RNA–Protein interactions for RNA: ENST00000587173.5

VAT1-205, Transcript of vesicle amine transport 1, humanhuman

TSL 2 BASIC

Gene VAT1, Length 1,174 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-205ENST00000587173 PLET1Q6UQ28 207 aa11.78□□□□□ -0.52
VAT1-205ENST00000587173 RBPMS2Q6ZRY4 209 aaKnown RBP11.78□□□□□ -0.52
VAT1-205ENST00000587173 TMEM61Q8N0U2 210 aa11.78□□□□□ -0.52
VAT1-205ENST00000587173 PLEKHA2Q9HB19 425 aa11.78□□□□□ -0.52
VAT1-205ENST00000587173 IFT46Q9NQC8 304 aa11.78□□□□□ -0.52
VAT1-205ENST00000587173 SMIM31A0A1B0GVY4 71 aa11.77□□□□□ -0.53
VAT1-205ENST00000587173 ZNF701M0R085 212 aaPredicted RBP11.77□□□□□ -0.53
VAT1-205ENST00000587173 ERVK-16P61578 105 aa11.77□□□□□ -0.53
VAT1-205ENST00000587173 ZNF818PQ6ZRF7 136 aa11.77□□□□□ -0.53
VAT1-205ENST00000587173 HSD17B13Q7Z5P4 300 aaPredicted RBP11.77□□□□□ -0.53
VAT1-205ENST00000587173 TMEM17Q86X19 198 aa11.77□□□□□ -0.53
VAT1-205ENST00000587173 OR51H1Q8NH63 302 aa11.77□□□□□ -0.53
VAT1-205ENST00000587173 MRPL27Q9P0M9 148 aaKnown RBP11.77□□□□□ -0.53
VAT1-205ENST00000587173 MLXQ9UH92 298 aa11.77□□□□□ -0.53
VAT1-205ENST00000587173 UFC1Q9Y3C8 167 aa11.77□□□□□ -0.53
VAT1-205ENST00000587173 TRAV3A0A0B4J244 114 aa11.76□□□□□ -0.53
VAT1-205ENST00000587173 TRAV25A0A0B4J276 109 aa11.76□□□□□ -0.53
VAT1-205ENST00000587173 MFSD2BA6NFX1 497 aa11.76□□□□□ -0.53
VAT1-205ENST00000587173 CGB1A6NKQ9 187 aa11.76□□□□□ -0.53
VAT1-205ENST00000587173 XRCC3O43542 346 aa11.76□□□□□ -0.53
VAT1-205ENST00000587173 SCAF4O95104 1147 aaKnown RBP11.76□□□□□ -0.53
VAT1-205ENST00000587173 FGF2P09038 288 aa11.76□□□□□ -0.53
VAT1-205ENST00000587173 TRAPPC2P0DI81 140 aa11.76□□□□□ -0.53
VAT1-205ENST00000587173 TRAPPC2BP0DI82 140 aa11.76□□□□□ -0.53
VAT1-205ENST00000587173 PTBP1P26599 531 aaKnown RBP eCLIP11.76□□□□□ -0.53
VAT1-205ENST00000587173 GPR183P32249 361 aa11.76□□□□□ -0.53
VAT1-205ENST00000587173 ELLP55199 621 aaPredicted RBP11.76□□□□□ -0.53
VAT1-205ENST00000587173 PLECQ15149 4684 aaKnown RBP11.76□□□□□ -0.53
VAT1-205ENST00000587173 ZNF585BQ52M93 769 aa11.76□□□□□ -0.53
VAT1-205ENST00000587173 TM4SF20Q53R12 229 aa11.76□□□□□ -0.53
VAT1-205ENST00000587173 THOC7Q6I9Y2 204 aaKnown RBP11.76□□□□□ -0.53
VAT1-205ENST00000587173 MZT2AQ6P582 158 aa11.76□□□□□ -0.53
VAT1-205ENST00000587173 BTNL8Q6UX41 500 aa11.76□□□□□ -0.53
VAT1-205ENST00000587173 GGTLC1Q9BX51 225 aa11.76□□□□□ -0.53
VAT1-205ENST00000587173 QTRT1Q9BXR0 403 aaKnown RBP11.76□□□□□ -0.53
VAT1-205ENST00000587173 TMEM140Q9NV12 185 aa11.76□□□□□ -0.53
VAT1-205ENST00000587173 EHFQ9NZC4 300 aa11.76□□□□□ -0.53
VAT1-205ENST00000587173 COMMD9Q9P000 198 aa11.76□□□□□ -0.53
VAT1-205ENST00000587173 RSL24D1Q9UHA3 163 aaKnown RBP11.76□□□□□ -0.53
VAT1-205ENST00000587173 IGLC7A0M8Q6 106 aa11.75□□□□□ -0.53
VAT1-205ENST00000587173 MEIS3P1A6NDR6 274 aa11.75□□□□□ -0.53
VAT1-205ENST00000587173 H3BMQ9 156 aa11.75□□□□□ -0.53
VAT1-205ENST00000587173 ZNF182P17025 639 aaPredicted RBP11.75□□□□□ -0.53
VAT1-205ENST00000587173 SLC25A24Q6NUK1 477 aa11.75□□□□□ -0.53
VAT1-205ENST00000587173 SLC38A6Q8IZM9 456 aa11.75□□□□□ -0.53
VAT1-205ENST00000587173 ZNF502Q8TBZ5 544 aa11.75□□□□□ -0.53
VAT1-205ENST00000587173 VN1R17PQ8TDU5 208 aa11.75□□□□□ -0.53
VAT1-205ENST00000587173 LOC102724200A0A096LPH7 203 aaPredicted RBP11.74□□□□□ -0.53
VAT1-205ENST00000587173 SNAPC5O75971 98 aa11.74□□□□□ -0.53
VAT1-205ENST00000587173 S1PR2O95136 353 aa11.74□□□□□ -0.53
VAT1-205ENST00000587173 C8orf88P0DMB2 117 aa11.74□□□□□ -0.53
VAT1-205ENST00000587173 OR13C7P0DN81 318 aa11.74□□□□□ -0.53
VAT1-205ENST00000587173 RPA2P15927 270 aa11.74□□□□□ -0.53
VAT1-205ENST00000587173 F2RP25116 425 aa11.74□□□□□ -0.53
VAT1-205ENST00000587173 GNRHRP30968 328 aa11.74□□□□□ -0.53
VAT1-205ENST00000587173 SPCS2Q15005 226 aa11.74□□□□□ -0.53
VAT1-205ENST00000587173 DHRS11Q6UWP2 260 aa11.74□□□□□ -0.53
VAT1-205ENST00000587173 UNQ9165/PRO28630Q6UXU0 137 aa11.74□□□□□ -0.53
VAT1-205ENST00000587173 CMTM1Q8IZ96 169 aa11.74□□□□□ -0.53
VAT1-205ENST00000587173 OR10W1Q8NGF6 305 aa11.74□□□□□ -0.53
VAT1-205ENST00000587173 OR1L6Q8NGR2 347 aa11.74□□□□□ -0.53
VAT1-205ENST00000587173 OR1L8Q8NGR8 309 aa11.74□□□□□ -0.53
VAT1-205ENST00000587173 OVOL2Q9BRP0 275 aa11.74□□□□□ -0.53
VAT1-205ENST00000587173 IGHV3-35A0A0C4DH35 117 aa11.73□□□□□ -0.53
VAT1-205ENST00000587173 TEX50A0A1B0GTY4 177 aa11.73□□□□□ -0.53
VAT1-205ENST00000587173 TGOLN2O43493 480 aa11.73□□□□□ -0.53
VAT1-205ENST00000587173 PGLYRP1O75594 196 aaPredicted RBP11.73□□□□□ -0.53
VAT1-205ENST00000587173 SERPINE2P07093 398 aa11.73□□□□□ -0.53
VAT1-205ENST00000587173 LPAR6P43657 344 aa11.73□□□□□ -0.53
VAT1-205ENST00000587173 RFX2P48378 723 aa11.73□□□□□ -0.53
VAT1-205ENST00000587173 TAS2R46P59540 309 aa11.73□□□□□ -0.53
VAT1-205ENST00000587173 UBE2NLQ5JXB2 153 aa11.73□□□□□ -0.53
VAT1-205ENST00000587173 TMEM69Q5SWH9 247 aa11.73□□□□□ -0.53
VAT1-205ENST00000587173 LAMTOR1Q6IAA8 161 aa11.73□□□□□ -0.53
VAT1-205ENST00000587173 OR2C3Q8N628 320 aa11.73□□□□□ -0.53
VAT1-205ENST00000587173 SAMD12Q8N8I0 201 aa11.73□□□□□ -0.53
VAT1-205ENST00000587173 GDPD1Q8N9F7 314 aa11.73□□□□□ -0.53
VAT1-205ENST00000587173 OR5H2Q8NGV7 314 aa11.73□□□□□ -0.53
VAT1-205ENST00000587173 OR6F1Q8NGZ6 308 aa11.73□□□□□ -0.53
VAT1-205ENST00000587173 DGCR14Q96DF8 476 aaKnown RBP11.73□□□□□ -0.53
VAT1-205ENST00000587173 CMTM3Q96MX0 182 aa11.73□□□□□ -0.53
VAT1-205ENST00000587173 ZNF2Q9BSG1 426 aaPredicted RBP11.73□□□□□ -0.53
VAT1-205ENST00000587173 HINT2Q9BX68 163 aa11.73□□□□□ -0.53
VAT1-205ENST00000587173 C5orf66Q9H5L9 145 aa11.73□□□□□ -0.53
VAT1-205ENST00000587173 CCDC59Q9P031 241 aaKnown RBP11.73□□□□□ -0.53
VAT1-205ENST00000587173 COMMD3Q9UBI1 195 aa11.73□□□□□ -0.53
VAT1-205ENST00000587173 MARCH11A6NNE9 402 aa11.72□□□□□ -0.53
VAT1-205ENST00000587173 KRASP01116 189 aa11.72□□□□□ -0.53
VAT1-205ENST00000587173 PMP2P02689 132 aa11.72□□□□□ -0.53
VAT1-205ENST00000587173 RLN1P04808 185 aa11.72□□□□□ -0.53
VAT1-205ENST00000587173 SPSB3Q6PJ21 355 aa11.72□□□□□ -0.53
VAT1-205ENST00000587173 DYNC2LI1Q8TCX1 351 aa11.72□□□□□ -0.53
VAT1-205ENST00000587173 MOB3AQ96BX8 217 aa11.72□□□□□ -0.53
VAT1-205ENST00000587173 ZNF436Q9C0F3 470 aaPredicted RBP11.72□□□□□ -0.53
VAT1-205ENST00000587173 RBM38Q9H0Z9 239 aaKnown RBP11.72□□□□□ -0.53
VAT1-205ENST00000587173 FKBP11Q9NYL4 201 aa11.72□□□□□ -0.53
VAT1-205ENST00000587173 ALMS1Q8TCU4 4167 aa11.71□□□□□ -0.53
VAT1-205ENST00000587173 S100GP29377 79 aa11.71□□□□□ -0.53
VAT1-205ENST00000587173 PRSS3P35030 304 aa11.71□□□□□ -0.53
VAT1-205ENST00000587173 TAS2R20P59543 309 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms