RNA–Protein interactions for RNA: ENST00000589285.1

ZNF540-207, Transcript of zinc finger protein 540, humanhuman

Gene ZNF540, Length 3,106 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-207ENST00000589285 RBPMSQ93062 196 aaKnown RBP2.62□□□□□ -1.99
ZNF540-207ENST00000589285 REG4Q9BYZ8 158 aa2.62□□□□□ -1.99
ZNF540-207ENST00000589285 SLC5A7Q9GZV3 580 aa2.62□□□□□ -1.99
ZNF540-207ENST00000589285 GAL3ST2Q9H3Q3 398 aa2.62□□□□□ -1.99
ZNF540-207ENST00000589285 OPA3Q9H6K4 179 aa2.62□□□□□ -1.99
ZNF540-207ENST00000589285 ZNF286AQ9HBT8 521 aa2.62□□□□□ -1.99
ZNF540-207ENST00000589285 ANXA10Q9UJ72 324 aa2.62□□□□□ -1.99
ZNF540-207ENST00000589285 NOP16Q9Y3C1 178 aaKnown RBP2.62□□□□□ -1.99
ZNF540-207ENST00000589285 TMED3Q9Y3Q3 217 aa2.62□□□□□ -1.99
ZNF540-207ENST00000589285 PYGO1Q9Y3Y4 419 aa2.62□□□□□ -1.99
ZNF540-207ENST00000589285 NUBP2Q9Y5Y2 271 aa2.62□□□□□ -1.99
ZNF540-207ENST00000589285 TRGV10A0A0A0MS01 117 aa2.62□□□□□ -1.99
ZNF540-207ENST00000589285 INMT-MINDY4F8WBC2 141 aa2.62□□□□□ -1.99
ZNF540-207ENST00000589285 GABARAPH6UMI1 98 aa2.62□□□□□ -1.99
ZNF540-207ENST00000589285 UBE2CO00762 179 aa2.62□□□□□ -1.99
ZNF540-207ENST00000589285 ZNF737O75373 536 aa2.62□□□□□ -1.99
ZNF540-207ENST00000589285 EIF3GO75821 320 aaKnown RBP eCLIP2.62□□□□□ -1.99
ZNF540-207ENST00000589285 AKAIN1P0CW23 69 aa2.62□□□□□ -1.99
ZNF540-207ENST00000589285 RD3LP0DJH9 198 aa2.62□□□□□ -1.99
ZNF540-207ENST00000589285 GNRHRP30968 328 aa2.62□□□□□ -1.99
ZNF540-207ENST00000589285 MDH2P40926 338 aaKnown RBP2.62□□□□□ -1.99
ZNF540-207ENST00000589285 CD200P41217 278 aa2.62□□□□□ -1.99
ZNF540-207ENST00000589285 ACTBP60709 375 aa2.62□□□□□ -1.99
ZNF540-207ENST00000589285 ERVK11-1P61568 191 aa2.62□□□□□ -1.99
ZNF540-207ENST00000589285 SNRPEP62304 92 aaKnown RBP2.62□□□□□ -1.99
ZNF540-207ENST00000589285 ACTG1P63261 375 aa2.62□□□□□ -1.99
ZNF540-207ENST00000589285 PITPNAQ00169 270 aa2.62□□□□□ -1.99
ZNF540-207ENST00000589285 ASAH1Q13510 395 aa2.62□□□□□ -1.99
ZNF540-207ENST00000589285 USF2Q15853 346 aaPredicted RBP2.62□□□□□ -1.99
ZNF540-207ENST00000589285 TATDN3Q17R31 274 aa2.62□□□□□ -1.99
ZNF540-207ENST00000589285 AADACL3Q5VUY0 350 aa2.62□□□□□ -1.99
ZNF540-207ENST00000589285 WDR25Q64LD2 544 aaPredicted RBP2.62□□□□□ -1.99
ZNF540-207ENST00000589285 ELP2Q6IA86 826 aa2.62□□□□□ -1.99
ZNF540-207ENST00000589285 GAPTQ8N292 157 aa2.62□□□□□ -1.99
ZNF540-207ENST00000589285 PXT1Q8NFP0 134 aa2.62□□□□□ -1.99
ZNF540-207ENST00000589285 OR8B3Q8NGG8 313 aa2.62□□□□□ -1.99
ZNF540-207ENST00000589285 OR10X1Q8NGY0 326 aa2.62□□□□□ -1.99
ZNF540-207ENST00000589285 GPX8Q8TED1 209 aa2.62□□□□□ -1.99
ZNF540-207ENST00000589285 GALMQ96C23 342 aa2.62□□□□□ -1.99
ZNF540-207ENST00000589285 LINC00052Q96N35 136 aa2.62□□□□□ -1.99
ZNF540-207ENST00000589285 OR8B2Q96RD0 313 aa2.62□□□□□ -1.99
ZNF540-207ENST00000589285 CITED1Q99966 193 aa2.62□□□□□ -1.99
ZNF540-207ENST00000589285 TCEAL7Q9BRU2 100 aa2.62□□□□□ -1.99
ZNF540-207ENST00000589285 C2orf88Q9BSF0 95 aa2.62□□□□□ -1.99
ZNF540-207ENST00000589285 MAGT1Q9H0U3 335 aa2.62□□□□□ -1.99
ZNF540-207ENST00000589285 HEXA-AS1Q9H8Q6 139 aa2.62□□□□□ -1.99
ZNF540-207ENST00000589285 MYOZ1Q9NP98 299 aaPredicted RBP2.62□□□□□ -1.99
ZNF540-207ENST00000589285 NECAP2Q9NVZ3 263 aa2.62□□□□□ -1.99
ZNF540-207ENST00000589285 MED9Q9NWA0 146 aa2.62□□□□□ -1.99
ZNF540-207ENST00000589285 CALYQ9NYX4 217 aa2.62□□□□□ -1.99
ZNF540-207ENST00000589285 MTFP1Q9UDX5 166 aa2.62□□□□□ -1.99
ZNF540-207ENST00000589285 ETV7Q9Y603 341 aa2.62□□□□□ -1.99
ZNF540-207ENST00000589285 S4R3C0 116 aa2.62□□□□□ -1.99
ZNF540-207ENST00000589285 NBEAL2Q6ZNJ1 2754 aa2.61□□□□□ -1.99
ZNF540-207ENST00000589285 IGHV3-21A0A0B4J1V1 117 aa2.61□□□□□ -1.99
ZNF540-207ENST00000589285 A0A1W2PPQ1 181 aa2.61□□□□□ -1.99
ZNF540-207ENST00000589285 TMEM30CPA0ZSE6 113 aa2.61□□□□□ -1.99
ZNF540-207ENST00000589285 K7N7A8 449 aa2.61□□□□□ -1.99
ZNF540-207ENST00000589285 M0R1X1 148 aa2.61□□□□□ -1.99
ZNF540-207ENST00000589285 DNASE2O00115 360 aaPredicted RBP2.61□□□□□ -1.99
ZNF540-207ENST00000589285 CCL24O00175 119 aa2.61□□□□□ -1.99
ZNF540-207ENST00000589285 ARPC5O15511 151 aa2.61□□□□□ -1.99
ZNF540-207ENST00000589285 FCGR3BO75015 233 aa2.61□□□□□ -1.99
ZNF540-207ENST00000589285 DUS4LO95620 317 aaKnown RBP2.61□□□□□ -1.99
ZNF540-207ENST00000589285 TCRBP04435 133 aa2.61□□□□□ -1.99
ZNF540-207ENST00000589285 UBBP0CG47 229 aa2.61□□□□□ -1.99
ZNF540-207ENST00000589285 CD99P14209 185 aa2.61□□□□□ -1.99
ZNF540-207ENST00000589285 DTYMKP23919 212 aa2.61□□□□□ -1.99
ZNF540-207ENST00000589285 AKR1C2P52895 323 aa2.61□□□□□ -1.99
ZNF540-207ENST00000589285 PIGPP57054 158 aa2.61□□□□□ -1.99
ZNF540-207ENST00000589285 GNB1P62873 340 aa2.61□□□□□ -1.99
ZNF540-207ENST00000589285 TMEM187Q14656 261 aa2.61□□□□□ -1.99
ZNF540-207ENST00000589285 MEF2DQ14814 521 aa2.61□□□□□ -1.99
ZNF540-207ENST00000589285 STUMQ69YW2 141 aa2.61□□□□□ -1.99
ZNF540-207ENST00000589285 C11orf71Q6IPW1 123 aa2.61□□□□□ -1.99
ZNF540-207ENST00000589285 TRAT1Q6PIZ9 186 aa2.61□□□□□ -1.99
ZNF540-207ENST00000589285 ZNF818PQ6ZRF7 136 aa2.61□□□□□ -1.99
ZNF540-207ENST00000589285 C19orf35Q6ZS72 473 aa2.61□□□□□ -1.99
ZNF540-207ENST00000589285 MOB3BQ86TA1 216 aa2.61□□□□□ -1.99
ZNF540-207ENST00000589285 SPAG16Q8N0X2 631 aa2.61□□□□□ -1.99
ZNF540-207ENST00000589285 OR5AP2Q8NGF4 316 aa2.61□□□□□ -1.99
ZNF540-207ENST00000589285 SFT2D1Q8WV19 159 aa2.61□□□□□ -1.99
ZNF540-207ENST00000589285 TCTEX1D2Q8WW35 142 aa2.61□□□□□ -1.99
ZNF540-207ENST00000589285 C14orf144Q96I85 54 aa2.61□□□□□ -1.99
ZNF540-207ENST00000589285 HYLS1Q96M11 299 aa2.61□□□□□ -1.99
ZNF540-207ENST00000589285 PACRGQ96M98 296 aaPredicted RBP2.61□□□□□ -1.99
ZNF540-207ENST00000589285 FOXC2Q99958 501 aa2.61□□□□□ -1.99
ZNF540-207ENST00000589285 FAM103A1Q9BTL3 118 aaKnown RBP2.61□□□□□ -1.99
ZNF540-207ENST00000589285 PKIBQ9C010 78 aa2.61□□□□□ -1.99
ZNF540-207ENST00000589285 METTL8Q9H825 291 aaKnown RBP2.61□□□□□ -1.99
ZNF540-207ENST00000589285 HSPB11Q9Y547 144 aa2.61□□□□□ -1.99
ZNF540-207ENST00000589285 POMT1Q9Y6A1 747 aa2.61□□□□□ -1.99
ZNF540-207ENST00000589285 NCBP2LA6PVI3 153 aaKnown RBP2.61□□□□□ -1.99
ZNF540-207ENST00000589285 KRBOX1C9JBD0 128 aa2.61□□□□□ -1.99
ZNF540-207ENST00000589285 RAMP3O60896 148 aa2.61□□□□□ -1.99
ZNF540-207ENST00000589285 RP2O75695 350 aa2.61□□□□□ -1.99
ZNF540-207ENST00000589285 SCGB1D1O95968 90 aa2.61□□□□□ -1.99
ZNF540-207ENST00000589285 PPYP01298 95 aa2.61□□□□□ -1.99
ZNF540-207ENST00000589285 SNRPCP09234 159 aaKnown RBP2.61□□□□□ -1.99
ZNF540-207ENST00000589285 LINC00614P0C842 121 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms