RNA–Protein interactions for RNA: ENST00000592060.5

MBD1-227, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-227ENST00000592060 ADORA2A-AS1P86434 159 aa12.8□□□□□ -0.36
MBD1-227ENST00000592060 DIAPH2-AS1Q14236 149 aa12.8□□□□□ -0.36
MBD1-227ENST00000592060 LINC00518Q8N0U6 118 aa12.8□□□□□ -0.36
MBD1-227ENST00000592060 OR5B3Q8NH48 314 aa12.8□□□□□ -0.36
MBD1-227ENST00000592060 TMEM186Q96B77 213 aa12.8□□□□□ -0.36
MBD1-227ENST00000592060 PATZ1Q9HBE1 687 aaKnown RBP12.8□□□□□ -0.36
MBD1-227ENST00000592060 KCNIP2Q9NS61 270 aa12.8□□□□□ -0.36
MBD1-227ENST00000592060 FKBP11Q9NYL4 201 aa12.8□□□□□ -0.36
MBD1-227ENST00000592060 REG1BP48304 166 aa12.8□□□□□ -0.36
MBD1-227ENST00000592060 RND2P52198 227 aa12.8□□□□□ -0.36
MBD1-227ENST00000592060 IQCF2Q8IXL9 164 aa12.8□□□□□ -0.36
MBD1-227ENST00000592060 C11orf42Q8N5U0 333 aa12.8□□□□□ -0.36
MBD1-227ENST00000592060 OR10X1Q8NGY0 326 aa12.8□□□□□ -0.36
MBD1-227ENST00000592060 OR4F5Q8NH21 305 aa12.8□□□□□ -0.36
MBD1-227ENST00000592060 OR4F4Q96R69 305 aa12.8□□□□□ -0.36
MBD1-227ENST00000592060 TMEM242Q9NWH2 141 aa12.8□□□□□ -0.36
MBD1-227ENST00000592060 C5orf52A6NGY3 159 aa12.79□□□□□ -0.36
MBD1-227ENST00000592060 IGHV1-8P0DP01 117 aa12.79□□□□□ -0.36
MBD1-227ENST00000592060 CDSNQ15517 529 aa12.79□□□□□ -0.36
MBD1-227ENST00000592060 C2orf83Q53S99 150 aa12.79□□□□□ -0.36
MBD1-227ENST00000592060 TEPPQ6URK8 271 aa12.79□□□□□ -0.36
MBD1-227ENST00000592060 PDPNQ86YL7 162 aa12.79□□□□□ -0.36
MBD1-227ENST00000592060 NEIL1Q96FI4 390 aaPredicted RBP12.79□□□□□ -0.36
MBD1-227ENST00000592060 PARLQ9H300 379 aa12.79□□□□□ -0.36
MBD1-227ENST00000592060 USP24Q9UPU5 2620 aa12.79□□□□□ -0.36
MBD1-227ENST00000592060 TRBV23-1A0A0A0MS06 115 aa12.78□□□□□ -0.36
MBD1-227ENST00000592060 A0A1W2PPV4 95 aa12.78□□□□□ -0.36
MBD1-227ENST00000592060 OPN1MWP04001 364 aa12.78□□□□□ -0.36
MBD1-227ENST00000592060 STAG3L2P0CL84 134 aa12.78□□□□□ -0.36
MBD1-227ENST00000592060 STAG3L3P0CL85 134 aa12.78□□□□□ -0.36
MBD1-227ENST00000592060 OPN1MW2P0DN77 364 aa12.78□□□□□ -0.36
MBD1-227ENST00000592060 OPN1MW3P0DN78 364 aa12.78□□□□□ -0.36
MBD1-227ENST00000592060 ATP5IP56385 69 aaPredicted RBP12.78□□□□□ -0.36
MBD1-227ENST00000592060 SNRPEP62304 92 aaKnown RBP12.78□□□□□ -0.36
MBD1-227ENST00000592060 ZNF672Q499Z4 452 aaPredicted RBP12.78□□□□□ -0.36
MBD1-227ENST00000592060 MUC15Q8N387 334 aa12.78□□□□□ -0.36
MBD1-227ENST00000592060 OR9G1Q8NH87 305 aa12.78□□□□□ -0.36
MBD1-227ENST00000592060 SSMEM1Q8WWF3 244 aa12.78□□□□□ -0.36
MBD1-227ENST00000592060 RPUSD4Q96CM3 377 aaKnown RBP12.78□□□□□ -0.36
MBD1-227ENST00000592060 TNCP24821 2201 aa12.78□□□□□ -0.36
MBD1-227ENST00000592060 FSTL3O95633 263 aa12.78□□□□□ -0.36
MBD1-227ENST00000592060 RNASE2P10153 161 aaKnown RBP12.78□□□□□ -0.36
MBD1-227ENST00000592060 RPL35P42766 123 aaKnown RBP12.78□□□□□ -0.36
MBD1-227ENST00000592060 RPL29P47914 159 aaKnown RBP12.78□□□□□ -0.36
MBD1-227ENST00000592060 B2MP61769 119 aa12.78□□□□□ -0.36
MBD1-227ENST00000592060 TMEM241Q24JQ0 296 aa12.78□□□□□ -0.36
MBD1-227ENST00000592060 ZNF674Q2M3X9 581 aa12.78□□□□□ -0.36
MBD1-227ENST00000592060 STPG3Q8N7X2 389 aa12.78□□□□□ -0.36
MBD1-227ENST00000592060 OR1L8Q8NGR8 309 aa12.78□□□□□ -0.36
MBD1-227ENST00000592060 TMEM167AQ8TBQ9 72 aa12.78□□□□□ -0.36
MBD1-227ENST00000592060 FLYWCH2Q96CP2 140 aaKnown RBP12.78□□□□□ -0.36
MBD1-227ENST00000592060 NDUFA4L2Q9NRX3 87 aa12.78□□□□□ -0.36
MBD1-227ENST00000592060 URGCP-MRPS24S4R325 110 aa12.78□□□□□ -0.36
MBD1-227ENST00000592060 TGIF2-C20orf24A0A0A6YYL0 155 aa12.77□□□□□ -0.37
MBD1-227ENST00000592060 C11orf94C9JXX5 98 aa12.77□□□□□ -0.37
MBD1-227ENST00000592060 INS-IGF2F8WCM5 200 aa12.77□□□□□ -0.37
MBD1-227ENST00000592060 LYNX1G3V0Z9 82 aa12.77□□□□□ -0.37
MBD1-227ENST00000592060 IGLV2-23P01705 113 aa12.77□□□□□ -0.37
MBD1-227ENST00000592060 IGHV2-70P01814 119 aa12.77□□□□□ -0.37
MBD1-227ENST00000592060 ARL14EPLP0DKL9 152 aa12.77□□□□□ -0.37
MBD1-227ENST00000592060 LYNX1P0DP58 116 aa12.77□□□□□ -0.37
MBD1-227ENST00000592060 IGFBP2P18065 325 aa12.77□□□□□ -0.37
MBD1-227ENST00000592060 NPPCP23582 126 aa12.77□□□□□ -0.37
MBD1-227ENST00000592060 COL8A2P25067 703 aa12.77□□□□□ -0.37
MBD1-227ENST00000592060 RPL23P62829 140 aaKnown RBP12.77□□□□□ -0.37
MBD1-227ENST00000592060 PRR20EP86478 221 aa12.77□□□□□ -0.37
MBD1-227ENST00000592060 PRR20CP86479 221 aa12.77□□□□□ -0.37
MBD1-227ENST00000592060 PRR20DP86480 221 aa12.77□□□□□ -0.37
MBD1-227ENST00000592060 PRR20BP86481 221 aa12.77□□□□□ -0.37
MBD1-227ENST00000592060 PRR20AP86496 221 aa12.77□□□□□ -0.37
MBD1-227ENST00000592060 OR4C13Q8NGP0 309 aa12.77□□□□□ -0.37
MBD1-227ENST00000592060 OR4A5Q8NH83 315 aa12.77□□□□□ -0.37
MBD1-227ENST00000592060 SSX3Q99909 188 aa12.77□□□□□ -0.37
MBD1-227ENST00000592060 PCGF1Q9BSM1 259 aa12.77□□□□□ -0.37
MBD1-227ENST00000592060 TMEM204Q9BSN7 226 aa12.77□□□□□ -0.37
MBD1-227ENST00000592060 CTDSP1Q9GZU7 261 aa12.77□□□□□ -0.37
MBD1-227ENST00000592060 WASHC3Q9Y3C0 194 aa12.77□□□□□ -0.37
MBD1-227ENST00000592060 CLDN34H7C241 214 aa12.76□□□□□ -0.37
MBD1-227ENST00000592060 UBE2CO00762 179 aa12.76□□□□□ -0.37
MBD1-227ENST00000592060 IGHV2-5P01817 119 aa12.76□□□□□ -0.37
MBD1-227ENST00000592060 USF1P22415 310 aaPredicted RBP12.76□□□□□ -0.37
MBD1-227ENST00000592060 AKR1D1P51857 326 aa12.76□□□□□ -0.37
MBD1-227ENST00000592060 RPL8P62917 257 aaKnown RBP12.76□□□□□ -0.37
MBD1-227ENST00000592060 ZNF841Q6ZN19 808 aa12.76□□□□□ -0.37
MBD1-227ENST00000592060 TMEM133Q9H2Q1 129 aa12.76□□□□□ -0.37
MBD1-227ENST00000592060 LINC00869P0C866 280 aa12.76□□□□□ -0.37
MBD1-227ENST00000592060 RPS10P46783 165 aaKnown RBP12.76□□□□□ -0.37
MBD1-227ENST00000592060 ATP5G3P48201 142 aa12.76□□□□□ -0.37
MBD1-227ENST00000592060 PPOXP50336 477 aa12.76□□□□□ -0.37
MBD1-227ENST00000592060 ADIRFQ15847 76 aa12.76□□□□□ -0.37
MBD1-227ENST00000592060 SPNS3Q6ZMD2 512 aa12.76□□□□□ -0.37
MBD1-227ENST00000592060 TMEM144Q7Z5S9 345 aa12.76□□□□□ -0.37
MBD1-227ENST00000592060 OR10W1Q8NGF6 305 aa12.76□□□□□ -0.37
MBD1-227ENST00000592060 ABHD5Q8WTS1 349 aa12.76□□□□□ -0.37
MBD1-227ENST00000592060 RALYQ9UKM9 306 aaKnown RBP12.76□□□□□ -0.37
MBD1-227ENST00000592060 SMG1Q96Q15 3661 aaKnown RBP12.76□□□□□ -0.37
MBD1-227ENST00000592060 CGB1A6NKQ9 187 aa12.75□□□□□ -0.37
MBD1-227ENST00000592060 CXorf1O96002 111 aa12.75□□□□□ -0.37
MBD1-227ENST00000592060 RAB31Q13636 194 aa12.75□□□□□ -0.37
MBD1-227ENST00000592060 MOB3BQ86TA1 216 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms