RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 SEC14L6B5MCN3 397 aa10.36□□□□□ -0.75
CDK5RAP3-217ENST00000580287 F2RL2O00254 374 aa10.36□□□□□ -0.75
CDK5RAP3-217ENST00000580287 HIST1H1BP16401 226 aaKnown RBP10.36□□□□□ -0.75
CDK5RAP3-217ENST00000580287 ELLP55199 621 aaPredicted RBP10.36□□□□□ -0.75
CDK5RAP3-217ENST00000580287 TAS2R30P59541 319 aa10.36□□□□□ -0.75
CDK5RAP3-217ENST00000580287 IGFBPL1Q8WX77 278 aa10.36□□□□□ -0.75
CDK5RAP3-217ENST00000580287 ZDHHC16Q969W1 377 aa10.36□□□□□ -0.75
CDK5RAP3-217ENST00000580287 TIMD4Q96H15 378 aa10.36□□□□□ -0.75
CDK5RAP3-217ENST00000580287 SMDT1Q9H4I9 107 aa10.36□□□□□ -0.75
CDK5RAP3-217ENST00000580287 RPRMQ9NS64 109 aa10.36□□□□□ -0.75
CDK5RAP3-217ENST00000580287 GNG13Q9P2W3 67 aa10.36□□□□□ -0.75
CDK5RAP3-217ENST00000580287 LINC00312Q9Y6C7 94 aa10.36□□□□□ -0.75
CDK5RAP3-217ENST00000580287 UBE2L5PA0A1B0GUS4 154 aa10.36□□□□□ -0.75
CDK5RAP3-217ENST00000580287 MARCH11A6NNE9 402 aa10.36□□□□□ -0.75
CDK5RAP3-217ENST00000580287 CEBPZOSA8MTT3 80 aa10.36□□□□□ -0.75
CDK5RAP3-217ENST00000580287 OPN1MWP04001 364 aa10.36□□□□□ -0.75
CDK5RAP3-217ENST00000580287 OPN1MW2P0DN77 364 aa10.36□□□□□ -0.75
CDK5RAP3-217ENST00000580287 OPN1MW3P0DN78 364 aa10.36□□□□□ -0.75
CDK5RAP3-217ENST00000580287 EIF4EBP1Q13541 118 aaPredicted RBP10.36□□□□□ -0.75
CDK5RAP3-217ENST00000580287 PDZD11Q5EBL8 140 aa10.36□□□□□ -0.75
CDK5RAP3-217ENST00000580287 WDR25Q64LD2 544 aaPredicted RBP10.36□□□□□ -0.75
CDK5RAP3-217ENST00000580287 ZNF66Q6ZN08 573 aa10.36□□□□□ -0.75
CDK5RAP3-217ENST00000580287 HIST3H2BBQ8N257 126 aa10.36□□□□□ -0.75
CDK5RAP3-217ENST00000580287 PERPQ96FX8 193 aa10.36□□□□□ -0.75
CDK5RAP3-217ENST00000580287 ZNF714Q96N38 554 aa10.36□□□□□ -0.75
CDK5RAP3-217ENST00000580287 GPR61Q9BZJ8 451 aa10.36□□□□□ -0.75
CDK5RAP3-217ENST00000580287 JPT1Q9UK76 154 aa10.36□□□□□ -0.75
CDK5RAP3-217ENST00000580287 WNK2Q9Y3S1 2297 aa10.35□□□□□ -0.75
CDK5RAP3-217ENST00000580287 C22orf46C9J442 243 aa10.35□□□□□ -0.75
CDK5RAP3-217ENST00000580287 SRP19P09132 144 aaKnown RBP10.35□□□□□ -0.75
CDK5RAP3-217ENST00000580287 KHDC3LQ587J8 217 aa10.35□□□□□ -0.75
CDK5RAP3-217ENST00000580287 VKORC1L1Q8N0U8 176 aa10.35□□□□□ -0.75
CDK5RAP3-217ENST00000580287 C11orf42Q8N5U0 333 aa10.35□□□□□ -0.75
CDK5RAP3-217ENST00000580287 CORO2AQ92828 525 aa10.35□□□□□ -0.75
CDK5RAP3-217ENST00000580287 IDI2-AS1Q9NZ38 188 aa10.35□□□□□ -0.75
CDK5RAP3-217ENST00000580287 A0A087WWC5 75 aa10.35□□□□□ -0.75
CDK5RAP3-217ENST00000580287 DLK1P80370 383 aa10.35□□□□□ -0.75
CDK5RAP3-217ENST00000580287 MRPS11P82912 194 aaKnown RBP10.35□□□□□ -0.75
CDK5RAP3-217ENST00000580287 SLC38A11Q08AI6 406 aa10.35□□□□□ -0.75
CDK5RAP3-217ENST00000580287 GAMTQ14353 236 aa10.35□□□□□ -0.75
CDK5RAP3-217ENST00000580287 ICAM4Q14773 271 aa10.35□□□□□ -0.75
CDK5RAP3-217ENST00000580287 FAM216AQ8WUB2 273 aa10.35□□□□□ -0.75
CDK5RAP3-217ENST00000580287 R3HDM4Q96D70 268 aa10.35□□□□□ -0.75
CDK5RAP3-217ENST00000580287 HECTD1Q9ULT8 2610 aa10.35□□□□□ -0.75
CDK5RAP3-217ENST00000580287 TNCP24821 2201 aa10.34□□□□□ -0.75
CDK5RAP3-217ENST00000580287 YPEL1O60688 119 aa10.34□□□□□ -0.75
CDK5RAP3-217ENST00000580287 SCAF4O95104 1147 aaKnown RBP10.34□□□□□ -0.75
CDK5RAP3-217ENST00000580287 DUTP33316 252 aaKnown RBP10.34□□□□□ -0.75
CDK5RAP3-217ENST00000580287 ZNF726P1Q15940 193 aa10.34□□□□□ -0.75
CDK5RAP3-217ENST00000580287 OR8B3Q8NGG8 313 aa10.34□□□□□ -0.75
CDK5RAP3-217ENST00000580287 DTD1Q8TEA8 209 aa10.34□□□□□ -0.75
CDK5RAP3-217ENST00000580287 YPEL2Q96QA6 119 aa10.34□□□□□ -0.75
CDK5RAP3-217ENST00000580287 OR8B2Q96RD0 313 aa10.34□□□□□ -0.75
CDK5RAP3-217ENST00000580287 IFI27L2Q9H2X8 130 aa10.34□□□□□ -0.75
CDK5RAP3-217ENST00000580287 HSPB7Q9UBY9 170 aa10.34□□□□□ -0.75
CDK5RAP3-217ENST00000580287 ANKRD17O75179 2603 aaKnown RBP10.34□□□□□ -0.75
CDK5RAP3-217ENST00000580287 ZFHX3Q15911 3703 aa10.34□□□□□ -0.75
CDK5RAP3-217ENST00000580287 A4D1N5 150 aa10.34□□□□□ -0.75
CDK5RAP3-217ENST00000580287 FAM90A26D6RGX4 464 aa10.34□□□□□ -0.75
CDK5RAP3-217ENST00000580287 PPP1R2P9O14990 202 aa10.34□□□□□ -0.75
CDK5RAP3-217ENST00000580287 CYB5BO43169 146 aa10.34□□□□□ -0.75
CDK5RAP3-217ENST00000580287 TRGC2P03986 189 aa10.34□□□□□ -0.75
CDK5RAP3-217ENST00000580287 ZFP36P26651 326 aaKnown RBP10.34□□□□□ -0.75
CDK5RAP3-217ENST00000580287 ATP5J2P56134 94 aa10.34□□□□□ -0.75
CDK5RAP3-217ENST00000580287 MEF2CQ06413 473 aaPredicted RBP10.34□□□□□ -0.75
CDK5RAP3-217ENST00000580287 ZNF787Q6DD87 383 aa10.34□□□□□ -0.75
CDK5RAP3-217ENST00000580287 REC114Q7Z4M0 266 aa10.34□□□□□ -0.75
CDK5RAP3-217ENST00000580287 ZNF429Q86V71 674 aa10.34□□□□□ -0.75
CDK5RAP3-217ENST00000580287 LYG1Q8N1E2 194 aa10.34□□□□□ -0.75
CDK5RAP3-217ENST00000580287 NEIL1Q96FI4 390 aaPredicted RBP10.34□□□□□ -0.75
CDK5RAP3-217ENST00000580287 OR4C12Q96R67 309 aa10.34□□□□□ -0.75
CDK5RAP3-217ENST00000580287 UNKLQ9H9P5 680 aaKnown RBP10.34□□□□□ -0.75
CDK5RAP3-217ENST00000580287 RPUSD1Q9UJJ7 312 aaKnown RBP10.34□□□□□ -0.75
CDK5RAP3-217ENST00000580287 ZANQ9Y493 2812 aa10.33□□□□□ -0.76
CDK5RAP3-217ENST00000580287 GNB2P62879 340 aa10.33□□□□□ -0.76
CDK5RAP3-217ENST00000580287 PMS2P11Q13670 270 aa10.33□□□□□ -0.76
CDK5RAP3-217ENST00000580287 COTL1Q14019 142 aa10.33□□□□□ -0.76
CDK5RAP3-217ENST00000580287 TMEM155Q4W5P6 130 aa10.33□□□□□ -0.76
CDK5RAP3-217ENST00000580287 PATZ1Q9HBE1 687 aaKnown RBP10.33□□□□□ -0.76
CDK5RAP3-217ENST00000580287 LPAR2Q9HBW0 351 aa10.33□□□□□ -0.76
CDK5RAP3-217ENST00000580287 ELOA3CA0A087WX78 387 aaPredicted RBP10.33□□□□□ -0.76
CDK5RAP3-217ENST00000580287 PPIAL4CA0A0B4J2A2 164 aa10.33□□□□□ -0.76
CDK5RAP3-217ENST00000580287 PPIAL4GP0DN37 164 aa10.33□□□□□ -0.76
CDK5RAP3-217ENST00000580287 DLX6P56179 175 aa10.33□□□□□ -0.76
CDK5RAP3-217ENST00000580287 ARF6P62330 175 aa10.33□□□□□ -0.76
CDK5RAP3-217ENST00000580287 CLDND2Q8NHS1 167 aa10.33□□□□□ -0.76
CDK5RAP3-217ENST00000580287 S1PR3Q99500 378 aa10.33□□□□□ -0.76
CDK5RAP3-217ENST00000580287 QTRT1Q9BXR0 403 aaKnown RBP10.33□□□□□ -0.76
CDK5RAP3-217ENST00000580287 PRO1933Q9H354 126 aa10.33□□□□□ -0.76
CDK5RAP3-217ENST00000580287 KIAA1456Q9P272 454 aa10.33□□□□□ -0.76
CDK5RAP3-217ENST00000580287 RAB29O14966 203 aa10.32□□□□□ -0.76
CDK5RAP3-217ENST00000580287 PF4P02776 101 aa10.32□□□□□ -0.76
CDK5RAP3-217ENST00000580287 DDTP30046 118 aa10.32□□□□□ -0.76
CDK5RAP3-217ENST00000580287 REG1BP48304 166 aa10.32□□□□□ -0.76
CDK5RAP3-217ENST00000580287 RAB11AP62491 216 aa10.32□□□□□ -0.76
CDK5RAP3-217ENST00000580287 LCN2P80188 198 aa10.32□□□□□ -0.76
CDK5RAP3-217ENST00000580287 DIAPH2-AS1Q14236 149 aa10.32□□□□□ -0.76
CDK5RAP3-217ENST00000580287 TCTEX1D1Q8N7M0 179 aa10.32□□□□□ -0.76
CDK5RAP3-217ENST00000580287 TVP23CQ96ET8 276 aa10.32□□□□□ -0.76
CDK5RAP3-217ENST00000580287 GAL3ST2Q9H3Q3 398 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms