RNA–Protein interactions for RNA: ENST00000592361.2

MBD3-210, Transcript of methyl-CpG binding domain protein 3, human

TSL 5

Gene MBD3, Length 907 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MBD3-210	ENST00000592361	UXS1	Q8NBZ7	420 aa		12.83	□□□□□ -0.36
MBD3-210	ENST00000592361	CACNG8	Q8WXS5	425 aa		12.83	□□□□□ -0.36
MBD3-210	ENST00000592361	LSM10	Q969L4	123 aa	Known RBP	12.83	□□□□□ -0.36
MBD3-210	ENST00000592361	MOB3A	Q96BX8	217 aa		12.83	□□□□□ -0.36
MBD3-210	ENST00000592361	TMEM56	Q96MV1	263 aa		12.83	□□□□□ -0.36
MBD3-210	ENST00000592361	TSC22D3	Q99576	134 aa		12.83	□□□□□ -0.36
MBD3-210	ENST00000592361	ZNF2	Q9BSG1	426 aa	Predicted RBP	12.83	□□□□□ -0.36
MBD3-210	ENST00000592361	GAR1	Q9NY12	217 aa	Known RBP	12.83	□□□□□ -0.36
MBD3-210	ENST00000592361	FKBP11	Q9NYL4	201 aa		12.83	□□□□□ -0.36
MBD3-210	ENST00000592361	STARD9	Q9P2P6	4700 aa		12.82	□□□□□ -0.36
MBD3-210	ENST00000592361	FCER2	P06734	321 aa		12.82	□□□□□ -0.36
MBD3-210	ENST00000592361	LPCAT3	Q6P1A2	487 aa		12.82	□□□□□ -0.36
MBD3-210	ENST00000592361	SPSB3	Q6PJ21	355 aa		12.82	□□□□□ -0.36
MBD3-210	ENST00000592361	BTNL8	Q6UX41	500 aa		12.82	□□□□□ -0.36
MBD3-210	ENST00000592361	CADM3	Q8N126	398 aa		12.82	□□□□□ -0.36
MBD3-210	ENST00000592361	OR6F1	Q8NGZ6	308 aa		12.82	□□□□□ -0.36
MBD3-210	ENST00000592361	ZNF502	Q8TBZ5	544 aa		12.82	□□□□□ -0.36
MBD3-210	ENST00000592361	BSCL2	Q96G97	398 aa	Predicted RBP	12.82	□□□□□ -0.36
MBD3-210	ENST00000592361	GGTLC1	Q9BX51	225 aa		12.82	□□□□□ -0.36
MBD3-210	ENST00000592361	SMIM31	A0A1B0GVY4	71 aa		12.81	□□□□□ -0.36
MBD3-210	ENST00000592361	GPR31	O00270	319 aa		12.81	□□□□□ -0.36
MBD3-210	ENST00000592361	TGOLN2	O43493	480 aa		12.81	□□□□□ -0.36
MBD3-210	ENST00000592361	SERPINE2	P07093	398 aa		12.81	□□□□□ -0.36
MBD3-210	ENST00000592361	OR13C7	P0DN81	318 aa		12.81	□□□□□ -0.36
MBD3-210	ENST00000592361	GNRHR	P30968	328 aa		12.81	□□□□□ -0.36
MBD3-210	ENST00000592361	PRSS3	P35030	304 aa		12.81	□□□□□ -0.36
MBD3-210	ENST00000592361	LAMTOR1	Q6IAA8	161 aa		12.81	□□□□□ -0.36
MBD3-210	ENST00000592361	DHRS11	Q6UWP2	260 aa		12.81	□□□□□ -0.36
MBD3-210	ENST00000592361	SPAG8	Q99932	426 aa	Predicted RBP	12.81	□□□□□ -0.36
MBD3-210	ENST00000592361	FAM110A	Q9BQ89	295 aa		12.81	□□□□□ -0.36
MBD3-210	ENST00000592361	HINT2	Q9BX68	163 aa		12.81	□□□□□ -0.36
MBD3-210	ENST00000592361	RETN	Q9HD89	108 aa		12.81	□□□□□ -0.36
MBD3-210	ENST00000592361	DAZ1	Q9NQZ3	744 aa	Known RBP	12.81	□□□□□ -0.36
MBD3-210	ENST00000592361	MLX	Q9UH92	298 aa		12.81	□□□□□ -0.36
MBD3-210	ENST00000592361	PRND	Q9UKY0	176 aa		12.81	□□□□□ -0.36
MBD3-210	ENST00000592361	RYR2	Q92736	4967 aa		12.8	□□□□□ -0.36
MBD3-210	ENST00000592361	SACS	Q9NZJ4	4579 aa		12.8	□□□□□ -0.36
MBD3-210	ENST00000592361		A0A087WXM4	84 aa		12.8	□□□□□ -0.36
MBD3-210	ENST00000592361	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	12.8	□□□□□ -0.36
MBD3-210	ENST00000592361	RBMY1B	A6NDE4	496 aa	Known RBP	12.8	□□□□□ -0.36
MBD3-210	ENST00000592361	RBMY1E	A6NEQ0	496 aa	Known RBP	12.8	□□□□□ -0.36
MBD3-210	ENST00000592361	SCAF4	O95104	1147 aa	Known RBP	12.8	□□□□□ -0.36
MBD3-210	ENST00000592361	RBMY1D	P0C7P1	496 aa	Known RBP	12.8	□□□□□ -0.36
MBD3-210	ENST00000592361	TAS2R20	P59543	309 aa		12.8	□□□□□ -0.36
MBD3-210	ENST00000592361	TSPAN5	P62079	268 aa		12.8	□□□□□ -0.36
MBD3-210	ENST00000592361	ZNF585B	Q52M93	769 aa		12.8	□□□□□ -0.36
MBD3-210	ENST00000592361	SLC25A24	Q6NUK1	477 aa		12.8	□□□□□ -0.36
MBD3-210	ENST00000592361	OR5B3	Q8NH48	314 aa		12.8	□□□□□ -0.36
MBD3-210	ENST00000592361	TMEM190	Q8WZ59	177 aa		12.8	□□□□□ -0.36
MBD3-210	ENST00000592361	DGCR14	Q96DF8	476 aa	Known RBP	12.8	□□□□□ -0.36
MBD3-210	ENST00000592361	WFDC10A	Q9H1F0	79 aa		12.8	□□□□□ -0.36
MBD3-210	ENST00000592361	FAM212B	Q9NTI7	297 aa	Predicted RBP	12.8	□□□□□ -0.36
MBD3-210	ENST00000592361	TRAV3	A0A0B4J244	114 aa		12.79	□□□□□ -0.36
MBD3-210	ENST00000592361	CGB1	A6NKQ9	187 aa		12.79	□□□□□ -0.36
MBD3-210	ENST00000592361	TNFAIP8	O95379	198 aa		12.79	□□□□□ -0.36
MBD3-210	ENST00000592361	PMP2	P02689	132 aa		12.79	□□□□□ -0.36
MBD3-210	ENST00000592361	RFX2	P48378	723 aa		12.79	□□□□□ -0.36
MBD3-210	ENST00000592361	APOC4	P55056	127 aa		12.79	□□□□□ -0.36
MBD3-210	ENST00000592361	TM4SF20	Q53R12	229 aa		12.79	□□□□□ -0.36
MBD3-210	ENST00000592361	OR2C3	Q8N628	320 aa		12.79	□□□□□ -0.36
MBD3-210	ENST00000592361	ZNF436	Q9C0F3	470 aa	Predicted RBP	12.79	□□□□□ -0.36
MBD3-210	ENST00000592361	C5orf66	Q9H5L9	145 aa		12.79	□□□□□ -0.36
MBD3-210	ENST00000592361	ANAPC10	Q9UM13	185 aa		12.79	□□□□□ -0.36
MBD3-210	ENST00000592361	OR51B2	Q9Y5P1	312 aa		12.79	□□□□□ -0.36
MBD3-210	ENST00000592361	F11R	Q9Y624	299 aa	Known RBP	12.79	□□□□□ -0.36
MBD3-210	ENST00000592361	TEX50	A0A1B0GTY4	177 aa		12.78	□□□□□ -0.36
MBD3-210	ENST00000592361	NDUFA4	O00483	81 aa		12.78	□□□□□ -0.36
MBD3-210	ENST00000592361	PGLYRP1	O75594	196 aa	Predicted RBP	12.78	□□□□□ -0.36
MBD3-210	ENST00000592361	KRAS	P01116	189 aa		12.78	□□□□□ -0.36
MBD3-210	ENST00000592361	C8orf88	P0DMB2	117 aa		12.78	□□□□□ -0.36
MBD3-210	ENST00000592361	RPA2	P15927	270 aa		12.78	□□□□□ -0.36
MBD3-210	ENST00000592361	NAT1	P18440	290 aa		12.78	□□□□□ -0.36
MBD3-210	ENST00000592361	EDN2	P20800	178 aa		12.78	□□□□□ -0.36
MBD3-210	ENST00000592361	LPAR6	P43657	344 aa		12.78	□□□□□ -0.36
MBD3-210	ENST00000592361	OR10W1	Q8NGF6	305 aa		12.78	□□□□□ -0.36
MBD3-210	ENST00000592361	CMTM3	Q96MX0	182 aa		12.78	□□□□□ -0.36
MBD3-210	ENST00000592361	SCPEP1	Q9HB40	452 aa		12.78	□□□□□ -0.36
MBD3-210	ENST00000592361	C21orf62	Q9NYP8	219 aa		12.78	□□□□□ -0.36
MBD3-210	ENST00000592361	OR2T8	A6NH00	312 aa		12.77	□□□□□ -0.37
MBD3-210	ENST00000592361	OR4C46	A6NHA9	309 aa		12.77	□□□□□ -0.37
MBD3-210	ENST00000592361	HRH1	P35367	487 aa		12.77	□□□□□ -0.37
MBD3-210	ENST00000592361	RPS19	P39019	145 aa	Known RBP	12.77	□□□□□ -0.37
MBD3-210	ENST00000592361	REL	Q04864	619 aa	Predicted RBP	12.77	□□□□□ -0.37
MBD3-210	ENST00000592361	WT1-AS	Q06250	92 aa		12.77	□□□□□ -0.37
MBD3-210	ENST00000592361	UNQ9165/PRO28630	Q6UXU0	137 aa		12.77	□□□□□ -0.37
MBD3-210	ENST00000592361	FCAMR	Q8WWV6	532 aa		12.77	□□□□□ -0.37
MBD3-210	ENST00000592361	SLC25A46	Q96AG3	418 aa		12.77	□□□□□ -0.37
MBD3-210	ENST00000592361	C6orf62	Q9GZU0	229 aa	Predicted RBP	12.77	□□□□□ -0.37
MBD3-210	ENST00000592361	NDUFA4L2	Q9NRX3	87 aa		12.77	□□□□□ -0.37
MBD3-210	ENST00000592361	IGHV3-35	A0A0C4DH35	117 aa		12.76	□□□□□ -0.37
MBD3-210	ENST00000592361	TSPAN4	O14817	238 aa		12.76	□□□□□ -0.37
MBD3-210	ENST00000592361	APOA1	P02647	267 aa		12.76	□□□□□ -0.37
MBD3-210	ENST00000592361	G6PC	P35575	357 aa		12.76	□□□□□ -0.37
MBD3-210	ENST00000592361	LSM3	P62310	102 aa	Known RBP	12.76	□□□□□ -0.37
MBD3-210	ENST00000592361		Q56UQ5	140 aa		12.76	□□□□□ -0.37
MBD3-210	ENST00000592361	UBAC2	Q8NBM4	344 aa		12.76	□□□□□ -0.37
MBD3-210	ENST00000592361	C20orf24	Q9BUV8	137 aa		12.76	□□□□□ -0.37
MBD3-210	ENST00000592361	FXYD6	Q9H0Q3	95 aa		12.76	□□□□□ -0.37
MBD3-210	ENST00000592361	C15orf61	A6NNL5	157 aa		12.75	□□□□□ -0.37
MBD3-210	ENST00000592361	NUPL2	O15504	423 aa	Known RBP	12.75	□□□□□ -0.37

Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms