RNA–Protein interactions for RNA: ENST00000594504.5

UPF1-203, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-203ENST00000594504 TRIQKQ629K1 86 aa9.57□□□□□ -0.88
UPF1-203ENST00000594504 ZNF57Q68EA5 555 aaPredicted RBP9.57□□□□□ -0.88
UPF1-203ENST00000594504 OR5T1Q8NG75 326 aa9.57□□□□□ -0.88
UPF1-203ENST00000594504 OR4C12Q96R67 309 aa9.57□□□□□ -0.88
UPF1-203ENST00000594504 TP53RKQ96S44 253 aa9.57□□□□□ -0.88
UPF1-203ENST00000594504 TSC22D3Q99576 134 aa9.57□□□□□ -0.88
UPF1-203ENST00000594504 RTBDNQ9BSG5 229 aaPredicted RBP9.57□□□□□ -0.88
UPF1-203ENST00000594504 C5orf66Q9H5L9 145 aa9.57□□□□□ -0.88
UPF1-203ENST00000594504 ZNF355PQ9NSJ1 428 aa9.57□□□□□ -0.88
UPF1-203ENST00000594504 SORL1Q92673 2214 aa9.56□□□□□ -0.88
UPF1-203ENST00000594504 TRAV3A0A0B4J244 114 aa9.56□□□□□ -0.88
UPF1-203ENST00000594504 TEX13DA0A0J9YY54 714 aaPredicted RBP9.56□□□□□ -0.88
UPF1-203ENST00000594504 TEX22C9J3V5 150 aa9.56□□□□□ -0.88
UPF1-203ENST00000594504 ATG12O94817 140 aa9.56□□□□□ -0.88
UPF1-203ENST00000594504 IGKV1-39P01597 117 aa9.56□□□□□ -0.88
UPF1-203ENST00000594504 TRGV3P03979 118 aa9.56□□□□□ -0.88
UPF1-203ENST00000594504 IGKV1D-39P04432 117 aa9.56□□□□□ -0.88
UPF1-203ENST00000594504 OR9G9P0C7N8 305 aa9.56□□□□□ -0.88
UPF1-203ENST00000594504 APELAP0DMC3 54 aa9.56□□□□□ -0.88
UPF1-203ENST00000594504 DEFA5Q01523 94 aa9.56□□□□□ -0.88
UPF1-203ENST00000594504 BAK1Q16611 211 aa9.56□□□□□ -0.88
UPF1-203ENST00000594504 SLC25A42Q86VD7 318 aa9.56□□□□□ -0.88
UPF1-203ENST00000594504 Q8N1Y9 231 aa9.56□□□□□ -0.88
UPF1-203ENST00000594504 TTC9CQ8N5M4 171 aa9.56□□□□□ -0.88
UPF1-203ENST00000594504 ADAD2Q8NCV1 583 aaKnown RBP9.56□□□□□ -0.88
UPF1-203ENST00000594504 SEC22AQ96IW7 307 aa9.56□□□□□ -0.88
UPF1-203ENST00000594504 FYTTD1Q96QD9 318 aaKnown RBP9.56□□□□□ -0.88
UPF1-203ENST00000594504 SDHCQ99643 169 aaPredicted RBP9.56□□□□□ -0.88
UPF1-203ENST00000594504 COMMD5Q9GZQ3 224 aa9.56□□□□□ -0.88
UPF1-203ENST00000594504 COA4Q9NYJ1 87 aa9.56□□□□□ -0.88
UPF1-203ENST00000594504 A0A1B0GW64 132 aa9.55□□□□□ -0.88
UPF1-203ENST00000594504 ANKRD34BA5PLL1 514 aa9.55□□□□□ -0.88
UPF1-203ENST00000594504 HMX3A6NHT5 357 aa9.55□□□□□ -0.88
UPF1-203ENST00000594504 E7EUB6 86 aa9.55□□□□□ -0.88
UPF1-203ENST00000594504 SNAPC5O75971 98 aa9.55□□□□□ -0.88
UPF1-203ENST00000594504 UCP1P25874 307 aa9.55□□□□□ -0.88
UPF1-203ENST00000594504 OR2B8PP59922 312 aa9.55□□□□□ -0.88
UPF1-203ENST00000594504 TRIM16LQ309B1 348 aa9.55□□□□□ -0.88
UPF1-203ENST00000594504 ZFAND6Q6FIF0 208 aa9.55□□□□□ -0.88
UPF1-203ENST00000594504 THOC7Q6I9Y2 204 aaKnown RBP9.55□□□□□ -0.88
UPF1-203ENST00000594504 H2BFWTQ7Z2G1 175 aa9.55□□□□□ -0.88
UPF1-203ENST00000594504 SLC25A21Q9BQT8 299 aaPredicted RBP9.55□□□□□ -0.88
UPF1-203ENST00000594504 SRSF8Q9BRL6 282 aaKnown RBP9.55□□□□□ -0.88
UPF1-203ENST00000594504 NAA60Q9H7X0 242 aa9.55□□□□□ -0.88
UPF1-203ENST00000594504 ZMAT4Q9H898 229 aa9.55□□□□□ -0.88
UPF1-203ENST00000594504 AKIP1Q9NQ31 210 aa9.55□□□□□ -0.88
UPF1-203ENST00000594504 FKBP11Q9NYL4 201 aa9.55□□□□□ -0.88
UPF1-203ENST00000594504 PTTG2Q9NZH5 202 aa9.55□□□□□ -0.88
UPF1-203ENST00000594504 PRNDQ9UKY0 176 aa9.55□□□□□ -0.88
UPF1-203ENST00000594504 NBEAL2Q6ZNJ1 2754 aa9.54□□□□□ -0.88
UPF1-203ENST00000594504 TNCP24821 2201 aa9.54□□□□□ -0.88
UPF1-203ENST00000594504 A0A0G2JLM5 398 aa9.54□□□□□ -0.88
UPF1-203ENST00000594504 NAP1L6A6NFF2 107 aa9.54□□□□□ -0.88
UPF1-203ENST00000594504 CRYM-AS1A6NIL9 109 aa9.54□□□□□ -0.88
UPF1-203ENST00000594504 NPIPB5A8MRT5 1133 aa9.54□□□□□ -0.88
UPF1-203ENST00000594504 OR5AC1P0C628 307 aa9.54□□□□□ -0.88
UPF1-203ENST00000594504 IGHV4-30-4P0DP06 118 aa9.54□□□□□ -0.88
UPF1-203ENST00000594504 LYL1P12980 280 aa9.54□□□□□ -0.88
UPF1-203ENST00000594504 IL7P13232 177 aa9.54□□□□□ -0.88
UPF1-203ENST00000594504 MYOD1P15172 320 aa9.54□□□□□ -0.88
UPF1-203ENST00000594504 SP6Q3SY56 376 aa9.54□□□□□ -0.88
UPF1-203ENST00000594504 SGPP2Q8IWX5 399 aa9.54□□□□□ -0.88
UPF1-203ENST00000594504 OR5B3Q8NH48 314 aa9.54□□□□□ -0.88
UPF1-203ENST00000594504 QTRT1Q9BXR0 403 aaKnown RBP9.54□□□□□ -0.88
UPF1-203ENST00000594504 TMEM222Q9H0R3 208 aa9.54□□□□□ -0.88
UPF1-203ENST00000594504 TMEM14BQ9NUH8 114 aa9.54□□□□□ -0.88
UPF1-203ENST00000594504 ZNF257Q9Y2Q1 563 aa9.54□□□□□ -0.88
UPF1-203ENST00000594504 NSG2Q9Y328 171 aa9.54□□□□□ -0.88
UPF1-203ENST00000594504 TEX50A0A1B0GTY4 177 aa9.53□□□□□ -0.88
UPF1-203ENST00000594504 C13orf42A0A1B0GVH6 325 aa9.53□□□□□ -0.88
UPF1-203ENST00000594504 CGB1A6NKQ9 187 aa9.53□□□□□ -0.88
UPF1-203ENST00000594504 C15orf61A6NNL5 157 aa9.53□□□□□ -0.88
UPF1-203ENST00000594504 CDS2O95674 445 aa9.53□□□□□ -0.88
UPF1-203ENST00000594504 DHFRP00374 187 aa9.53□□□□□ -0.88
UPF1-203ENST00000594504 IGLV1-51P01701 117 aa9.53□□□□□ -0.88
UPF1-203ENST00000594504 CRYGCP07315 174 aa9.53□□□□□ -0.88
UPF1-203ENST00000594504 TRAPPC2P0DI81 140 aa9.53□□□□□ -0.88
UPF1-203ENST00000594504 TRAPPC2BP0DI82 140 aa9.53□□□□□ -0.88
UPF1-203ENST00000594504 AREGP15514 252 aa9.53□□□□□ -0.88
UPF1-203ENST00000594504 PSMB6P28072 239 aa9.53□□□□□ -0.88
UPF1-203ENST00000594504 AKR1C2P52895 323 aa9.53□□□□□ -0.88
UPF1-203ENST00000594504 DHODHQ02127 395 aa9.53□□□□□ -0.88
UPF1-203ENST00000594504 HSD17B13Q7Z5P4 300 aaPredicted RBP9.53□□□□□ -0.88
UPF1-203ENST00000594504 OR1L8Q8NGR8 309 aa9.53□□□□□ -0.88
UPF1-203ENST00000594504 GLYATL2Q8WU03 294 aa9.53□□□□□ -0.88
UPF1-203ENST00000594504 S100ZQ8WXG8 99 aa9.53□□□□□ -0.88
UPF1-203ENST00000594504 TMEM230Q96A57 120 aa9.53□□□□□ -0.88
UPF1-203ENST00000594504 GALNT14Q96FL9 552 aa9.53□□□□□ -0.88
UPF1-203ENST00000594504 USMG5Q96IX5 58 aa9.53□□□□□ -0.88
UPF1-203ENST00000594504 C7orf50Q9BRJ6 194 aaKnown RBP9.53□□□□□ -0.88
UPF1-203ENST00000594504 ELOVL1Q9BW60 279 aa9.53□□□□□ -0.88
UPF1-203ENST00000594504 C19orf73Q9NVV2 129 aa9.53□□□□□ -0.88
UPF1-203ENST00000594504 KCNIP3Q9Y2W7 256 aa9.53□□□□□ -0.88
UPF1-203ENST00000594504 OR51B2Q9Y5P1 312 aa9.53□□□□□ -0.88
UPF1-203ENST00000594504 TRBV9A0A0B4J1U6 114 aa9.52□□□□□ -0.89
UPF1-203ENST00000594504 IGLC7A0M8Q6 106 aa9.52□□□□□ -0.89
UPF1-203ENST00000594504 FAM223BA6NKX1 122 aa9.52□□□□□ -0.89
UPF1-203ENST00000594504 CENPXA8MT69 81 aa9.52□□□□□ -0.89
UPF1-203ENST00000594504 IGKV1-5P01602 117 aa9.52□□□□□ -0.89
UPF1-203ENST00000594504 TRBV12-3P01733 135 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms