RNA–Protein interactions for RNA: ENST00000582331.2

CCDC47-205, Transcript of coiled-coil domain containing 47, humanhuman

TSL 3

Gene CCDC47, Length 693 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-205ENST00000582331 CA11O75493 328 aa5.7□□□□□ -1.5
CCDC47-205ENST00000582331 CRTAPO75718 401 aaPredicted RBP5.7□□□□□ -1.5
CCDC47-205ENST00000582331 SAA2P0DJI9 122 aaPredicted RBP5.7□□□□□ -1.5
CCDC47-205ENST00000582331 CT45A6P0DMU7 189 aa5.7□□□□□ -1.5
CCDC47-205ENST00000582331 CT45A5P0DMU8 189 aa5.7□□□□□ -1.5
CCDC47-205ENST00000582331 CT45A7P0DMV0 189 aa5.7□□□□□ -1.5
CCDC47-205ENST00000582331 MGMTP16455 207 aa5.7□□□□□ -1.5
CCDC47-205ENST00000582331 ATF4P18848 351 aaPredicted RBP5.7□□□□□ -1.5
CCDC47-205ENST00000582331 BMI1P35226 326 aa5.7□□□□□ -1.5
CCDC47-205ENST00000582331 MRPS15P82914 257 aaKnown RBP5.7□□□□□ -1.5
CCDC47-205ENST00000582331 HTD2P86397 168 aa5.7□□□□□ -1.5
CCDC47-205ENST00000582331 FXYD3Q14802 87 aa5.7□□□□□ -1.5
CCDC47-205ENST00000582331 MEF2DQ14814 521 aa5.7□□□□□ -1.5
CCDC47-205ENST00000582331 PSG5Q15238 335 aa5.7□□□□□ -1.5
CCDC47-205ENST00000582331 SLC22A6Q4U2R8 563 aa5.7□□□□□ -1.5
CCDC47-205ENST00000582331 LY6G6FQ5SQ64 297 aa5.7□□□□□ -1.5
CCDC47-205ENST00000582331 FAM71F2Q6NXP2 309 aa5.7□□□□□ -1.5
CCDC47-205ENST00000582331 SLC16A13Q7RTY0 426 aa5.7□□□□□ -1.5
CCDC47-205ENST00000582331 GAPTQ8N292 157 aa5.7□□□□□ -1.5
CCDC47-205ENST00000582331 C9orf62Q8N4C0 152 aa5.7□□□□□ -1.5
CCDC47-205ENST00000582331 TMEM217Q8N7C4 229 aa5.7□□□□□ -1.5
CCDC47-205ENST00000582331 GVQW1Q8N7I0 195 aa5.7□□□□□ -1.5
CCDC47-205ENST00000582331 OR2AK2Q8NG84 335 aa5.7□□□□□ -1.5
CCDC47-205ENST00000582331 OR11H4Q8NGC9 324 aa5.7□□□□□ -1.5
CCDC47-205ENST00000582331 GRPEL2Q8TAA5 225 aa5.7□□□□□ -1.5
CCDC47-205ENST00000582331 PHLDA1Q8WV24 401 aaPredicted RBP5.7□□□□□ -1.5
CCDC47-205ENST00000582331 MRGPRFQ96AM1 343 aa5.7□□□□□ -1.5
CCDC47-205ENST00000582331 RAB3CQ96E17 227 aa5.7□□□□□ -1.5
CCDC47-205ENST00000582331 ARHGAP5-AS1Q96IT6 56 aa5.7□□□□□ -1.5
CCDC47-205ENST00000582331 USMG5Q96IX5 58 aa5.7□□□□□ -1.5
CCDC47-205ENST00000582331 HYLS1Q96M11 299 aa5.7□□□□□ -1.5
CCDC47-205ENST00000582331 OR2A7Q96R45 310 aa5.7□□□□□ -1.5
CCDC47-205ENST00000582331 RNF5Q99942 180 aa5.7□□□□□ -1.5
CCDC47-205ENST00000582331 SLC25A21Q9BQT8 299 aaPredicted RBP5.7□□□□□ -1.5
CCDC47-205ENST00000582331 URM1Q9BTM9 101 aaKnown RBP5.7□□□□□ -1.5
CCDC47-205ENST00000582331 PARP12Q9H0J9 701 aaKnown RBP5.7□□□□□ -1.5
CCDC47-205ENST00000582331 GPN1Q9HCN4 374 aaPredicted RBP5.7□□□□□ -1.5
CCDC47-205ENST00000582331 TP53TG1Q9Y2A0 90 aa5.7□□□□□ -1.5
CCDC47-205ENST00000582331 WASHC3Q9Y3C0 194 aa5.7□□□□□ -1.5
CCDC47-205ENST00000582331 DISC1C4P0D8 188 aa5.69□□□□□ -1.5
CCDC47-205ENST00000582331 H0YJW9 148 aa5.69□□□□□ -1.5
CCDC47-205ENST00000582331 RAB29O14966 203 aa5.69□□□□□ -1.5
CCDC47-205ENST00000582331 SPRY2O43597 315 aa5.69□□□□□ -1.5
CCDC47-205ENST00000582331 TBPP20226 339 aa5.69□□□□□ -1.5
CCDC47-205ENST00000582331 KIR2DS2P43631 304 aa5.69□□□□□ -1.5
CCDC47-205ENST00000582331 LGALS7P47929 136 aa5.69□□□□□ -1.5
CCDC47-205ENST00000582331 GNG2P59768 71 aa5.69□□□□□ -1.5
CCDC47-205ENST00000582331 DEFA5Q01523 94 aa5.69□□□□□ -1.5
CCDC47-205ENST00000582331 RNASE10Q5GAN6 216 aaKnown RBP5.69□□□□□ -1.5
CCDC47-205ENST00000582331 SIGIRRQ6IA17 410 aa5.69□□□□□ -1.5
CCDC47-205ENST00000582331 IDO2Q6ZQW0 420 aa5.69□□□□□ -1.5
CCDC47-205ENST00000582331 C5orf24Q7Z6I8 188 aa5.69□□□□□ -1.5
CCDC47-205ENST00000582331 OR52B4Q8NGK2 314 aa5.69□□□□□ -1.5
CCDC47-205ENST00000582331 ZNF431Q8TF32 576 aaPredicted RBP5.69□□□□□ -1.5
CCDC47-205ENST00000582331 GALMQ96C23 342 aa5.69□□□□□ -1.5
CCDC47-205ENST00000582331 Q96M66 194 aa5.69□□□□□ -1.5
CCDC47-205ENST00000582331 TMEM68Q96MH6 324 aa5.69□□□□□ -1.5
CCDC47-205ENST00000582331 TSNAXQ99598 290 aaKnown RBP5.69□□□□□ -1.5
CCDC47-205ENST00000582331 PECRQ9BY49 303 aa5.69□□□□□ -1.5
CCDC47-205ENST00000582331 ZNF436Q9C0F3 470 aaPredicted RBP5.69□□□□□ -1.5
CCDC47-205ENST00000582331 IFI27L2Q9H2X8 130 aa5.69□□□□□ -1.5
CCDC47-205ENST00000582331 ZC4H2Q9NQZ6 224 aa5.69□□□□□ -1.5
CCDC47-205ENST00000582331 TECRQ9NZ01 308 aaKnown RBP5.69□□□□□ -1.5
CCDC47-205ENST00000582331 MGAT4CQ9UBM8 478 aa5.69□□□□□ -1.5
CCDC47-205ENST00000582331 SCP2D1Q9UJQ7 156 aa5.69□□□□□ -1.5
CCDC47-205ENST00000582331 DNAH6Q9C0G6 4158 aa5.68□□□□□ -1.5
CCDC47-205ENST00000582331 ABCA13Q86UQ4 5058 aa5.68□□□□□ -1.5
CCDC47-205ENST00000582331 CREBL2O60519 120 aaPredicted RBP5.68□□□□□ -1.5
CCDC47-205ENST00000582331 SPDEFO95238 335 aa5.68□□□□□ -1.5
CCDC47-205ENST00000582331 RLN1P04808 185 aa5.68□□□□□ -1.5
CCDC47-205ENST00000582331 GIPP09681 153 aaPredicted RBP5.68□□□□□ -1.5
CCDC47-205ENST00000582331 FOLR2P14207 255 aa5.68□□□□□ -1.5
CCDC47-205ENST00000582331 CBX5P45973 191 aa5.68□□□□□ -1.5
CCDC47-205ENST00000582331 RPS16P62249 146 aaKnown RBP5.68□□□□□ -1.5
CCDC47-205ENST00000582331 DHODHQ02127 395 aa5.68□□□□□ -1.5
CCDC47-205ENST00000582331 RPL39P5Q59GN2 51 aa5.68□□□□□ -1.5
CCDC47-205ENST00000582331 LINC00336Q6ZUF6 198 aa5.68□□□□□ -1.5
CCDC47-205ENST00000582331 Q6ZWC4 215 aa5.68□□□□□ -1.5
CCDC47-205ENST00000582331 HOGA1Q86XE5 327 aa5.68□□□□□ -1.5
CCDC47-205ENST00000582331 OR5AN1Q8NGI8 311 aa5.68□□□□□ -1.5
CCDC47-205ENST00000582331 PRRT1Q99946 306 aa5.68□□□□□ -1.5
CCDC47-205ENST00000582331 IFT46Q9NQC8 304 aa5.68□□□□□ -1.5
CCDC47-205ENST00000582331 COA4Q9NYJ1 87 aa5.68□□□□□ -1.5
CCDC47-205ENST00000582331 PKHD1P08F94 4074 aa5.67□□□□□ -1.5
CCDC47-205ENST00000582331 UBE2QL1A1L167 161 aa5.67□□□□□ -1.5
CCDC47-205ENST00000582331 MSGN1A6NI15 193 aa5.67□□□□□ -1.5
CCDC47-205ENST00000582331 C2orf70A6NJV1 201 aa5.67□□□□□ -1.5
CCDC47-205ENST00000582331 BMPR1BO00238 502 aa5.67□□□□□ -1.5
CCDC47-205ENST00000582331 UBE2CO00762 179 aa5.67□□□□□ -1.5
CCDC47-205ENST00000582331 SIX6O95475 246 aa5.67□□□□□ -1.5
CCDC47-205ENST00000582331 PMP2P02689 132 aa5.67□□□□□ -1.5
CCDC47-205ENST00000582331 GLAP06280 429 aa5.67□□□□□ -1.5
CCDC47-205ENST00000582331 OR4E1P0C645 316 aa5.67□□□□□ -1.5
CCDC47-205ENST00000582331 GSTT2P0CG29 244 aa5.67□□□□□ -1.5
CCDC47-205ENST00000582331 ZBTB25P24278 435 aa5.67□□□□□ -1.5
CCDC47-205ENST00000582331 HRH1P35367 487 aa5.67□□□□□ -1.5
CCDC47-205ENST00000582331 APOC4P55056 127 aa5.67□□□□□ -1.5
CCDC47-205ENST00000582331 RAP2BP61225 183 aa5.67□□□□□ -1.5
CCDC47-205ENST00000582331 ARL6IP1Q15041 203 aa5.67□□□□□ -1.5
CCDC47-205ENST00000582331 ANKRD55Q3KP44 614 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms