5X0 104 aa10.35□□□□□ -0.75
LIG1-207ENST00000594759 ARL17AQ8IVW1 177 aa10.35□□□□□ -0.75
LIG1-207ENST00000594759 DRAM1Q8N682 238 aa10.35□□□□□ -0.75
LIG1-207ENST00000594759 SPTBN1Q01082 2364 aaKnown RBP10.35□□□□□ -0.75
LIG1-207ENST00000594759 CUL9Q8IWT3 2517 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms