RNA–Protein interactions for RNA: ENST00000583927.1

SKA2-208, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 533 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-208ENST00000583927 TAS2R19P59542 299 aa7.54□□□□□ -1.2
SKA2-208ENST00000583927 DEFA5Q01523 94 aa7.54□□□□□ -1.2
SKA2-208ENST00000583927 RNASE10Q5GAN6 216 aaKnown RBP7.54□□□□□ -1.2
SKA2-208ENST00000583927 TBC1D26Q86UD7 250 aa7.54□□□□□ -1.2
SKA2-208ENST00000583927 GPHB5Q86YW7 130 aa7.54□□□□□ -1.2
SKA2-208ENST00000583927 CLVS1Q8IUQ0 354 aaPredicted RBP7.54□□□□□ -1.2
SKA2-208ENST00000583927 GDPD1Q8N9F7 314 aa7.54□□□□□ -1.2
SKA2-208ENST00000583927 OR5B3Q8NH48 314 aa7.54□□□□□ -1.2
SKA2-208ENST00000583927 SEC22AQ96IW7 307 aa7.54□□□□□ -1.2
SKA2-208ENST00000583927 TMEM14BQ9NUH8 114 aa7.54□□□□□ -1.2
SKA2-208ENST00000583927 THYN1Q9P016 225 aa7.54□□□□□ -1.2
SKA2-208ENST00000583927 FBXL7Q9UJT9 491 aa7.54□□□□□ -1.2
SKA2-208ENST00000583927 PRNDQ9UKY0 176 aa7.54□□□□□ -1.2
SKA2-208ENST00000583927 NBEAL2Q6ZNJ1 2754 aa7.53□□□□□ -1.2
SKA2-208ENST00000583927 TEX50A0A1B0GTY4 177 aa7.53□□□□□ -1.2
SKA2-208ENST00000583927 CTDSP2O14595 271 aa7.53□□□□□ -1.2
SKA2-208ENST00000583927 RGS5O15539 181 aa7.53□□□□□ -1.2
SKA2-208ENST00000583927 B3GALNT1O75752 331 aa7.53□□□□□ -1.2
SKA2-208ENST00000583927 SNAPC5O75971 98 aa7.53□□□□□ -1.2
SKA2-208ENST00000583927 NDUFB8O95169 186 aa7.53□□□□□ -1.2
SKA2-208ENST00000583927 LY86O95711 162 aa7.53□□□□□ -1.2
SKA2-208ENST00000583927 KRASP01116 189 aa7.53□□□□□ -1.2
SKA2-208ENST00000583927 DEFA4P12838 97 aa7.53□□□□□ -1.2
SKA2-208ENST00000583927 MYOD1P15172 320 aa7.53□□□□□ -1.2
SKA2-208ENST00000583927 PHLDA2Q53GA4 152 aa7.53□□□□□ -1.2
SKA2-208ENST00000583927 LAX1Q8IWV1 398 aa7.53□□□□□ -1.2
SKA2-208ENST00000583927 Q8N402 240 aa7.53□□□□□ -1.2
SKA2-208ENST00000583927 OR1L6Q8NGR2 347 aa7.53□□□□□ -1.2
SKA2-208ENST00000583927 TERB2Q8NHR7 220 aa7.53□□□□□ -1.2
SKA2-208ENST00000583927 VN1R17PQ8TDU5 208 aa7.53□□□□□ -1.2
SKA2-208ENST00000583927 SMIM4Q8WVI0 70 aa7.53□□□□□ -1.2
SKA2-208ENST00000583927 EEF1AKMT3Q96AZ1 226 aa7.53□□□□□ -1.2
SKA2-208ENST00000583927 CCDC140Q96MF4 163 aa7.53□□□□□ -1.2
SKA2-208ENST00000583927 THAP7Q9BT49 309 aaPredicted RBP7.53□□□□□ -1.2
SKA2-208ENST00000583927 SLIRPQ9GZT3 109 aaKnown RBP7.53□□□□□ -1.2
SKA2-208ENST00000583927 NXF2Q9GZY0 626 aaKnown RBP7.53□□□□□ -1.2
SKA2-208ENST00000583927 C15orf61A6NNL5 157 aa7.52□□□□□ -1.21
SKA2-208ENST00000583927 A8MWP6 167 aa7.52□□□□□ -1.21
SKA2-208ENST00000583927 H3BMQ9 156 aa7.52□□□□□ -1.21
SKA2-208ENST00000583927 M0QYG6 137 aa7.52□□□□□ -1.21
SKA2-208ENST00000583927 IGKV1-39P01597 117 aa7.52□□□□□ -1.21
SKA2-208ENST00000583927 IGKV1D-39P04432 117 aa7.52□□□□□ -1.21
SKA2-208ENST00000583927 G6PCP35575 357 aa7.52□□□□□ -1.21
SKA2-208ENST00000583927 WT1-ASQ06250 92 aa7.52□□□□□ -1.21
SKA2-208ENST00000583927 MEF2DQ14814 521 aa7.52□□□□□ -1.21
SKA2-208ENST00000583927 LCN12Q6JVE5 192 aa7.52□□□□□ -1.21
SKA2-208ENST00000583927 STEAP1BQ6NZ63 245 aa7.52□□□□□ -1.21
SKA2-208ENST00000583927 Q8N1Y9 231 aa7.52□□□□□ -1.21
SKA2-208ENST00000583927 ZNF502Q8TBZ5 544 aa7.52□□□□□ -1.21
SKA2-208ENST00000583927 ZFAND1Q8TCF1 268 aa7.52□□□□□ -1.21
SKA2-208ENST00000583927 LSM10Q969L4 123 aaKnown RBP7.52□□□□□ -1.21
SKA2-208ENST00000583927 ISOC1Q96CN7 298 aa7.52□□□□□ -1.21
SKA2-208ENST00000583927 TMEM56Q96MV1 263 aa7.52□□□□□ -1.21
SKA2-208ENST00000583927 SOSTQ9BQB4 213 aa7.52□□□□□ -1.21
SKA2-208ENST00000583927 OR51B2Q9Y5P1 312 aa7.52□□□□□ -1.21
SKA2-208ENST00000583927 F11RQ9Y624 299 aaKnown RBP7.52□□□□□ -1.21
SKA2-208ENST00000583927 CSMD3Q7Z407 3707 aa7.52□□□□□ -1.21
SKA2-208ENST00000583927 INS-IGF2F8WCM5 200 aa7.51□□□□□ -1.21
SKA2-208ENST00000583927 GSTZ1O43708 216 aaPredicted RBP7.51□□□□□ -1.21
SKA2-208ENST00000583927 NOL3O60936 208 aaKnown RBP7.51□□□□□ -1.21
SKA2-208ENST00000583927 RAB3DO95716 219 aa7.51□□□□□ -1.21
SKA2-208ENST00000583927 REG1AP05451 166 aa7.51□□□□□ -1.21
SKA2-208ENST00000583927 P0C879 139 aa7.51□□□□□ -1.21
SKA2-208ENST00000583927 OR13C7P0DN81 318 aa7.51□□□□□ -1.21
SKA2-208ENST00000583927 ARL3P36405 182 aa7.51□□□□□ -1.21
SKA2-208ENST00000583927 PIGPP57054 158 aa7.51□□□□□ -1.21
SKA2-208ENST00000583927 SURF2Q15527 256 aaPredicted RBP7.51□□□□□ -1.21
SKA2-208ENST00000583927 FAM106AQ4KMX7 169 aa7.51□□□□□ -1.21
SKA2-208ENST00000583927 C11orf87Q6NUJ2 197 aa7.51□□□□□ -1.21
SKA2-208ENST00000583927 ADAMTSL5Q6ZMM2 481 aa7.51□□□□□ -1.21
SKA2-208ENST00000583927 C19orf35Q6ZS72 473 aa7.51□□□□□ -1.21
SKA2-208ENST00000583927 ZNF114Q8NC26 417 aa7.51□□□□□ -1.21
SKA2-208ENST00000583927 OR10W1Q8NGF6 305 aa7.51□□□□□ -1.21
SKA2-208ENST00000583927 DIRAS2Q96HU8 199 aa7.51□□□□□ -1.21
SKA2-208ENST00000583927 WWC2-AS2Q96NR7 200 aa7.51□□□□□ -1.21
SKA2-208ENST00000583927 ZC4H2Q9NQZ6 224 aa7.51□□□□□ -1.21
SKA2-208ENST00000583927 TECRQ9NZ01 308 aaKnown RBP7.51□□□□□ -1.21
SKA2-208ENST00000583927 MFSD2BA6NFX1 497 aa7.5□□□□□ -1.21
SKA2-208ENST00000583927 C2orf70A6NJV1 201 aa7.5□□□□□ -1.21
SKA2-208ENST00000583927 PPP5D1E7EU14 171 aa7.5□□□□□ -1.21
SKA2-208ENST00000583927 ATG12O94817 140 aa7.5□□□□□ -1.21
SKA2-208ENST00000583927 CLEC3BP05452 202 aa7.5□□□□□ -1.21
SKA2-208ENST00000583927 CTSDP07339 412 aaPredicted RBP7.5□□□□□ -1.21
SKA2-208ENST00000583927 AKAIN1P0CW23 69 aa7.5□□□□□ -1.21
SKA2-208ENST00000583927 PGAM2P15259 253 aa7.5□□□□□ -1.21
SKA2-208ENST00000583927 UCP1P25874 307 aa7.5□□□□□ -1.21
SKA2-208ENST00000583927 ELLP55199 621 aaPredicted RBP7.5□□□□□ -1.21
SKA2-208ENST00000583927 PRCDQ00LT1 54 aa7.5□□□□□ -1.21
SKA2-208ENST00000583927 SPSB3Q6PJ21 355 aa7.5□□□□□ -1.21
SKA2-208ENST00000583927 CLEC19AQ6UXS0 136 aa7.5□□□□□ -1.21
SKA2-208ENST00000583927 H2BFWTQ7Z2G1 175 aa7.5□□□□□ -1.21
SKA2-208ENST00000583927 CCDC71LQ8N9Z2 235 aa7.5□□□□□ -1.21
SKA2-208ENST00000583927 OR4D10Q8NGI6 311 aa7.5□□□□□ -1.21
SKA2-208ENST00000583927 OR1P1Q8NH06 330 aa7.5□□□□□ -1.21
SKA2-208ENST00000583927 OR4A16Q8NH70 328 aa7.5□□□□□ -1.21
SKA2-208ENST00000583927 MRGPRFQ96AM1 343 aa7.5□□□□□ -1.21
SKA2-208ENST00000583927 BSCL2Q96G97 398 aaPredicted RBP7.5□□□□□ -1.21
SKA2-208ENST00000583927 ZNF436Q9C0F3 470 aaPredicted RBP7.5□□□□□ -1.21
SKA2-208ENST00000583927 C19orf73Q9NVV2 129 aa7.5□□□□□ -1.21
SKA2-208ENST00000583927 SLC2A8Q9NY64 477 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms