RNA–Protein interactions for RNA: ENST00000590704.5

CIRBP-229, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,456 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-229ENST00000590704 NPIPB5A8MRT5 1133 aa16.31■□□□□ 0.2
CIRBP-229ENST00000590704 CENPXA8MT69 81 aa16.31■□□□□ 0.2
CIRBP-229ENST00000590704 M0QZ24 198 aa16.31■□□□□ 0.2
CIRBP-229ENST00000590704 TCRBP04435 133 aa16.31■□□□□ 0.2
CIRBP-229ENST00000590704 ANXA7P20073 488 aaKnown RBP16.31■□□□□ 0.2
CIRBP-229ENST00000590704 C2orf68Q2NKX9 166 aa16.31■□□□□ 0.2
CIRBP-229ENST00000590704 NMSQ5H8A3 153 aa16.31■□□□□ 0.2
CIRBP-229ENST00000590704 TMEM268Q5VZI3 342 aa16.31■□□□□ 0.2
CIRBP-229ENST00000590704 ZNF429Q86V71 674 aa16.31■□□□□ 0.2
CIRBP-229ENST00000590704 SLC35G3Q8N808 338 aa16.31■□□□□ 0.2
CIRBP-229ENST00000590704 IL22RA2Q969J5 263 aa16.31■□□□□ 0.2
CIRBP-229ENST00000590704 KCNIP3Q9Y2W7 256 aa16.31■□□□□ 0.2
CIRBP-229ENST00000590704 OR51B2Q9Y5P1 312 aa16.31■□□□□ 0.2
CIRBP-229ENST00000590704 H3BUA1 57 aa16.3■□□□□ 0.2
CIRBP-229ENST00000590704 PSMB6P28072 239 aa16.3■□□□□ 0.2
CIRBP-229ENST00000590704 ZNF695Q8IW36 515 aa16.3■□□□□ 0.2
CIRBP-229ENST00000590704 LRTM2Q8N967 370 aa16.3■□□□□ 0.2
CIRBP-229ENST00000590704 OR1L8Q8NGR8 309 aa16.3■□□□□ 0.2
CIRBP-229ENST00000590704 RAX2Q96IS3 184 aa16.3■□□□□ 0.2
CIRBP-229ENST00000590704 DUX3Q96PT4 197 aa16.3■□□□□ 0.2
CIRBP-229ENST00000590704 P2RX4Q99571 388 aa16.3■□□□□ 0.2
CIRBP-229ENST00000590704 PHB2Q99623 299 aa16.3■□□□□ 0.2
CIRBP-229ENST00000590704 PRNDQ9UKY0 176 aa16.3■□□□□ 0.2
CIRBP-229ENST00000590704 C9orf170A2RU37 121 aa16.29■□□□□ 0.2
CIRBP-229ENST00000590704 REG1AP05451 166 aa16.29■□□□□ 0.2
CIRBP-229ENST00000590704 MECP2P51608 486 aaKnown RBP16.29■□□□□ 0.2
CIRBP-229ENST00000590704 MFAP2P55001 183 aa16.29■□□□□ 0.2
CIRBP-229ENST00000590704 RUNX1Q01196 453 aa16.29■□□□□ 0.2
CIRBP-229ENST00000590704 DEFB136Q30KP8 78 aa16.29■□□□□ 0.2
CIRBP-229ENST00000590704 OR5B3Q8NH48 314 aa16.29■□□□□ 0.2
CIRBP-229ENST00000590704 LSM10Q969L4 123 aaKnown RBP16.29■□□□□ 0.2
CIRBP-229ENST00000590704 TSC22D3Q99576 134 aa16.29■□□□□ 0.2
CIRBP-229ENST00000590704 SRSF8Q9BRL6 282 aaKnown RBP16.29■□□□□ 0.2
CIRBP-229ENST00000590704 COMMD5Q9GZQ3 224 aa16.29■□□□□ 0.2
CIRBP-229ENST00000590704 ALX4Q9H161 411 aaPredicted RBP16.29■□□□□ 0.2
CIRBP-229ENST00000590704 ZNF257Q9Y2Q1 563 aa16.29■□□□□ 0.2
CIRBP-229ENST00000590704 SNAPC5O75971 98 aa16.29■□□□□ 0.2
CIRBP-229ENST00000590704 TRAPPC2P0DI81 140 aa16.29■□□□□ 0.2
CIRBP-229ENST00000590704 TRAPPC2BP0DI82 140 aa16.29■□□□□ 0.2
CIRBP-229ENST00000590704 HSPE1P61604 102 aaKnown RBP16.29■□□□□ 0.2
CIRBP-229ENST00000590704 KHDC1LQ5JSQ8 128 aa16.29■□□□□ 0.2
CIRBP-229ENST00000590704 TMEM65Q6PI78 240 aa16.29■□□□□ 0.2
CIRBP-229ENST00000590704 TREML4Q6UXN2 200 aa16.29■□□□□ 0.2
CIRBP-229ENST00000590704 KLHL30-AS1Q8NEE0 82 aa16.29■□□□□ 0.2
CIRBP-229ENST00000590704 C4orf3Q8WVX3 66 aa16.29■□□□□ 0.2
CIRBP-229ENST00000590704 SLA2Q9H6Q3 261 aa16.29■□□□□ 0.2
CIRBP-229ENST00000590704 A0A0B4J2A0 478 aa16.28■□□□□ 0.2
CIRBP-229ENST00000590704 ST8SIA3O43173 380 aa16.28■□□□□ 0.2
CIRBP-229ENST00000590704 TRGV3P03979 118 aa16.28■□□□□ 0.2
CIRBP-229ENST00000590704 OR4E1P0C645 316 aa16.28■□□□□ 0.2
CIRBP-229ENST00000590704 AKR1C2P52895 323 aa16.28■□□□□ 0.2
CIRBP-229ENST00000590704 UBE2MP61081 183 aaKnown RBP16.28■□□□□ 0.2
CIRBP-229ENST00000590704 FAM219AQ8IW50 185 aa16.28■□□□□ 0.2
CIRBP-229ENST00000590704 WFDC9Q8NEX5 89 aa16.28■□□□□ 0.2
CIRBP-229ENST00000590704 C20orf85Q9H1P6 137 aa16.28■□□□□ 0.2
CIRBP-229ENST00000590704 SHPKQ9UHJ6 478 aa16.28■□□□□ 0.2
CIRBP-229ENST00000590704 TPPP2P59282 170 aa16.27■□□□□ 0.19
CIRBP-229ENST00000590704 DHRS2Q13268 280 aa16.27■□□□□ 0.19
CIRBP-229ENST00000590704 FHL3Q13643 280 aa16.27■□□□□ 0.19
CIRBP-229ENST00000590704 OR4A16Q8NH70 328 aa16.27■□□□□ 0.19
CIRBP-229ENST00000590704 OR5B12Q96R08 314 aa16.27■□□□□ 0.19
CIRBP-229ENST00000590704 COA4Q9NYJ1 87 aa16.27■□□□□ 0.19
CIRBP-229ENST00000590704 FKBP11Q9NYL4 201 aa16.27■□□□□ 0.19
CIRBP-229ENST00000590704 IGLV11-55A0A075B6I3 123 aa16.26■□□□□ 0.19
CIRBP-229ENST00000590704 VAMP1P23763 118 aa16.26■□□□□ 0.19
CIRBP-229ENST00000590704 PRCDQ00LT1 54 aa16.26■□□□□ 0.19
CIRBP-229ENST00000590704 LGI3Q8N145 548 aa16.26■□□□□ 0.19
CIRBP-229ENST00000590704 DUSP18Q8NEJ0 188 aa16.26■□□□□ 0.19
CIRBP-229ENST00000590704 OR4F17Q8NGA8 305 aa16.26■□□□□ 0.19
CIRBP-229ENST00000590704 OR52B4Q8NGK2 314 aa16.26■□□□□ 0.19
CIRBP-229ENST00000590704 OR4F4Q96R69 305 aa16.26■□□□□ 0.19
CIRBP-229ENST00000590704 TRAV6A0A075B6T7 132 aa16.25■□□□□ 0.19
CIRBP-229ENST00000590704 PITX3O75364 302 aa16.25■□□□□ 0.19
CIRBP-229ENST00000590704 NDUFB8O95169 186 aa16.25■□□□□ 0.19
CIRBP-229ENST00000590704 IGHV3-11P01762 117 aa16.25■□□□□ 0.19
CIRBP-229ENST00000590704 OR13C7P0DN81 318 aa16.25■□□□□ 0.19
CIRBP-229ENST00000590704 PDLIM3Q53GG5 364 aaPredicted RBP16.25■□□□□ 0.19
CIRBP-229ENST00000590704 SPINK9Q5DT21 86 aa16.25■□□□□ 0.19
CIRBP-229ENST00000590704 C11orf87Q6NUJ2 197 aa16.25■□□□□ 0.19
CIRBP-229ENST00000590704 LYG2Q86SG7 212 aa16.25■□□□□ 0.19
CIRBP-229ENST00000590704 MRPL41Q8IXM3 137 aaKnown RBP16.25■□□□□ 0.19
CIRBP-229ENST00000590704 LINC00482Q8N8I6 264 aa16.25■□□□□ 0.19
CIRBP-229ENST00000590704 RRNAD1Q96FB5 475 aaKnown RBP16.25■□□□□ 0.19
CIRBP-229ENST00000590704 ZNF355PQ9NSJ1 428 aa16.25■□□□□ 0.19
CIRBP-229ENST00000590704 CACNG5Q9UF02 275 aa16.25■□□□□ 0.19
CIRBP-229ENST00000590704 INS-IGF2F8WCM5 200 aa16.24■□□□□ 0.19
CIRBP-229ENST00000590704 CCL24O00175 119 aa16.24■□□□□ 0.19
CIRBP-229ENST00000590704 ATG12O94817 140 aa16.24■□□□□ 0.19
CIRBP-229ENST00000590704 RHOGP84095 191 aa16.24■□□□□ 0.19
CIRBP-229ENST00000590704 THOC7Q6I9Y2 204 aaKnown RBP16.24■□□□□ 0.19
CIRBP-229ENST00000590704 ZNF343Q6P1L6 599 aa16.24■□□□□ 0.19
CIRBP-229ENST00000590704 NRARPQ7Z6K4 114 aa16.24■□□□□ 0.19
CIRBP-229ENST00000590704 OR2C3Q8N628 320 aa16.24■□□□□ 0.19
CIRBP-229ENST00000590704 NUDT15Q9NV35 164 aa16.24■□□□□ 0.19
CIRBP-229ENST00000590704 OR2J3O76001 311 aa16.23■□□□□ 0.19
CIRBP-229ENST00000590704 TRBV12-3P01733 135 aa16.23■□□□□ 0.19
CIRBP-229ENST00000590704 LGALS1P09382 135 aaKnown RBP16.23■□□□□ 0.19
CIRBP-229ENST00000590704 MYCNOSP40205 109 aa16.23■□□□□ 0.19
CIRBP-229ENST00000590704 PVRIGQ6DKI7 326 aa16.23■□□□□ 0.19
CIRBP-229ENST00000590704 HINT2Q9BX68 163 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms