RNA–Protein interactions for RNA: ENST00000592790.1

VMP1-216, Transcript of vacuole membrane protein 1, humanhuman

Gene VMP1, Length 4,325 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-216ENST00000592790 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.97□□□□□ -1.93
VMP1-216ENST00000592790 IGHV3-43A0A0B4J1X8 118 aa2.97□□□□□ -1.93
VMP1-216ENST00000592790 KIR2DL5BA0A0G2JN68 375 aa2.97□□□□□ -1.93
VMP1-216ENST00000592790 KIR2DL5BA0A0G2JPC4 375 aa2.97□□□□□ -1.93
VMP1-216ENST00000592790 FBLL1A6NHQ2 334 aaKnown RBP2.97□□□□□ -1.93
VMP1-216ENST00000592790 LEPROTL1O95214 131 aa2.97□□□□□ -1.93
VMP1-216ENST00000592790 MT-CO3P00414 261 aa2.97□□□□□ -1.93
VMP1-216ENST00000592790 IGHV3-43DP0DP04 118 aa2.97□□□□□ -1.93
VMP1-216ENST00000592790 CDKN1BP46527 198 aa2.97□□□□□ -1.93
VMP1-216ENST00000592790 ATP5G3P48201 142 aa2.97□□□□□ -1.93
VMP1-216ENST00000592790 CFHR1Q03591 330 aa2.97□□□□□ -1.93
VMP1-216ENST00000592790 TMEM97Q5BJF2 176 aa2.97□□□□□ -1.93
VMP1-216ENST00000592790 LYRM7Q5U5X0 104 aa2.97□□□□□ -1.93
VMP1-216ENST00000592790 SPINK14Q6IE38 97 aa2.97□□□□□ -1.93
VMP1-216ENST00000592790 FAM214BQ7L5A3 538 aa2.97□□□□□ -1.93
VMP1-216ENST00000592790 RNF144BQ7Z419 303 aa2.97□□□□□ -1.93
VMP1-216ENST00000592790 PPP1R32Q7Z5V6 425 aa2.97□□□□□ -1.93
VMP1-216ENST00000592790 DMRTC2Q8IXT2 367 aaPredicted RBP2.97□□□□□ -1.93
VMP1-216ENST00000592790 KIR2DL5AQ8N109 375 aa2.97□□□□□ -1.93
VMP1-216ENST00000592790 TMEM251Q8N6I4 163 aa2.97□□□□□ -1.93
VMP1-216ENST00000592790 PRSS3P2Q8NHM4 247 aa2.97□□□□□ -1.93
VMP1-216ENST00000592790 OSR1Q8TAX0 266 aaPredicted RBP2.97□□□□□ -1.93
VMP1-216ENST00000592790 UBALD1Q8TB05 177 aa2.97□□□□□ -1.93
VMP1-216ENST00000592790 CHCHD1Q96BP2 118 aaKnown RBP2.97□□□□□ -1.93
VMP1-216ENST00000592790 VSIRQ9H7M9 311 aa2.97□□□□□ -1.93
VMP1-216ENST00000592790 ST20Q9HBF5 79 aa2.97□□□□□ -1.93
VMP1-216ENST00000592790 FOXJ2Q9P0K8 574 aa2.97□□□□□ -1.93
VMP1-216ENST00000592790 PEF1Q9UBV8 284 aaKnown RBP2.97□□□□□ -1.93
VMP1-216ENST00000592790 ZNF835Q9Y2P0 537 aa2.97□□□□□ -1.93
VMP1-216ENST00000592790 MRPS16Q9Y3D3 137 aaKnown RBP2.97□□□□□ -1.93
VMP1-216ENST00000592790 AMMECR1Q9Y4X0 333 aaPredicted RBP2.97□□□□□ -1.93
VMP1-216ENST00000592790 LAMA5O15230 3695 aa2.97□□□□□ -1.93
VMP1-216ENST00000592790 NOTCH4Q99466 2003 aa2.96□□□□□ -1.93
VMP1-216ENST00000592790 SCO2A0A1W2PP80 73 aa2.96□□□□□ -1.94
VMP1-216ENST00000592790 CBY3A6NI87 242 aa2.96□□□□□ -1.94
VMP1-216ENST00000592790 C15orf61A6NNL5 157 aa2.96□□□□□ -1.94
VMP1-216ENST00000592790 C17orf98A8MV24 154 aa2.96□□□□□ -1.94
VMP1-216ENST00000592790 DEFB108AA8MXU0 73 aa2.96□□□□□ -1.94
VMP1-216ENST00000592790 RNF223E7ERA6 249 aa2.96□□□□□ -1.94
VMP1-216ENST00000592790 NDUFB3O43676 98 aa2.96□□□□□ -1.94
VMP1-216ENST00000592790 TIAF1O95411 115 aa2.96□□□□□ -1.94
VMP1-216ENST00000592790 HLA-DRB1P01911 266 aa2.96□□□□□ -1.94
VMP1-216ENST00000592790 GNB1P62873 340 aa2.96□□□□□ -1.94
VMP1-216ENST00000592790 HBBP68871 147 aa2.96□□□□□ -1.94
VMP1-216ENST00000592790 SCGB2A2Q13296 93 aa2.96□□□□□ -1.94
VMP1-216ENST00000592790 TBR1Q16650 682 aa2.96□□□□□ -1.94
VMP1-216ENST00000592790 VWC2Q2TAL6 325 aa2.96□□□□□ -1.94
VMP1-216ENST00000592790 SPINK9Q5DT21 86 aa2.96□□□□□ -1.94
VMP1-216ENST00000592790 RTN4RL2Q86UN3 420 aa2.96□□□□□ -1.94
VMP1-216ENST00000592790 FLYWCH2Q96CP2 140 aaKnown RBP2.96□□□□□ -1.94
VMP1-216ENST00000592790 ZNF837Q96EG3 531 aaPredicted RBP2.96□□□□□ -1.94
VMP1-216ENST00000592790 ELOVL1Q9BW60 279 aa2.96□□□□□ -1.94
VMP1-216ENST00000592790 MS4A6AQ9H2W1 248 aa2.96□□□□□ -1.94
VMP1-216ENST00000592790 LIME1Q9H400 295 aa2.96□□□□□ -1.94
VMP1-216ENST00000592790 CALYQ9NYX4 217 aa2.96□□□□□ -1.94
VMP1-216ENST00000592790 CNTRLQ7Z7A1 2325 aa2.96□□□□□ -1.94
VMP1-216ENST00000592790 GRIFINA4D1Z8 144 aa2.96□□□□□ -1.94
VMP1-216ENST00000592790 ZNF883P0CG24 379 aa2.96□□□□□ -1.94
VMP1-216ENST00000592790 CCL4P13236 92 aa2.96□□□□□ -1.94
VMP1-216ENST00000592790 CD33P20138 364 aa2.96□□□□□ -1.94
VMP1-216ENST00000592790 COL8A1P27658 744 aa2.96□□□□□ -1.94
VMP1-216ENST00000592790 LHX2P50458 406 aa2.96□□□□□ -1.94
VMP1-216ENST00000592790 PRRX1P54821 245 aa2.96□□□□□ -1.94
VMP1-216ENST00000592790 TCL1AP56279 114 aa2.96□□□□□ -1.94
VMP1-216ENST00000592790 RPS20P60866 119 aaKnown RBP2.96□□□□□ -1.94
VMP1-216ENST00000592790 CX3CL1P78423 397 aa2.96□□□□□ -1.94
VMP1-216ENST00000592790 Q56UQ5 140 aa2.96□□□□□ -1.94
VMP1-216ENST00000592790 Q6P435 159 aa2.96□□□□□ -1.94
VMP1-216ENST00000592790 Q6ZT83 130 aa2.96□□□□□ -1.94
VMP1-216ENST00000592790 KLF14Q8TD94 323 aaPredicted RBP2.96□□□□□ -1.94
VMP1-216ENST00000592790 ZNF524Q96C55 264 aa2.96□□□□□ -1.94
VMP1-216ENST00000592790 FMC1Q96HJ9 113 aa2.96□□□□□ -1.94
VMP1-216ENST00000592790 YPEL4Q96NS1 127 aa2.96□□□□□ -1.94
VMP1-216ENST00000592790 DYNLRB1Q9NP97 96 aa2.96□□□□□ -1.94
VMP1-216ENST00000592790 IDI2-AS1Q9NZ38 188 aa2.96□□□□□ -1.94
VMP1-216ENST00000592790 PLA2G2EQ9NZK7 142 aa2.96□□□□□ -1.94
VMP1-216ENST00000592790 PILRBQ9UKJ0 227 aa2.96□□□□□ -1.94
VMP1-216ENST00000592790 FOXA2Q9Y261 457 aaPredicted RBP2.96□□□□□ -1.94
VMP1-216ENST00000592790 IFITM10A6NMD0 228 aa2.96□□□□□ -1.94
VMP1-216ENST00000592790 MLNRO43193 412 aa2.96□□□□□ -1.94
VMP1-216ENST00000592790 ENSAO43768 121 aaKnown RBP2.96□□□□□ -1.94
VMP1-216ENST00000592790 HYPMO75409 117 aa2.96□□□□□ -1.94
VMP1-216ENST00000592790 CELA2AP08217 269 aa2.96□□□□□ -1.94
VMP1-216ENST00000592790 DEFA4P12838 97 aa2.96□□□□□ -1.94
VMP1-216ENST00000592790 LMO1P25800 156 aa2.96□□□□□ -1.94
VMP1-216ENST00000592790 CRYBB3P26998 211 aa2.96□□□□□ -1.94
VMP1-216ENST00000592790 CAMPP49913 170 aa2.96□□□□□ -1.94
VMP1-216ENST00000592790 GFRA1P56159 465 aa2.96□□□□□ -1.94
VMP1-216ENST00000592790 LGALS4P56470 323 aa2.96□□□□□ -1.94
VMP1-216ENST00000592790 CLDN18P56856 261 aa2.96□□□□□ -1.94
VMP1-216ENST00000592790 B3GALT5-AS1P59052 145 aa2.96□□□□□ -1.94
VMP1-216ENST00000592790 TNFAIP6P98066 277 aaPredicted RBP2.96□□□□□ -1.94
VMP1-216ENST00000592790 NHLH1Q02575 133 aa2.96□□□□□ -1.94
VMP1-216ENST00000592790 IZUMO4Q1ZYL8 232 aa2.96□□□□□ -1.94
VMP1-216ENST00000592790 TEX43Q6ZNM6 134 aa2.96□□□□□ -1.94
VMP1-216ENST00000592790 SHISA5Q8N114 240 aa2.96□□□□□ -1.94
VMP1-216ENST00000592790 OCC1Q8TAD7 63 aa2.96□□□□□ -1.94
VMP1-216ENST00000592790 C11orf52Q96A22 123 aa2.96□□□□□ -1.94
VMP1-216ENST00000592790 HARBI1Q96MB7 349 aa2.96□□□□□ -1.94
VMP1-216ENST00000592790 GPHA2Q96T91 129 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms