RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-231ENST00000584063 MKXQ8IYA7 352 aa9.68□□□□□ -0.86
CDK5RAP3-231ENST00000584063 ZNF808Q8N4W9 903 aaPredicted RBP9.68□□□□□ -0.86
CDK5RAP3-231ENST00000584063 SLC25A22Q9H936 323 aa9.68□□□□□ -0.86
CDK5RAP3-231ENST00000584063 SPTAN1Q13813 2472 aaKnown RBP9.68□□□□□ -0.86
CDK5RAP3-231ENST00000584063 B5MCH6 92 aa9.67□□□□□ -0.86
CDK5RAP3-231ENST00000584063 NDUFB8O95169 186 aa9.67□□□□□ -0.86
CDK5RAP3-231ENST00000584063 F2RP25116 425 aa9.67□□□□□ -0.86
CDK5RAP3-231ENST00000584063 FCGR2BP31994 310 aaPredicted RBP9.67□□□□□ -0.86
CDK5RAP3-231ENST00000584063 PPOXP50336 477 aa9.67□□□□□ -0.86
CDK5RAP3-231ENST00000584063 TAS2R30P59541 319 aa9.67□□□□□ -0.86
CDK5RAP3-231ENST00000584063 PCBD1P61457 104 aa9.67□□□□□ -0.86
CDK5RAP3-231ENST00000584063 VAMP3Q15836 100 aa9.67□□□□□ -0.86
CDK5RAP3-231ENST00000584063 PCSK4Q6UW60 755 aa9.67□□□□□ -0.86
CDK5RAP3-231ENST00000584063 OR10G9Q8NGN4 311 aa9.67□□□□□ -0.86
CDK5RAP3-231ENST00000584063 SCGB1C1Q8TD33 95 aa9.67□□□□□ -0.86
CDK5RAP3-231ENST00000584063 C1orf159Q96HA4 380 aa9.67□□□□□ -0.86
CDK5RAP3-231ENST00000584063 SIGMAR1Q99720 223 aa9.67□□□□□ -0.86
CDK5RAP3-231ENST00000584063 SPIN2AQ99865 258 aa9.67□□□□□ -0.86
CDK5RAP3-231ENST00000584063 SPIN2BQ9BPZ2 258 aa9.67□□□□□ -0.86
CDK5RAP3-231ENST00000584063 RBKSQ9H477 322 aa9.67□□□□□ -0.86
CDK5RAP3-231ENST00000584063 PSENENQ9NZ42 101 aa9.67□□□□□ -0.86
CDK5RAP3-231ENST00000584063 TRAV17A0A0B4J275 112 aa9.67□□□□□ -0.86
CDK5RAP3-231ENST00000584063 NBR2O15453 112 aa9.67□□□□□ -0.86
CDK5RAP3-231ENST00000584063 ZNF207O43670 478 aaKnown RBP9.67□□□□□ -0.86
CDK5RAP3-231ENST00000584063 IGHV3-13P01766 116 aa9.67□□□□□ -0.86
CDK5RAP3-231ENST00000584063 IGHV3-7P01780 117 aa9.67□□□□□ -0.86
CDK5RAP3-231ENST00000584063 GLIPR1P48060 266 aa9.67□□□□□ -0.86
CDK5RAP3-231ENST00000584063 GAGE5Q13069 117 aa9.67□□□□□ -0.86
CDK5RAP3-231ENST00000584063 GAGE6Q13070 117 aa9.67□□□□□ -0.86
CDK5RAP3-231ENST00000584063 FAM90A2PQ658T7 463 aa9.67□□□□□ -0.86
CDK5RAP3-231ENST00000584063 FAM214BQ7L5A3 538 aa9.67□□□□□ -0.86
CDK5RAP3-231ENST00000584063 HAPLN4Q86UW8 402 aa9.67□□□□□ -0.86
CDK5RAP3-231ENST00000584063 H1FOOQ8IZA3 346 aaPredicted RBP9.67□□□□□ -0.86
CDK5RAP3-231ENST00000584063 ZADH2Q8N4Q0 377 aa9.67□□□□□ -0.86
CDK5RAP3-231ENST00000584063 WDYHV1Q96HA8 205 aa9.67□□□□□ -0.86
CDK5RAP3-231ENST00000584063 SSBP4Q9BWG4 385 aaPredicted RBP9.67□□□□□ -0.86
CDK5RAP3-231ENST00000584063 ZNF71Q9NQZ8 489 aaPredicted RBP9.67□□□□□ -0.86
CDK5RAP3-231ENST00000584063 COL12A1Q99715 3063 aa9.66□□□□□ -0.86
CDK5RAP3-231ENST00000584063 TRAV24A0A0B4J272 114 aa9.66□□□□□ -0.86
CDK5RAP3-231ENST00000584063 OR5H1A6NKK0 313 aa9.66□□□□□ -0.86
CDK5RAP3-231ENST00000584063 GFRA3O60609 400 aa9.66□□□□□ -0.86
CDK5RAP3-231ENST00000584063 NAPSAO96009 420 aa9.66□□□□□ -0.86
CDK5RAP3-231ENST00000584063 KRASP01116 189 aa9.66□□□□□ -0.86
CDK5RAP3-231ENST00000584063 TYMSP04818 313 aa9.66□□□□□ -0.86
CDK5RAP3-231ENST00000584063 ZNF816Q0VGE8 651 aaPredicted RBP9.66□□□□□ -0.86
CDK5RAP3-231ENST00000584063 TPRX1Q8N7U7 411 aa9.66□□□□□ -0.86
CDK5RAP3-231ENST00000584063 MRPL30Q8TCC3 161 aaKnown RBP9.66□□□□□ -0.86
CDK5RAP3-231ENST00000584063 HIST1H2AAQ96QV6 131 aa9.66□□□□□ -0.86
CDK5RAP3-231ENST00000584063 CABLES2Q9BTV7 478 aa9.66□□□□□ -0.86
CDK5RAP3-231ENST00000584063 PRDM14Q9GZV8 571 aa9.66□□□□□ -0.86
CDK5RAP3-231ENST00000584063 ARFGEF3Q5TH69 2177 aa9.66□□□□□ -0.86
CDK5RAP3-231ENST00000584063 FAM90A8PA6NJQ4 464 aa9.66□□□□□ -0.86
CDK5RAP3-231ENST00000584063 FAM90A7PA6NKC0 464 aa9.66□□□□□ -0.86
CDK5RAP3-231ENST00000584063 CD300LBA8K4G0 201 aa9.66□□□□□ -0.86
CDK5RAP3-231ENST00000584063 FAM90A22PA8MWA6 464 aa9.66□□□□□ -0.86
CDK5RAP3-231ENST00000584063 FAM90A12PA8MX19 464 aa9.66□□□□□ -0.86
CDK5RAP3-231ENST00000584063 FAM90A23PA8MXZ1 464 aa9.66□□□□□ -0.86
CDK5RAP3-231ENST00000584063 J3QLI3 93 aa9.66□□□□□ -0.86
CDK5RAP3-231ENST00000584063 IGKV1D-33P01593 117 aa9.66□□□□□ -0.86
CDK5RAP3-231ENST00000584063 IGKV1-33P01594 117 aa9.66□□□□□ -0.86
CDK5RAP3-231ENST00000584063 FAM90A13PP0C7W8 464 aa9.66□□□□□ -0.86
CDK5RAP3-231ENST00000584063 FAM90A24PP0C7X0 464 aa9.66□□□□□ -0.86
CDK5RAP3-231ENST00000584063 FGF12P61328 243 aa9.66□□□□□ -0.86
CDK5RAP3-231ENST00000584063 ZNF506Q5JVG8 444 aa9.66□□□□□ -0.86
CDK5RAP3-231ENST00000584063 PRR31Q5SQ13 230 aa9.66□□□□□ -0.86
CDK5RAP3-231ENST00000584063 HIST3H2BBQ8N257 126 aa9.66□□□□□ -0.86
CDK5RAP3-231ENST00000584063 MALSU1Q96EH3 234 aa9.66□□□□□ -0.86
CDK5RAP3-231ENST00000584063 GNPNAT1Q96EK6 184 aaPredicted RBP9.66□□□□□ -0.86
CDK5RAP3-231ENST00000584063 OR4C12Q96R67 309 aa9.66□□□□□ -0.86
CDK5RAP3-231ENST00000584063 LOC102723971A0A1B0GUV8 181 aa9.65□□□□□ -0.86
CDK5RAP3-231ENST00000584063 LYZL6O75951 148 aa9.65□□□□□ -0.86
CDK5RAP3-231ENST00000584063 IGKV1-5P01602 117 aa9.65□□□□□ -0.86
CDK5RAP3-231ENST00000584063 GZMBP10144 247 aa9.65□□□□□ -0.86
CDK5RAP3-231ENST00000584063 ZNF474Q6S9Z5 364 aaPredicted RBP9.65□□□□□ -0.86
CDK5RAP3-231ENST00000584063 MRAPQ8TCY5 172 aa9.65□□□□□ -0.86
CDK5RAP3-231ENST00000584063 TMEM204Q9BSN7 226 aa9.65□□□□□ -0.86
CDK5RAP3-231ENST00000584063 ZMAT4Q9H898 229 aa9.65□□□□□ -0.86
CDK5RAP3-231ENST00000584063 IL36GQ9NZH8 169 aa9.65□□□□□ -0.86
CDK5RAP3-231ENST00000584063 KALRNO60229 2985 aa9.65□□□□□ -0.86
CDK5RAP3-231ENST00000584063 TRAV30A0A087WSZ9 112 aa9.65□□□□□ -0.86
CDK5RAP3-231ENST00000584063 G3V4G9 280 aa9.65□□□□□ -0.86
CDK5RAP3-231ENST00000584063 CLDN1O95832 211 aa9.65□□□□□ -0.86
CDK5RAP3-231ENST00000584063 RPS20P60866 119 aaKnown RBP9.65□□□□□ -0.86
CDK5RAP3-231ENST00000584063 JOSD1Q15040 202 aaPredicted RBP9.65□□□□□ -0.86
CDK5RAP3-231ENST00000584063 ZNF841Q6ZN19 808 aa9.65□□□□□ -0.86
CDK5RAP3-231ENST00000584063 MRPL41Q8IXM3 137 aaKnown RBP9.65□□□□□ -0.86
CDK5RAP3-231ENST00000584063 CLN8Q9UBY8 286 aa9.65□□□□□ -0.86
CDK5RAP3-231ENST00000584063 TRAPPC2LQ9UL33 140 aa9.65□□□□□ -0.86
CDK5RAP3-231ENST00000584063 DEFB108AA8MXU0 73 aa9.64□□□□□ -0.87
CDK5RAP3-231ENST00000584063 SYNGR2O43760 224 aa9.64□□□□□ -0.87
CDK5RAP3-231ENST00000584063 FCN3O75636 299 aa9.64□□□□□ -0.87
CDK5RAP3-231ENST00000584063 HSPB1P04792 205 aaKnown RBP9.64□□□□□ -0.87
CDK5RAP3-231ENST00000584063 SRPXP78539 464 aa9.64□□□□□ -0.87
CDK5RAP3-231ENST00000584063 WDR86Q86TI4 376 aa9.64□□□□□ -0.87
CDK5RAP3-231ENST00000584063 TMEM37Q8WXS4 190 aa9.64□□□□□ -0.87
CDK5RAP3-231ENST00000584063 ZDHHC11Q9H8X9 412 aa9.64□□□□□ -0.87
CDK5RAP3-231ENST00000584063 ELOVL5Q9NYP7 299 aa9.64□□□□□ -0.87
CDK5RAP3-231ENST00000584063 OR2W1Q9Y3N9 320 aa9.64□□□□□ -0.87
CDK5RAP3-231ENST00000584063 IGHV3-43A0A0B4J1X8 118 aa9.64□□□□□ -0.87
CDK5RAP3-231ENST00000584063 GRPP07492 148 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms