RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 PRR20EP86478 221 aa11.66□□□□□ -0.54
CDK5RAP3-237ENST00000585163 PRR20CP86479 221 aa11.66□□□□□ -0.54
CDK5RAP3-237ENST00000585163 PRR20DP86480 221 aa11.66□□□□□ -0.54
CDK5RAP3-237ENST00000585163 PRR20BP86481 221 aa11.66□□□□□ -0.54
CDK5RAP3-237ENST00000585163 PRR20AP86496 221 aa11.66□□□□□ -0.54
CDK5RAP3-237ENST00000585163 WFIKKN1Q96NZ8 548 aa11.66□□□□□ -0.54
CDK5RAP3-237ENST00000585163 IDI2-AS1Q9NZ38 188 aa11.66□□□□□ -0.54
CDK5RAP3-237ENST00000585163 A0A1B0GUS0 222 aa11.65□□□□□ -0.54
CDK5RAP3-237ENST00000585163 C9JCJ5 164 aa11.65□□□□□ -0.54
CDK5RAP3-237ENST00000585163 FNDC10F2Z333 226 aa11.65□□□□□ -0.54
CDK5RAP3-237ENST00000585163 K7EN84 100 aa11.65□□□□□ -0.54
CDK5RAP3-237ENST00000585163 FOXH1O75593 365 aa11.65□□□□□ -0.54
CDK5RAP3-237ENST00000585163 ADMP35318 185 aa11.65□□□□□ -0.54
CDK5RAP3-237ENST00000585163 KLF3P57682 345 aaPredicted RBP11.65□□□□□ -0.54
CDK5RAP3-237ENST00000585163 POU2AF1Q16633 256 aa11.65□□□□□ -0.54
CDK5RAP3-237ENST00000585163 SEM1Q6ZVN7 128 aa11.65□□□□□ -0.54
CDK5RAP3-237ENST00000585163 NEUROG1Q92886 237 aa11.65□□□□□ -0.54
CDK5RAP3-237ENST00000585163 MISP3Q96FF7 219 aa11.65□□□□□ -0.54
CDK5RAP3-237ENST00000585163 ENY2Q9NPA8 101 aa11.65□□□□□ -0.54
CDK5RAP3-237ENST00000585163 FKBP11Q9NYL4 201 aa11.65□□□□□ -0.54
CDK5RAP3-237ENST00000585163 LY96Q9Y6Y9 160 aa11.65□□□□□ -0.54
CDK5RAP3-237ENST00000585163 DSCAML1Q8TD84 2053 aa11.65□□□□□ -0.54
CDK5RAP3-237ENST00000585163 DSCAMO60469 2012 aa11.65□□□□□ -0.54
CDK5RAP3-237ENST00000585163 NUPR1O60356 82 aa11.65□□□□□ -0.54
CDK5RAP3-237ENST00000585163 GLRXP35754 106 aa11.65□□□□□ -0.54
CDK5RAP3-237ENST00000585163 FAM222BQ8WU58 562 aa11.65□□□□□ -0.54
CDK5RAP3-237ENST00000585163 ITLN1Q8WWA0 313 aa11.65□□□□□ -0.54
CDK5RAP3-237ENST00000585163 FAM122AQ96E09 287 aa11.65□□□□□ -0.54
CDK5RAP3-237ENST00000585163 ADTRPQ96IZ2 230 aa11.65□□□□□ -0.54
CDK5RAP3-237ENST00000585163 IL36BQ9NZH7 164 aa11.65□□□□□ -0.54
CDK5RAP3-237ENST00000585163 TRGV10A0A0A0MS01 117 aa11.64□□□□□ -0.55
CDK5RAP3-237ENST00000585163 MBD3L4A6NDZ8 208 aaPredicted RBP11.64□□□□□ -0.55
CDK5RAP3-237ENST00000585163 MBD3L3A6NE82 208 aaPredicted RBP11.64□□□□□ -0.55
CDK5RAP3-237ENST00000585163 MBD3L5A6NJ08 208 aaPredicted RBP11.64□□□□□ -0.55
CDK5RAP3-237ENST00000585163 A8MXE2 369 aa11.64□□□□□ -0.55
CDK5RAP3-237ENST00000585163 SPRY3O43610 288 aa11.64□□□□□ -0.55
CDK5RAP3-237ENST00000585163 AREGP15514 252 aa11.64□□□□□ -0.55
CDK5RAP3-237ENST00000585163 IGFBP2P18065 325 aa11.64□□□□□ -0.55
CDK5RAP3-237ENST00000585163 WT1P19544 449 aaPredicted RBP11.64□□□□□ -0.55
CDK5RAP3-237ENST00000585163 COL8A2P25067 703 aa11.64□□□□□ -0.55
CDK5RAP3-237ENST00000585163 SELENOTP62341 195 aa11.64□□□□□ -0.55
CDK5RAP3-237ENST00000585163 MRPS11P82912 194 aaKnown RBP11.64□□□□□ -0.55
CDK5RAP3-237ENST00000585163 HLA-DRB5Q30154 266 aa11.64□□□□□ -0.55
CDK5RAP3-237ENST00000585163 FAM201AQ5SY85 155 aa11.64□□□□□ -0.55
CDK5RAP3-237ENST00000585163 ZNF439Q8NDP4 499 aa11.64□□□□□ -0.55
CDK5RAP3-237ENST00000585163 OR4P4Q8NGL7 312 aa11.64□□□□□ -0.55
CDK5RAP3-237ENST00000585163 MBD3L2Q8NHZ7 208 aaPredicted RBP11.64□□□□□ -0.55
CDK5RAP3-237ENST00000585163 CORO2AQ92828 525 aa11.64□□□□□ -0.55
CDK5RAP3-237ENST00000585163 UHRF2Q96PU4 802 aa11.64□□□□□ -0.55
CDK5RAP3-237ENST00000585163 M0R1B8 84 aa11.64□□□□□ -0.55
CDK5RAP3-237ENST00000585163 SNRPCP09234 159 aaKnown RBP11.64□□□□□ -0.55
CDK5RAP3-237ENST00000585163 LINC00869P0C866 280 aa11.64□□□□□ -0.55
CDK5RAP3-237ENST00000585163 GATA4P43694 442 aa11.64□□□□□ -0.55
CDK5RAP3-237ENST00000585163 ZNF90Q03938 601 aa11.64□□□□□ -0.55
CDK5RAP3-237ENST00000585163 C1orf185Q5T7R7 199 aa11.64□□□□□ -0.55
CDK5RAP3-237ENST00000585163 LYG1Q8N1E2 194 aa11.64□□□□□ -0.55
CDK5RAP3-237ENST00000585163 SFXN3Q9BWM7 321 aa11.64□□□□□ -0.55
CDK5RAP3-237ENST00000585163 TP53TG5Q9Y2B4 290 aa11.64□□□□□ -0.55
CDK5RAP3-237ENST00000585163 ARL2-SNX15V9GYD0 113 aa11.64□□□□□ -0.55
CDK5RAP3-237ENST00000585163 CFAP47Q6ZTR5 3102 aa11.64□□□□□ -0.55
CDK5RAP3-237ENST00000585163 IGLV3-9A0A075B6K5 115 aa11.63□□□□□ -0.55
CDK5RAP3-237ENST00000585163 TIMM23BQ5SRD1 257 aa11.63□□□□□ -0.55
CDK5RAP3-237ENST00000585163 EAF1Q96JC9 268 aaPredicted RBP11.63□□□□□ -0.55
CDK5RAP3-237ENST00000585163 OR51B2Q9Y5P1 312 aa11.63□□□□□ -0.55
CDK5RAP3-237ENST00000585163 ZFHX4Q86UP3 3567 aa11.63□□□□□ -0.55
CDK5RAP3-237ENST00000585163 ASPMQ8IZT6 3477 aa11.63□□□□□ -0.55
CDK5RAP3-237ENST00000585163 CADP27708 2225 aa11.63□□□□□ -0.55
CDK5RAP3-237ENST00000585163 SLC17A3O00476 420 aa11.63□□□□□ -0.55
CDK5RAP3-237ENST00000585163 SCGB1D1O95968 90 aa11.63□□□□□ -0.55
CDK5RAP3-237ENST00000585163 MYOD1P15172 320 aa11.63□□□□□ -0.55
CDK5RAP3-237ENST00000585163 MIR17HGQ75NE6 70 aa11.63□□□□□ -0.55
CDK5RAP3-237ENST00000585163 ZCCHC14Q8WYQ9 949 aaKnown RBP11.63□□□□□ -0.55
CDK5RAP3-237ENST00000585163 MS4A10Q96PG2 267 aa11.63□□□□□ -0.55
CDK5RAP3-237ENST00000585163 SLC25A10Q9UBX3 287 aaPredicted RBP11.63□□□□□ -0.55
CDK5RAP3-237ENST00000585163 PRNDQ9UKY0 176 aa11.63□□□□□ -0.55
CDK5RAP3-237ENST00000585163 ZNF257Q9Y2Q1 563 aa11.63□□□□□ -0.55
CDK5RAP3-237ENST00000585163 CBLN1P23435 193 aa11.62□□□□□ -0.55
CDK5RAP3-237ENST00000585163 DUX4L9Q6RFH8 374 aaPredicted RBP11.62□□□□□ -0.55
CDK5RAP3-237ENST00000585163 VHLLQ6RSH7 139 aa11.62□□□□□ -0.55
CDK5RAP3-237ENST00000585163 HINT2Q9BX68 163 aa11.62□□□□□ -0.55
CDK5RAP3-237ENST00000585163 ASCL3Q9NQ33 180 aa11.62□□□□□ -0.55
CDK5RAP3-237ENST00000585163 SLC45A2Q9UMX9 530 aa11.62□□□□□ -0.55
CDK5RAP3-237ENST00000585163 BDP1A6H8Y1 2624 aa11.62□□□□□ -0.55
CDK5RAP3-237ENST00000585163 TANC2Q9HCD6 1990 aa11.62□□□□□ -0.55
CDK5RAP3-237ENST00000585163 GRIFINA4D1Z8 144 aa11.62□□□□□ -0.55
CDK5RAP3-237ENST00000585163 J3QR06 171 aa11.62□□□□□ -0.55
CDK5RAP3-237ENST00000585163 CRYABP02511 175 aaKnown RBP11.62□□□□□ -0.55
CDK5RAP3-237ENST00000585163 LGALS4P56470 323 aa11.62□□□□□ -0.55
CDK5RAP3-237ENST00000585163 PRCDQ00LT1 54 aa11.62□□□□□ -0.55
CDK5RAP3-237ENST00000585163 STUMQ69YW2 141 aa11.62□□□□□ -0.55
CDK5RAP3-237ENST00000585163 ZNF474Q6S9Z5 364 aaPredicted RBP11.62□□□□□ -0.55
CDK5RAP3-237ENST00000585163 TGIF2LXQ8IUE1 241 aa11.62□□□□□ -0.55
CDK5RAP3-237ENST00000585163 LINC00574Q9H8X3 128 aa11.62□□□□□ -0.55
CDK5RAP3-237ENST00000585163 RNF7Q9UBF6 113 aa11.62□□□□□ -0.55
CDK5RAP3-237ENST00000585163 NAGKQ9UJ70 344 aa11.62□□□□□ -0.55
CDK5RAP3-237ENST00000585163 TP53TG3Q9ULZ0 132 aa11.62□□□□□ -0.55
CDK5RAP3-237ENST00000585163 USF2Q15853 346 aaPredicted RBP11.61□□□□□ -0.55
CDK5RAP3-237ENST00000585163 C3orf36Q3SXR2 165 aa11.61□□□□□ -0.55
CDK5RAP3-237ENST00000585163 C1orf194Q5T5A4 169 aa11.61□□□□□ -0.55
CDK5RAP3-237ENST00000585163 CMTM2Q8TAZ6 248 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms