RNA–Protein interactions for RNA: ENST00000592017.5

CLIP3-205, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

TSL 5

Gene CLIP3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-205ENST00000592017 PRRT1Q99946 306 aa10.7□□□□□ -0.7
CLIP3-205ENST00000592017 THAP7Q9BT49 309 aaPredicted RBP10.7□□□□□ -0.7
CLIP3-205ENST00000592017 FAM212BQ9NTI7 297 aaPredicted RBP10.7□□□□□ -0.7
CLIP3-205ENST00000592017 ZMAT5Q9UDW3 170 aaKnown RBP10.7□□□□□ -0.7
CLIP3-205ENST00000592017 FBXL7Q9UJT9 491 aa10.7□□□□□ -0.7
CLIP3-205ENST00000592017 PRNDQ9UKY0 176 aa10.7□□□□□ -0.7
CLIP3-205ENST00000592017 OR51B2Q9Y5P1 312 aa10.7□□□□□ -0.7
CLIP3-205ENST00000592017 S4R3C0 116 aa10.7□□□□□ -0.7
CLIP3-205ENST00000592017 V9GYH0 126 aa10.7□□□□□ -0.7
CLIP3-205ENST00000592017 TRBV9A0A0B4J1U6 114 aa10.69□□□□□ -0.7
CLIP3-205ENST00000592017 TEX50A0A1B0GTY4 177 aa10.69□□□□□ -0.7
CLIP3-205ENST00000592017 IGLC7A0M8Q6 106 aa10.69□□□□□ -0.7
CLIP3-205ENST00000592017 CRYGCP07315 174 aa10.69□□□□□ -0.7
CLIP3-205ENST00000592017 CTSDP07339 412 aaPredicted RBP10.69□□□□□ -0.7
CLIP3-205ENST00000592017 TRAPPC2P0DI81 140 aa10.69□□□□□ -0.7
CLIP3-205ENST00000592017 TRAPPC2BP0DI82 140 aa10.69□□□□□ -0.7
CLIP3-205ENST00000592017 PTBP1P26599 531 aaKnown RBP eCLIP10.69□□□□□ -0.7
CLIP3-205ENST00000592017 MECP2P51608 486 aaKnown RBP10.69□□□□□ -0.7
CLIP3-205ENST00000592017 AKR1C2P52895 323 aa10.69□□□□□ -0.7
CLIP3-205ENST00000592017 RPEL1Q2QD12 228 aa10.69□□□□□ -0.7
CLIP3-205ENST00000592017 Q8N402 240 aa10.69□□□□□ -0.7
CLIP3-205ENST00000592017 SEC22AQ96IW7 307 aa10.69□□□□□ -0.7
CLIP3-205ENST00000592017 PRR25Q96S07 402 aa10.69□□□□□ -0.7
CLIP3-205ENST00000592017 TSC22D3Q99576 134 aa10.69□□□□□ -0.7
CLIP3-205ENST00000592017 TENM3Q9P273 2699 aa10.68□□□□□ -0.7
CLIP3-205ENST00000592017 TEX13DA0A0J9YY54 714 aaPredicted RBP10.68□□□□□ -0.7
CLIP3-205ENST00000592017 C15orf61A6NNL5 157 aa10.68□□□□□ -0.7
CLIP3-205ENST00000592017 NDUFB8O95169 186 aa10.68□□□□□ -0.7
CLIP3-205ENST00000592017 LY86O95711 162 aa10.68□□□□□ -0.7
CLIP3-205ENST00000592017 FGF2P09038 288 aa10.68□□□□□ -0.7
CLIP3-205ENST00000592017 OR13C7P0DN81 318 aa10.68□□□□□ -0.7
CLIP3-205ENST00000592017 SYNJ2BPP57105 145 aa10.68□□□□□ -0.7
CLIP3-205ENST00000592017 ZNF79Q15937 498 aa10.68□□□□□ -0.7
CLIP3-205ENST00000592017 SPANXN2Q5MJ10 180 aa10.68□□□□□ -0.7
CLIP3-205ENST00000592017 THOC7Q6I9Y2 204 aaKnown RBP10.68□□□□□ -0.7
CLIP3-205ENST00000592017 CCDC190Q86UF4 302 aa10.68□□□□□ -0.7
CLIP3-205ENST00000592017 OR4A16Q8NH70 328 aa10.68□□□□□ -0.7
CLIP3-205ENST00000592017 RNASE11Q8TAA1 199 aaKnown RBP10.68□□□□□ -0.7
CLIP3-205ENST00000592017 TRIM63Q969Q1 353 aa10.68□□□□□ -0.7
CLIP3-205ENST00000592017 FANCD2OSQ96PS1 177 aa10.68□□□□□ -0.7
CLIP3-205ENST00000592017 B9D2Q9BPU9 175 aa10.68□□□□□ -0.7
CLIP3-205ENST00000592017 SRSF8Q9BRL6 282 aaKnown RBP10.68□□□□□ -0.7
CLIP3-205ENST00000592017 SCP2D1Q9UJQ7 156 aa10.68□□□□□ -0.7
CLIP3-205ENST00000592017 LSM4Q9Y4Z0 139 aaKnown RBP10.68□□□□□ -0.7
CLIP3-205ENST00000592017 DBX1A6NMT0 343 aa10.67□□□□□ -0.7
CLIP3-205ENST00000592017 OR5AC1P0C628 307 aa10.67□□□□□ -0.7
CLIP3-205ENST00000592017 HIST1H1BP16401 226 aaKnown RBP10.67□□□□□ -0.7
CLIP3-205ENST00000592017 FAUP35544 74 aaKnown RBP10.67□□□□□ -0.7
CLIP3-205ENST00000592017 INSL3P51460 131 aa10.67□□□□□ -0.7
CLIP3-205ENST00000592017 AP3S2P59780 193 aa10.67□□□□□ -0.7
CLIP3-205ENST00000592017 SURF2Q15527 256 aaPredicted RBP10.67□□□□□ -0.7
CLIP3-205ENST00000592017 IZUMO4Q1ZYL8 232 aa10.67□□□□□ -0.7
CLIP3-205ENST00000592017 ACSM6Q6P461 480 aa10.67□□□□□ -0.7
CLIP3-205ENST00000592017 HAPLN4Q86UW8 402 aa10.67□□□□□ -0.7
CLIP3-205ENST00000592017 ZNF429Q86V71 674 aa10.67□□□□□ -0.7
CLIP3-205ENST00000592017 TOMM5Q8N4H5 51 aa10.67□□□□□ -0.7
CLIP3-205ENST00000592017 OR5B3Q8NH48 314 aa10.67□□□□□ -0.7
CLIP3-205ENST00000592017 LSM10Q969L4 123 aaKnown RBP10.67□□□□□ -0.7
CLIP3-205ENST00000592017 EEF1AKMT3Q96AZ1 226 aa10.67□□□□□ -0.7
CLIP3-205ENST00000592017 OR4C12Q96R67 309 aa10.67□□□□□ -0.7
CLIP3-205ENST00000592017 RTBDNQ9BSG5 229 aaPredicted RBP10.67□□□□□ -0.7
CLIP3-205ENST00000592017 C5orf66Q9H5L9 145 aa10.67□□□□□ -0.7
CLIP3-205ENST00000592017 NAA60Q9H7X0 242 aa10.67□□□□□ -0.7
CLIP3-205ENST00000592017 NDUFA4L2Q9NRX3 87 aa10.67□□□□□ -0.7
CLIP3-205ENST00000592017 TMEM14BQ9NUH8 114 aa10.67□□□□□ -0.7
CLIP3-205ENST00000592017 SLC2A8Q9NY64 477 aa10.67□□□□□ -0.7
CLIP3-205ENST00000592017 FKBP11Q9NYL4 201 aa10.67□□□□□ -0.7
CLIP3-205ENST00000592017 IGLV11-55A0A075B6I3 123 aa10.66□□□□□ -0.7
CLIP3-205ENST00000592017 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.66□□□□□ -0.7
CLIP3-205ENST00000592017 PPP5D1E7EU14 171 aa10.66□□□□□ -0.7
CLIP3-205ENST00000592017 BMPR1BO00238 502 aa10.66□□□□□ -0.7
CLIP3-205ENST00000592017 ATG12O94817 140 aa10.66□□□□□ -0.7
CLIP3-205ENST00000592017 IGKV1-5P01602 117 aa10.66□□□□□ -0.7
CLIP3-205ENST00000592017 WT1-ASQ06250 92 aa10.66□□□□□ -0.7
CLIP3-205ENST00000592017 CD69Q07108 199 aa10.66□□□□□ -0.7
CLIP3-205ENST00000592017 KLF9Q13886 244 aaPredicted RBP10.66□□□□□ -0.7
CLIP3-205ENST00000592017 HSD17B13Q7Z5P4 300 aaPredicted RBP10.66□□□□□ -0.7
CLIP3-205ENST00000592017 CADM3Q8N126 398 aa10.66□□□□□ -0.7
CLIP3-205ENST00000592017 GDPD1Q8N9F7 314 aa10.66□□□□□ -0.7
CLIP3-205ENST00000592017 TMEM56Q96MV1 263 aa10.66□□□□□ -0.7
CLIP3-205ENST00000592017 ELOVL1Q9BW60 279 aa10.66□□□□□ -0.7
CLIP3-205ENST00000592017 NDUFA13Q9P0J0 144 aa10.66□□□□□ -0.7
CLIP3-205ENST00000592017 GPR132Q9UNW8 380 aa10.66□□□□□ -0.7
CLIP3-205ENST00000592017 KMT2CQ8NEZ4 4911 aaKnown RBP10.65□□□□□ -0.7
CLIP3-205ENST00000592017 HUWE1Q7Z6Z7 4374 aaKnown RBP10.65□□□□□ -0.7
CLIP3-205ENST00000592017 MFSD2BA6NFX1 497 aa10.65□□□□□ -0.7
CLIP3-205ENST00000592017 CYB5BO43169 146 aa10.65□□□□□ -0.7
CLIP3-205ENST00000592017 HLA-AP01891 365 aaKnown RBP10.65□□□□□ -0.7
CLIP3-205ENST00000592017 UCP1P25874 307 aa10.65□□□□□ -0.7
CLIP3-205ENST00000592017 KLF5Q13887 457 aaPredicted RBP10.65□□□□□ -0.7
CLIP3-205ENST00000592017 TATDN3Q17R31 274 aa10.65□□□□□ -0.7
CLIP3-205ENST00000592017 SPINK9Q5DT21 86 aa10.65□□□□□ -0.7
CLIP3-205ENST00000592017 ZNF57Q68EA5 555 aaPredicted RBP10.65□□□□□ -0.7
CLIP3-205ENST00000592017 SLC25A24Q6NUK1 477 aa10.65□□□□□ -0.7
CLIP3-205ENST00000592017 CLEC19AQ6UXS0 136 aa10.65□□□□□ -0.7
CLIP3-205ENST00000592017 OR9G4Q8NGQ1 327 aa10.65□□□□□ -0.7
CLIP3-205ENST00000592017 OR6Q1Q8NGQ2 317 aa10.65□□□□□ -0.7
CLIP3-205ENST00000592017 RRNAD1Q96FB5 475 aaKnown RBP10.65□□□□□ -0.7
CLIP3-205ENST00000592017 CCDC140Q96MF4 163 aa10.65□□□□□ -0.7
CLIP3-205ENST00000592017 THYN1Q9P016 225 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms