RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 THAP7Q9BT49 309 aaPredicted RBP10.52□□□□□ -0.73
APOC1-208ENST00000592535 SLIRPQ9GZT3 109 aaKnown RBP10.52□□□□□ -0.73
APOC1-208ENST00000592535 NXF2Q9GZY0 626 aaKnown RBP10.52□□□□□ -0.73
APOC1-208ENST00000592535 C19orf73Q9NVV2 129 aa10.52□□□□□ -0.73
APOC1-208ENST00000592535 KLK11Q9UBX7 282 aa10.52□□□□□ -0.73
APOC1-208ENST00000592535 HUWE1Q7Z6Z7 4374 aaKnown RBP10.52□□□□□ -0.73
APOC1-208ENST00000592535 C2orf70A6NJV1 201 aa10.51□□□□□ -0.73
APOC1-208ENST00000592535 UCP3P55916 312 aa10.51□□□□□ -0.73
APOC1-208ENST00000592535 WT1-ASQ06250 92 aa10.51□□□□□ -0.73
APOC1-208ENST00000592535 CD300EQ496F6 205 aaPredicted RBP10.51□□□□□ -0.73
APOC1-208ENST00000592535 THOC7Q6I9Y2 204 aaKnown RBP10.51□□□□□ -0.73
APOC1-208ENST00000592535 SLC38A6Q8IZM9 456 aa10.51□□□□□ -0.73
APOC1-208ENST00000592535 OR1L8Q8NGR8 309 aa10.51□□□□□ -0.73
APOC1-208ENST00000592535 OR2K2Q8NGT1 345 aa10.51□□□□□ -0.73
APOC1-208ENST00000592535 DYNLRB2Q8TF09 96 aa10.51□□□□□ -0.73
APOC1-208ENST00000592535 RCHY1Q96PM5 261 aa10.51□□□□□ -0.73
APOC1-208ENST00000592535 HINT2Q9BX68 163 aa10.51□□□□□ -0.73
APOC1-208ENST00000592535 CCDC59Q9P031 241 aaKnown RBP10.51□□□□□ -0.73
APOC1-208ENST00000592535 TRBV7-1A0A0A6YYK4 115 aa10.5□□□□□ -0.73
APOC1-208ENST00000592535 A8MZ25 164 aa10.5□□□□□ -0.73
APOC1-208ENST00000592535 LGALS9O00182 355 aa10.5□□□□□ -0.73
APOC1-208ENST00000592535 SNAPC5O75971 98 aa10.5□□□□□ -0.73
APOC1-208ENST00000592535 OR13C7P0DN81 318 aa10.5□□□□□ -0.73
APOC1-208ENST00000592535 FOLR2P14207 255 aa10.5□□□□□ -0.73
APOC1-208ENST00000592535 S100GP29377 79 aa10.5□□□□□ -0.73
APOC1-208ENST00000592535 GTSCR1Q86UQ5 136 aa10.5□□□□□ -0.73
APOC1-208ENST00000592535 GPHB5Q86YW7 130 aa10.5□□□□□ -0.73
APOC1-208ENST00000592535 CADM3Q8N126 398 aa10.5□□□□□ -0.73
APOC1-208ENST00000592535 GDPD1Q8N9F7 314 aa10.5□□□□□ -0.73
APOC1-208ENST00000592535 ZNF502Q8TBZ5 544 aa10.5□□□□□ -0.73
APOC1-208ENST00000592535 CACNG8Q8WXS5 425 aa10.5□□□□□ -0.73
APOC1-208ENST00000592535 CXorf58Q96LI9 332 aa10.5□□□□□ -0.73
APOC1-208ENST00000592535 ABHD1Q96SE0 405 aa10.5□□□□□ -0.73
APOC1-208ENST00000592535 MIXL1Q9H2W2 232 aa10.5□□□□□ -0.73
APOC1-208ENST00000592535 ZC4H2Q9NQZ6 224 aa10.5□□□□□ -0.73
APOC1-208ENST00000592535 NDUFA4L2Q9NRX3 87 aa10.5□□□□□ -0.73
APOC1-208ENST00000592535 PTTG2Q9NZH5 202 aa10.5□□□□□ -0.73
APOC1-208ENST00000592535 MTFP1Q9UDX5 166 aa10.5□□□□□ -0.73
APOC1-208ENST00000592535 OR51B2Q9Y5P1 312 aa10.5□□□□□ -0.73
APOC1-208ENST00000592535 DBX1A6NMT0 343 aa10.49□□□□□ -0.73
APOC1-208ENST00000592535 IGKV1-39P01597 117 aa10.49□□□□□ -0.73
APOC1-208ENST00000592535 CD3DP04234 171 aa10.49□□□□□ -0.73
APOC1-208ENST00000592535 IGKV1D-39P04432 117 aa10.49□□□□□ -0.73
APOC1-208ENST00000592535 IFNA6P05013 189 aa10.49□□□□□ -0.73
APOC1-208ENST00000592535 CLEC3BP05452 202 aa10.49□□□□□ -0.73
APOC1-208ENST00000592535 SERPINE2P07093 398 aa10.49□□□□□ -0.73
APOC1-208ENST00000592535 GPR183P32249 361 aa10.49□□□□□ -0.73
APOC1-208ENST00000592535 MFAP2P55001 183 aa10.49□□□□□ -0.73
APOC1-208ENST00000592535 DEFB114Q30KQ6 69 aa10.49□□□□□ -0.73
APOC1-208ENST00000592535 RNASE10Q5GAN6 216 aaKnown RBP10.49□□□□□ -0.73
APOC1-208ENST00000592535 HSD17B13Q7Z5P4 300 aaPredicted RBP10.49□□□□□ -0.73
APOC1-208ENST00000592535 LHFPL1Q86WI0 220 aa10.49□□□□□ -0.73
APOC1-208ENST00000592535 LSM10Q969L4 123 aaKnown RBP10.49□□□□□ -0.73
APOC1-208ENST00000592535 SEC22AQ96IW7 307 aa10.49□□□□□ -0.73
APOC1-208ENST00000592535 FAM212BQ9NTI7 297 aaPredicted RBP10.49□□□□□ -0.73
APOC1-208ENST00000592535 THYN1Q9P016 225 aa10.49□□□□□ -0.73
APOC1-208ENST00000592535 PRNDQ9UKY0 176 aa10.49□□□□□ -0.73
APOC1-208ENST00000592535 SELENOKQ9Y6D0 94 aa10.49□□□□□ -0.73
APOC1-208ENST00000592535 ZNF320A2RRD8 509 aa10.48□□□□□ -0.73
APOC1-208ENST00000592535 TMEM213A2RRL7 107 aa10.48□□□□□ -0.73
APOC1-208ENST00000592535 C15orf61A6NNL5 157 aa10.48□□□□□ -0.73
APOC1-208ENST00000592535 ZNF785A8K8V0 405 aa10.48□□□□□ -0.73
APOC1-208ENST00000592535 CTDSP2O14595 271 aa10.48□□□□□ -0.73
APOC1-208ENST00000592535 RGS5O15539 181 aa10.48□□□□□ -0.73
APOC1-208ENST00000592535 TPPPO94811 219 aa10.48□□□□□ -0.73
APOC1-208ENST00000592535 PGAM2P15259 253 aa10.48□□□□□ -0.73
APOC1-208ENST00000592535 PI3P19957 117 aa10.48□□□□□ -0.73
APOC1-208ENST00000592535 CBLN1P23435 193 aa10.48□□□□□ -0.73
APOC1-208ENST00000592535 PTBP1P26599 531 aaKnown RBP eCLIP10.48□□□□□ -0.73
APOC1-208ENST00000592535 FAM106AQ4KMX7 169 aa10.48□□□□□ -0.73
APOC1-208ENST00000592535 SLC25A24Q6NUK1 477 aa10.48□□□□□ -0.73
APOC1-208ENST00000592535 LAX1Q8IWV1 398 aa10.48□□□□□ -0.73
APOC1-208ENST00000592535 ARRDC1Q8N5I2 433 aa10.48□□□□□ -0.73
APOC1-208ENST00000592535 OR4D10Q8NGI6 311 aa10.48□□□□□ -0.73
APOC1-208ENST00000592535 TSC22D3Q99576 134 aa10.48□□□□□ -0.73
APOC1-208ENST00000592535 TM2D3Q9BRN9 247 aa10.48□□□□□ -0.73
APOC1-208ENST00000592535 ZMAT4Q9H898 229 aa10.48□□□□□ -0.73
APOC1-208ENST00000592535 F11RQ9Y624 299 aaKnown RBP10.48□□□□□ -0.73
APOC1-208ENST00000592535 IGHV3-35A0A0C4DH35 117 aa10.47□□□□□ -0.73
APOC1-208ENST00000592535 A8MWP6 167 aa10.47□□□□□ -0.73
APOC1-208ENST00000592535 PPP5CP53041 499 aa10.47□□□□□ -0.73
APOC1-208ENST00000592535 CD81P60033 236 aa10.47□□□□□ -0.73
APOC1-208ENST00000592535 UNQ9165/PRO28630Q6UXU0 137 aa10.47□□□□□ -0.73
APOC1-208ENST00000592535 LINC00299Q6ZSB3 139 aa10.47□□□□□ -0.73
APOC1-208ENST00000592535 H2BFWTQ7Z2G1 175 aa10.47□□□□□ -0.73
APOC1-208ENST00000592535 OR5B3Q8NH48 314 aa10.47□□□□□ -0.73
APOC1-208ENST00000592535 VN1R17PQ8TDU5 208 aa10.47□□□□□ -0.73
APOC1-208ENST00000592535 C15orf40Q8WUR7 153 aa10.47□□□□□ -0.73
APOC1-208ENST00000592535 MRGPRFQ96AM1 343 aa10.47□□□□□ -0.73
APOC1-208ENST00000592535 TMEM14BQ9NUH8 114 aa10.47□□□□□ -0.73
APOC1-208ENST00000592535 FKBP11Q9NYL4 201 aa10.47□□□□□ -0.73
APOC1-208ENST00000592535 TECRQ9NZ01 308 aaKnown RBP10.47□□□□□ -0.73
APOC1-208ENST00000592535 STAB2Q8WWQ8 2551 aa10.46□□□□□ -0.73
APOC1-208ENST00000592535 IGHV3-21A0A0B4J1V1 117 aa10.46□□□□□ -0.73
APOC1-208ENST00000592535 CYB5BO43169 146 aa10.46□□□□□ -0.73
APOC1-208ENST00000592535 TGOLN2O43493 480 aa10.46□□□□□ -0.73
APOC1-208ENST00000592535 CD74P04233 296 aa10.46□□□□□ -0.73
APOC1-208ENST00000592535 CD7P09564 240 aa10.46□□□□□ -0.73
APOC1-208ENST00000592535 TBPP20226 339 aa10.46□□□□□ -0.73
APOC1-208ENST00000592535 PIGPP57054 158 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms