RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 MARCH11A6NNE9 402 aa12.04□□□□□ -0.48
SKA2-209ENST00000583976 IGKV1-39P01597 117 aa12.04□□□□□ -0.48
SKA2-209ENST00000583976 IGHV3-11P01762 117 aa12.04□□□□□ -0.48
SKA2-209ENST00000583976 IGKV1D-39P04432 117 aa12.04□□□□□ -0.48
SKA2-209ENST00000583976 OR5AC1P0C628 307 aa12.04□□□□□ -0.48
SKA2-209ENST00000583976 APELAP0DMC3 54 aa12.04□□□□□ -0.48
SKA2-209ENST00000583976 GP9P14770 177 aa12.04□□□□□ -0.48
SKA2-209ENST00000583976 MYOD1P15172 320 aa12.04□□□□□ -0.48
SKA2-209ENST00000583976 INSL3P51460 131 aa12.04□□□□□ -0.48
SKA2-209ENST00000583976 TRIM16LQ309B1 348 aa12.04□□□□□ -0.48
SKA2-209ENST00000583976 C10orf55Q5SWW7 151 aa12.04□□□□□ -0.48
SKA2-209ENST00000583976 UNQ5815/PRO19632Q6UWF5 114 aa12.04□□□□□ -0.48
SKA2-209ENST00000583976 MMD2Q8IY49 270 aa12.04□□□□□ -0.48
SKA2-209ENST00000583976 TMEM230Q96A57 120 aa12.04□□□□□ -0.48
SKA2-209ENST00000583976 PHB2Q99623 299 aa12.04□□□□□ -0.48
SKA2-209ENST00000583976 SLC25A21Q9BQT8 299 aaPredicted RBP12.04□□□□□ -0.48
SKA2-209ENST00000583976 C7orf50Q9BRJ6 194 aaKnown RBP12.04□□□□□ -0.48
SKA2-209ENST00000583976 MSGN1A6NI15 193 aa12.03□□□□□ -0.48
SKA2-209ENST00000583976 CRYM-AS1A6NIL9 109 aa12.03□□□□□ -0.48
SKA2-209ENST00000583976 LINC01619G3V211 115 aa12.03□□□□□ -0.48
SKA2-209ENST00000583976 UPK2O00526 184 aa12.03□□□□□ -0.48
SKA2-209ENST00000583976 LYRM1O43325 122 aa12.03□□□□□ -0.48
SKA2-209ENST00000583976 CREBL2O60519 120 aaPredicted RBP12.03□□□□□ -0.48
SKA2-209ENST00000583976 LGALS1P09382 135 aaKnown RBP12.03□□□□□ -0.48
SKA2-209ENST00000583976 TMEM267Q0VDI3 215 aaPredicted RBP12.03□□□□□ -0.48
SKA2-209ENST00000583976 RBMS2Q15434 407 aaKnown RBP12.03□□□□□ -0.48
SKA2-209ENST00000583976 POU2AF1Q16633 256 aa12.03□□□□□ -0.48
SKA2-209ENST00000583976 ZNF429Q86V71 674 aa12.03□□□□□ -0.48
SKA2-209ENST00000583976 SGPP2Q8IWX5 399 aa12.03□□□□□ -0.48
SKA2-209ENST00000583976 SRSF12Q8WXF0 261 aaKnown RBP12.03□□□□□ -0.48
SKA2-209ENST00000583976 FAM212BQ9NTI7 297 aaPredicted RBP12.03□□□□□ -0.48
SKA2-209ENST00000583976 BET1LQ9NYM9 111 aa12.03□□□□□ -0.48
SKA2-209ENST00000583976 FOXA2Q9Y261 457 aaPredicted RBP12.03□□□□□ -0.48
SKA2-209ENST00000583976 NSG2Q9Y328 171 aa12.03□□□□□ -0.48
SKA2-209ENST00000583976 NUBP2Q9Y5Y2 271 aa12.03□□□□□ -0.48
SKA2-209ENST00000583976 PLECQ15149 4684 aaKnown RBP12.02□□□□□ -0.48
SKA2-209ENST00000583976 OR9G9P0C7N8 305 aa12.02□□□□□ -0.49
SKA2-209ENST00000583976 BTCP35070 178 aa12.02□□□□□ -0.49
SKA2-209ENST00000583976 CRIP2P52943 208 aaPredicted RBP12.02□□□□□ -0.49
SKA2-209ENST00000583976 RPL8P62917 257 aaKnown RBP12.02□□□□□ -0.49
SKA2-209ENST00000583976 OR4A5Q8NH83 315 aa12.02□□□□□ -0.49
SKA2-209ENST00000583976 SEC22AQ96IW7 307 aa12.02□□□□□ -0.49
SKA2-209ENST00000583976 FYTTD1Q96QD9 318 aaKnown RBP12.02□□□□□ -0.49
SKA2-209ENST00000583976 PRR13Q9NZ81 148 aa12.02□□□□□ -0.49
SKA2-209ENST00000583976 FLVCR2Q9UPI3 526 aa12.02□□□□□ -0.49
SKA2-209ENST00000583976 KCNIP3Q9Y2W7 256 aa12.02□□□□□ -0.49
SKA2-209ENST00000583976 UPK1BO75841 260 aa12.01□□□□□ -0.49
SKA2-209ENST00000583976 NDUFB6O95139 128 aa12.01□□□□□ -0.49
SKA2-209ENST00000583976 IL6RP08887 468 aaPredicted RBP12.01□□□□□ -0.49
SKA2-209ENST00000583976 HLA-GP17693 338 aa12.01□□□□□ -0.49
SKA2-209ENST00000583976 UCP1P25874 307 aa12.01□□□□□ -0.49
SKA2-209ENST00000583976 IZUMO4Q1ZYL8 232 aa12.01□□□□□ -0.49
SKA2-209ENST00000583976 AKIRIN2Q53H80 203 aa12.01□□□□□ -0.49
SKA2-209ENST00000583976 ZFAND6Q6FIF0 208 aa12.01□□□□□ -0.49
SKA2-209ENST00000583976 ACSM6Q6P461 480 aa12.01□□□□□ -0.49
SKA2-209ENST00000583976 H2BFWTQ7Z2G1 175 aa12.01□□□□□ -0.49
SKA2-209ENST00000583976 OR5T1Q8NG75 326 aa12.01□□□□□ -0.49
SKA2-209ENST00000583976 GLYATL2Q8WU03 294 aa12.01□□□□□ -0.49
SKA2-209ENST00000583976 MS4A10Q96PG2 267 aa12.01□□□□□ -0.49
SKA2-209ENST00000583976 TMEM222Q9H0R3 208 aa12.01□□□□□ -0.49
SKA2-209ENST00000583976 HMX3A6NHT5 357 aa12□□□□□ -0.49
SKA2-209ENST00000583976 E7EUB6 86 aa12□□□□□ -0.49
SKA2-209ENST00000583976 B3GALNT1O75752 331 aa12□□□□□ -0.49
SKA2-209ENST00000583976 MAS1LP35410 378 aa12□□□□□ -0.49
SKA2-209ENST00000583976 RPL27AP46776 148 aaKnown RBP12□□□□□ -0.49
SKA2-209ENST00000583976 AKR1C2P52895 323 aa12□□□□□ -0.49
SKA2-209ENST00000583976 OR2B8PP59922 312 aa12□□□□□ -0.49
SKA2-209ENST00000583976 SUPT4H1P63272 117 aaKnown RBP12□□□□□ -0.49
SKA2-209ENST00000583976 IFITM3Q01628 133 aa12□□□□□ -0.49
SKA2-209ENST00000583976 DHODHQ02127 395 aa12□□□□□ -0.49
SKA2-209ENST00000583976 CENPSQ8N2Z9 138 aa12□□□□□ -0.49
SKA2-209ENST00000583976 LHFPL5Q8TAF8 219 aa12□□□□□ -0.49
SKA2-209ENST00000583976 ZNF355PQ9NSJ1 428 aa12□□□□□ -0.49
SKA2-209ENST00000583976 TBC1D24Q9ULP9 559 aa12□□□□□ -0.49
SKA2-209ENST00000583976 SNAPC5O75971 98 aa11.99□□□□□ -0.49
SKA2-209ENST00000583976 CDS2O95674 445 aa11.99□□□□□ -0.49
SKA2-209ENST00000583976 IGKV1-5P01602 117 aa11.99□□□□□ -0.49
SKA2-209ENST00000583976 VAMP1P23763 118 aa11.99□□□□□ -0.49
SKA2-209ENST00000583976 TPPP2P59282 170 aa11.99□□□□□ -0.49
SKA2-209ENST00000583976 DEFA5Q01523 94 aa11.99□□□□□ -0.49
SKA2-209ENST00000583976 TMEM187Q14656 261 aa11.99□□□□□ -0.49
SKA2-209ENST00000583976 TMEM128Q5BJH2 165 aa11.99□□□□□ -0.49
SKA2-209ENST00000583976 TMEM268Q5VZI3 342 aa11.99□□□□□ -0.49
SKA2-209ENST00000583976 SELENOHQ8IZQ5 122 aaKnown RBP11.99□□□□□ -0.49
SKA2-209ENST00000583976 RNASE11Q8TAA1 199 aaKnown RBP11.99□□□□□ -0.49
SKA2-209ENST00000583976 COMMD5Q9GZQ3 224 aa11.99□□□□□ -0.49
SKA2-209ENST00000583976 TNCP24821 2201 aa11.98□□□□□ -0.49
SKA2-209ENST00000583976 TEX50A0A1B0GTY4 177 aa11.98□□□□□ -0.49
SKA2-209ENST00000583976 A0A1B0GW64 132 aa11.98□□□□□ -0.49
SKA2-209ENST00000583976 RBMXL2O75526 392 aaKnown RBP11.98□□□□□ -0.49
SKA2-209ENST00000583976 ATG12O94817 140 aa11.98□□□□□ -0.49
SKA2-209ENST00000583976 IGHV4-30-4P0DP06 118 aa11.98□□□□□ -0.49
SKA2-209ENST00000583976 ANXA3P12429 323 aa11.98□□□□□ -0.49
SKA2-209ENST00000583976 LYL1P12980 280 aa11.98□□□□□ -0.49
SKA2-209ENST00000583976 SLC25A42Q86VD7 318 aa11.98□□□□□ -0.49
SKA2-209ENST00000583976 OR4A16Q8NH70 328 aa11.98□□□□□ -0.49
SKA2-209ENST00000583976 RBPMSQ93062 196 aaKnown RBP11.98□□□□□ -0.49
SKA2-209ENST00000583976 RRNAD1Q96FB5 475 aaKnown RBP11.98□□□□□ -0.49
SKA2-209ENST00000583976 GALNT14Q96FL9 552 aa11.98□□□□□ -0.49
SKA2-209ENST00000583976 TSC22D3Q99576 134 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms