RNA–Protein interactions for RNA: ENST00000591595.5

SMARCA4-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,377 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-217ENST00000591595 C8orf86Q6ZUL3 223 aa10.23□□□□□ -0.77
SMARCA4-217ENST00000591595 YRDCQ86U90 279 aaKnown RBP10.23□□□□□ -0.77
SMARCA4-217ENST00000591595 STPG3Q8N7X2 389 aa10.23□□□□□ -0.77
SMARCA4-217ENST00000591595 FADS6Q8N9I5 356 aa10.23□□□□□ -0.77
SMARCA4-217ENST00000591595 C18orf32Q8TCD1 76 aa10.23□□□□□ -0.77
SMARCA4-217ENST00000591595 STRADBQ9C0K7 418 aa10.23□□□□□ -0.77
SMARCA4-217ENST00000591595 IL36BQ9NZH7 164 aa10.23□□□□□ -0.77
SMARCA4-217ENST00000591595 C3orf85A0A1B0GTC6 90 aa10.23□□□□□ -0.77
SMARCA4-217ENST00000591595 CHST1O43916 411 aa10.23□□□□□ -0.77
SMARCA4-217ENST00000591595 IGHV3-9P01782 118 aa10.23□□□□□ -0.77
SMARCA4-217ENST00000591595 ABHD17BQ5VST6 288 aa10.23□□□□□ -0.77
SMARCA4-217ENST00000591595 FAM27BQ5VT28 67 aa10.23□□□□□ -0.77
SMARCA4-217ENST00000591595 RPP25LQ8N5L8 163 aaKnown RBP10.23□□□□□ -0.77
SMARCA4-217ENST00000591595 TMEM54Q969K7 222 aa10.23□□□□□ -0.77
SMARCA4-217ENST00000591595 RAB37Q96AX2 223 aa10.23□□□□□ -0.77
SMARCA4-217ENST00000591595 SPAG8Q99932 426 aaPredicted RBP10.23□□□□□ -0.77
SMARCA4-217ENST00000591595 SCRT2Q9NQ03 307 aa10.23□□□□□ -0.77
SMARCA4-217ENST00000591595 MRPS17Q9Y2R5 130 aaKnown RBP10.23□□□□□ -0.77
SMARCA4-217ENST00000591595 IGKV1-12A0A0C4DH73 117 aa10.22□□□□□ -0.77
SMARCA4-217ENST00000591595 A0A1W2PQM1 296 aa10.22□□□□□ -0.77
SMARCA4-217ENST00000591595 VWC2LB2RUY7 222 aa10.22□□□□□ -0.77
SMARCA4-217ENST00000591595 C11orf94C9JXX5 98 aa10.22□□□□□ -0.77
SMARCA4-217ENST00000591595 PDCD6O75340 191 aa10.22□□□□□ -0.77
SMARCA4-217ENST00000591595 PPYP01298 95 aa10.22□□□□□ -0.77
SMARCA4-217ENST00000591595 IGKV1D-12P01611 117 aa10.22□□□□□ -0.77
SMARCA4-217ENST00000591595 LGALS4P56470 323 aa10.22□□□□□ -0.77
SMARCA4-217ENST00000591595 RNF138Q8WVD3 245 aa10.22□□□□□ -0.77
SMARCA4-217ENST00000591595 SLC25A22Q9H936 323 aa10.22□□□□□ -0.77
SMARCA4-217ENST00000591595 SPANXB1Q9NS25 103 aaPredicted RBP10.22□□□□□ -0.77
SMARCA4-217ENST00000591595 KBTBD11-OT1A0A1B0GTJ5 212 aa10.22□□□□□ -0.77
SMARCA4-217ENST00000591595 C2orf70A6NJV1 201 aa10.22□□□□□ -0.77
SMARCA4-217ENST00000591595 MT-ND6P03923 174 aa10.22□□□□□ -0.77
SMARCA4-217ENST00000591595 DSCR4P56555 118 aaPredicted RBP10.22□□□□□ -0.77
SMARCA4-217ENST00000591595 KIR3DS1Q14943 382 aa10.22□□□□□ -0.77
SMARCA4-217ENST00000591595 ACSM6Q6P461 480 aa10.22□□□□□ -0.77
SMARCA4-217ENST00000591595 AAED1Q7RTV5 226 aa10.22□□□□□ -0.77
SMARCA4-217ENST00000591595 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.22□□□□□ -0.77
SMARCA4-217ENST00000591595 OCIAD1Q9NX40 245 aa10.22□□□□□ -0.77
SMARCA4-217ENST00000591595 IGHV5-10-1A0A0J9YXX1 117 aa10.22□□□□□ -0.77
SMARCA4-217ENST00000591595 ZNHIT1O43257 154 aa10.22□□□□□ -0.77
SMARCA4-217ENST00000591595 OR10D3Q8NH80 312 aa10.22□□□□□ -0.77
SMARCA4-217ENST00000591595 ABHD14BQ96IU4 210 aa10.22□□□□□ -0.77
SMARCA4-217ENST00000591595 TMEM70Q9BUB7 260 aa10.22□□□□□ -0.77
SMARCA4-217ENST00000591595 VCX2Q9H322 139 aa10.22□□□□□ -0.77
SMARCA4-217ENST00000591595 ZNF576Q9H609 170 aa10.22□□□□□ -0.77
SMARCA4-217ENST00000591595 FSCN3Q9NQT6 498 aa10.22□□□□□ -0.77
SMARCA4-217ENST00000591595 ADAM20O43506 726 aa10.21□□□□□ -0.77
SMARCA4-217ENST00000591595 SSR4P51571 173 aa10.21□□□□□ -0.77
SMARCA4-217ENST00000591595 RPS18P62269 152 aaKnown RBP10.21□□□□□ -0.77
SMARCA4-217ENST00000591595 ZNF611Q8N823 705 aa10.21□□□□□ -0.77
SMARCA4-217ENST00000591595 DEGS1O15121 323 aa10.21□□□□□ -0.78
SMARCA4-217ENST00000591595 NDUFB4O95168 129 aa10.21□□□□□ -0.78
SMARCA4-217ENST00000591595 LIFP15018 202 aa10.21□□□□□ -0.78
SMARCA4-217ENST00000591595 CEACAM16Q2WEN9 425 aa10.21□□□□□ -0.78
SMARCA4-217ENST00000591595 BPIFA4PQ86YQ2 179 aa10.21□□□□□ -0.78
SMARCA4-217ENST00000591595 SRSF8Q9BRL6 282 aaKnown RBP10.21□□□□□ -0.78
SMARCA4-217ENST00000591595 C1QTNF4Q9BXJ3 329 aa10.21□□□□□ -0.78
SMARCA4-217ENST00000591595 SRXN1Q9BYN0 137 aa10.21□□□□□ -0.78
SMARCA4-217ENST00000591595 CYSLTR1Q9Y271 337 aa10.21□□□□□ -0.78
SMARCA4-217ENST00000591595 ZNF257Q9Y2Q1 563 aa10.21□□□□□ -0.78
SMARCA4-217ENST00000591595 NKX2-8O15522 239 aa10.2□□□□□ -0.78
SMARCA4-217ENST00000591595 IGKV1D-33P01593 117 aa10.2□□□□□ -0.78
SMARCA4-217ENST00000591595 IGKV1-33P01594 117 aa10.2□□□□□ -0.78
SMARCA4-217ENST00000591595 F2RP25116 425 aa10.2□□□□□ -0.78
SMARCA4-217ENST00000591595 GNB1P62873 340 aa10.2□□□□□ -0.78
SMARCA4-217ENST00000591595 TBC1D26Q86UD7 250 aa10.2□□□□□ -0.78
SMARCA4-217ENST00000591595 RPS19BP1Q86WX3 136 aaKnown RBP10.2□□□□□ -0.78
SMARCA4-217ENST00000591595 OR5D13Q8NGL4 314 aa10.2□□□□□ -0.78
SMARCA4-217ENST00000591595 LSM10Q969L4 123 aaKnown RBP10.2□□□□□ -0.78
SMARCA4-217ENST00000591595 APOBEC3DQ96AK3 386 aaPredicted RBP10.2□□□□□ -0.78
SMARCA4-217ENST00000591595 GRAMD2BQ96HH9 432 aa10.2□□□□□ -0.78
SMARCA4-217ENST00000591595 SH2D2AQ9NP31 389 aa10.2□□□□□ -0.78
SMARCA4-217ENST00000591595 ZNF835Q9Y2P0 537 aa10.2□□□□□ -0.78
SMARCA4-217ENST00000591595 CXCL13O43927 109 aa10.2□□□□□ -0.78
SMARCA4-217ENST00000591595 CER1O95813 267 aa10.2□□□□□ -0.78
SMARCA4-217ENST00000591595 GNG3P63215 75 aa10.2□□□□□ -0.78
SMARCA4-217ENST00000591595 TNXAQ16473 311 aa10.2□□□□□ -0.78
SMARCA4-217ENST00000591595 MED12LQ86YW9 2145 aa10.2□□□□□ -0.78
SMARCA4-217ENST00000591595 HILPDAQ9Y5L2 63 aa10.2□□□□□ -0.78
SMARCA4-217ENST00000591595 BMPR1BO00238 502 aa10.2□□□□□ -0.78
SMARCA4-217ENST00000591595 SYNGR3O43761 229 aa10.2□□□□□ -0.78
SMARCA4-217ENST00000591595 ZIC3O60481 467 aa10.2□□□□□ -0.78
SMARCA4-217ENST00000591595 NEURL1O76050 574 aa10.2□□□□□ -0.78
SMARCA4-217ENST00000591595 NAPSAO96009 420 aa10.2□□□□□ -0.78
SMARCA4-217ENST00000591595 CRYAAP02489 173 aa10.2□□□□□ -0.78
SMARCA4-217ENST00000591595 PLA2G5P39877 138 aa10.2□□□□□ -0.78
SMARCA4-217ENST00000591595 DHRS13Q6UX07 377 aa10.2□□□□□ -0.78
SMARCA4-217ENST00000591595 C2orf91Q6ZV80 131 aa10.2□□□□□ -0.78
SMARCA4-217ENST00000591595 TPRX1Q8N7U7 411 aa10.2□□□□□ -0.78
SMARCA4-217ENST00000591595 NAT6Q93015 286 aa10.2□□□□□ -0.78
SMARCA4-217ENST00000591595 FOXB1Q99853 325 aa10.2□□□□□ -0.78
SMARCA4-217ENST00000591595 VPREB3Q9UKI3 123 aa10.2□□□□□ -0.78
SMARCA4-217ENST00000591595 CACNA1EQ15878 2313 aa10.19□□□□□ -0.78
SMARCA4-217ENST00000591595 SPINK2P20155 84 aa10.19□□□□□ -0.78
SMARCA4-217ENST00000591595 CRYGSP22914 178 aa10.19□□□□□ -0.78
SMARCA4-217ENST00000591595 PCOLCEQ15113 449 aa10.19□□□□□ -0.78
SMARCA4-217ENST00000591595 WDR5BQ86VZ2 330 aa10.19□□□□□ -0.78
SMARCA4-217ENST00000591595 TMEM251Q8N6I4 163 aa10.19□□□□□ -0.78
SMARCA4-217ENST00000591595 KIR3DL3Q8N743 410 aa10.19□□□□□ -0.78
SMARCA4-217ENST00000591595 CLDN23Q96B33 292 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms