RNA–Protein interactions for RNA: ENST00000594693.5

ZNF548-204, Transcript of zinc finger protein 548, humanhuman

TSL 4

Gene ZNF548, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-204ENST00000594693 DUS4LO95620 317 aaKnown RBP13.78□□□□□ -0.2
ZNF548-204ENST00000594693 HLA-AP01891 365 aaKnown RBP13.78□□□□□ -0.2
ZNF548-204ENST00000594693 TRAPPC2P0DI81 140 aa13.78□□□□□ -0.2
ZNF548-204ENST00000594693 TRAPPC2BP0DI82 140 aa13.78□□□□□ -0.2
ZNF548-204ENST00000594693 APELAP0DMC3 54 aa13.78□□□□□ -0.2
ZNF548-204ENST00000594693 RAB9AP51151 201 aa13.78□□□□□ -0.2
ZNF548-204ENST00000594693 HSPE1P61604 102 aaKnown RBP13.78□□□□□ -0.2
ZNF548-204ENST00000594693 AARDQ4LEZ3 155 aa13.78□□□□□ -0.2
ZNF548-204ENST00000594693 C4orf46Q504U0 113 aa13.78□□□□□ -0.2
ZNF548-204ENST00000594693 FAM110DQ8TAY7 271 aaPredicted RBP13.78□□□□□ -0.2
ZNF548-204ENST00000594693 MYOZ3Q8TDC0 251 aa13.78□□□□□ -0.2
ZNF548-204ENST00000594693 QTRT1Q9BXR0 403 aaKnown RBP13.78□□□□□ -0.2
ZNF548-204ENST00000594693 ZFP57Q9NU63 452 aa13.78□□□□□ -0.2
ZNF548-204ENST00000594693 ADARB2-AS1A8MUL3 147 aa13.77□□□□□ -0.21
ZNF548-204ENST00000594693 RPLP1P05386 114 aaKnown RBP13.77□□□□□ -0.21
ZNF548-204ENST00000594693 CRYGCP07315 174 aa13.77□□□□□ -0.21
ZNF548-204ENST00000594693 RAB25P57735 213 aa13.77□□□□□ -0.21
ZNF548-204ENST00000594693 NMSQ5H8A3 153 aa13.77□□□□□ -0.21
ZNF548-204ENST00000594693 CXorf66Q5JRM2 361 aaPredicted RBP13.77□□□□□ -0.21
ZNF548-204ENST00000594693 THOC7Q6I9Y2 204 aaKnown RBP13.77□□□□□ -0.21
ZNF548-204ENST00000594693 LCNL1Q6ZST4 164 aa13.77□□□□□ -0.21
ZNF548-204ENST00000594693 NDUFA11Q86Y39 141 aa13.77□□□□□ -0.21
ZNF548-204ENST00000594693 RNASE11Q8TAA1 199 aaKnown RBP13.77□□□□□ -0.21
ZNF548-204ENST00000594693 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.77□□□□□ -0.21
ZNF548-204ENST00000594693 TSSC4Q9Y5U2 329 aaPredicted RBP13.77□□□□□ -0.21
ZNF548-204ENST00000594693 IGLC7A0M8Q6 106 aa13.76□□□□□ -0.21
ZNF548-204ENST00000594693 NPIPB5A8MRT5 1133 aa13.76□□□□□ -0.21
ZNF548-204ENST00000594693 H3BUA1 57 aa13.76□□□□□ -0.21
ZNF548-204ENST00000594693 PF4V1P10720 104 aa13.76□□□□□ -0.21
ZNF548-204ENST00000594693 AREGP15514 252 aa13.76□□□□□ -0.21
ZNF548-204ENST00000594693 TMEM65Q6PI78 240 aa13.76□□□□□ -0.21
ZNF548-204ENST00000594693 HSD17B13Q7Z5P4 300 aaPredicted RBP13.76□□□□□ -0.21
ZNF548-204ENST00000594693 OR10W1Q8NGF6 305 aa13.76□□□□□ -0.21
ZNF548-204ENST00000594693 MITD1Q8WV92 249 aa13.76□□□□□ -0.21
ZNF548-204ENST00000594693 MARVELD1Q9BSK0 173 aa13.76□□□□□ -0.21
ZNF548-204ENST00000594693 ST8SIA3O43173 380 aa13.75□□□□□ -0.21
ZNF548-204ENST00000594693 RBMXL2O75526 392 aaKnown RBP13.75□□□□□ -0.21
ZNF548-204ENST00000594693 IL5P05113 134 aa13.75□□□□□ -0.21
ZNF548-204ENST00000594693 CTRB1P17538 263 aa13.75□□□□□ -0.21
ZNF548-204ENST00000594693 PSMB6P28072 239 aa13.75□□□□□ -0.21
ZNF548-204ENST00000594693 CDX1P47902 265 aaPredicted RBP13.75□□□□□ -0.21
ZNF548-204ENST00000594693 RPL23AP62750 156 aaKnown RBP13.75□□□□□ -0.21
ZNF548-204ENST00000594693 KLK9Q2XQG4 91 aa13.75□□□□□ -0.21
ZNF548-204ENST00000594693 CTRB2Q6GPI1 263 aa13.75□□□□□ -0.21
ZNF548-204ENST00000594693 PLET1Q6UQ28 207 aa13.75□□□□□ -0.21
ZNF548-204ENST00000594693 OR52B4Q8NGK2 314 aa13.75□□□□□ -0.21
ZNF548-204ENST00000594693 COQ8AQ8NI60 647 aa13.75□□□□□ -0.21
ZNF548-204ENST00000594693 SLA2Q9H6Q3 261 aa13.75□□□□□ -0.21
ZNF548-204ENST00000594693 COA4Q9NYJ1 87 aa13.75□□□□□ -0.21
ZNF548-204ENST00000594693 CACNG5Q9UF02 275 aa13.75□□□□□ -0.21
ZNF548-204ENST00000594693 KLK9Q9UKQ9 250 aa13.75□□□□□ -0.21
ZNF548-204ENST00000594693 TMED3Q9Y3Q3 217 aa13.75□□□□□ -0.21
ZNF548-204ENST00000594693 A0A1B0GU03 582 aa13.74□□□□□ -0.21
ZNF548-204ENST00000594693 SULT1A3P0DMM9 295 aa13.74□□□□□ -0.21
ZNF548-204ENST00000594693 SULT1A4P0DMN0 295 aa13.74□□□□□ -0.21
ZNF548-204ENST00000594693 PRCDQ00LT1 54 aa13.74□□□□□ -0.21
ZNF548-204ENST00000594693 WT1-ASQ06250 92 aa13.74□□□□□ -0.21
ZNF548-204ENST00000594693 PDLIM3Q53GG5 364 aaPredicted RBP13.74□□□□□ -0.21
ZNF548-204ENST00000594693 ZNF491Q8N8L2 437 aa13.74□□□□□ -0.21
ZNF548-204ENST00000594693 OR52E5Q8NH55 327 aa13.74□□□□□ -0.21
ZNF548-204ENST00000594693 ZNF431Q8TF32 576 aaPredicted RBP13.74□□□□□ -0.21
ZNF548-204ENST00000594693 UBE2E2Q96LR5 201 aa13.74□□□□□ -0.21
ZNF548-204ENST00000594693 MS4A10Q96PG2 267 aa13.74□□□□□ -0.21
ZNF548-204ENST00000594693 HINT2Q9BX68 163 aa13.74□□□□□ -0.21
ZNF548-204ENST00000594693 TRBV9A0A0B4J1U6 114 aa13.73□□□□□ -0.21
ZNF548-204ENST00000594693 INMT-MINDY4F8WBC2 141 aa13.73□□□□□ -0.21
ZNF548-204ENST00000594693 INS-IGF2F8WCM5 200 aa13.73□□□□□ -0.21
ZNF548-204ENST00000594693 PITX3O75364 302 aa13.73□□□□□ -0.21
ZNF548-204ENST00000594693 OR13C7P0DN81 318 aa13.73□□□□□ -0.21
ZNF548-204ENST00000594693 SLC25A6P12236 298 aa13.73□□□□□ -0.21
ZNF548-204ENST00000594693 SPNP16150 400 aa13.73□□□□□ -0.21
ZNF548-204ENST00000594693 DCTN2Q13561 401 aaKnown RBP13.73□□□□□ -0.21
ZNF548-204ENST00000594693 SMCO1Q147U7 214 aa13.73□□□□□ -0.21
ZNF548-204ENST00000594693 NSUN5P1Q3KNT7 163 aa13.73□□□□□ -0.21
ZNF548-204ENST00000594693 SEC22CQ9BRL7 303 aa13.73□□□□□ -0.21
ZNF548-204ENST00000594693 ZNF355PQ9NSJ1 428 aa13.73□□□□□ -0.21
ZNF548-204ENST00000594693 CACFD1Q9UGQ2 172 aa13.73□□□□□ -0.21
ZNF548-204ENST00000594693 PTTG1O95997 202 aa13.72□□□□□ -0.21
ZNF548-204ENST00000594693 IFNA17P01571 189 aa13.72□□□□□ -0.21
ZNF548-204ENST00000594693 PRH1P02810 166 aa13.72□□□□□ -0.21
ZNF548-204ENST00000594693 TRGV3P03979 118 aa13.72□□□□□ -0.21
ZNF548-204ENST00000594693 REG1AP05451 166 aa13.72□□□□□ -0.21
ZNF548-204ENST00000594693 HOXB5P09067 269 aa13.72□□□□□ -0.21
ZNF548-204ENST00000594693 SPCS3P61009 180 aa13.72□□□□□ -0.21
ZNF548-204ENST00000594693 GGNBP1Q5YKI7 109 aa13.72□□□□□ -0.21
ZNF548-204ENST00000594693 C18orf65Q6ZTR6 163 aa13.72□□□□□ -0.21
ZNF548-204ENST00000594693 FANCD2OSQ96PS1 177 aa13.72□□□□□ -0.21
ZNF548-204ENST00000594693 A0A1W2PRX2 142 aa13.71□□□□□ -0.21
ZNF548-204ENST00000594693 ADAP1O75689 374 aa13.71□□□□□ -0.21
ZNF548-204ENST00000594693 TPPP2P59282 170 aa13.71□□□□□ -0.21
ZNF548-204ENST00000594693 KHDC1LQ5JSQ8 128 aa13.71□□□□□ -0.21
ZNF548-204ENST00000594693 C19orf35Q6ZS72 473 aa13.71□□□□□ -0.21
ZNF548-204ENST00000594693 OR2C3Q8N628 320 aa13.71□□□□□ -0.21
ZNF548-204ENST00000594693 PDCD10Q9BUL8 212 aa13.71□□□□□ -0.21
ZNF548-204ENST00000594693 M0QZ24 198 aa13.7□□□□□ -0.22
ZNF548-204ENST00000594693 PRAF2O60831 178 aa13.7□□□□□ -0.22
ZNF548-204ENST00000594693 DHFRP00374 187 aa13.7□□□□□ -0.22
ZNF548-204ENST00000594693 C2orf68Q2NKX9 166 aa13.7□□□□□ -0.22
ZNF548-204ENST00000594693 MRPL41Q8IXM3 137 aaKnown RBP13.7□□□□□ -0.22
ZNF548-204ENST00000594693 C12orf45Q8N5I9 185 aaPredicted RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms