RNA–Protein interactions for RNA: ENST00000580061.5

CSNK1D-212, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-212ENST00000580061 SPCS3P61009 180 aa12.5□□□□□ -0.41
CSNK1D-212ENST00000580061 RRAS2P62070 204 aaPredicted RBP12.5□□□□□ -0.41
CSNK1D-212ENST00000580061 TMEM267Q0VDI3 215 aaPredicted RBP12.5□□□□□ -0.41
CSNK1D-212ENST00000580061 ECSCRQ19T08 205 aa12.5□□□□□ -0.41
CSNK1D-212ENST00000580061 AKIRIN2Q53H80 203 aa12.5□□□□□ -0.41
CSNK1D-212ENST00000580061 C19orf54Q5BKX5 351 aa12.5□□□□□ -0.41
CSNK1D-212ENST00000580061 OR10W1Q8NGF6 305 aa12.5□□□□□ -0.41
CSNK1D-212ENST00000580061 C2orf50Q96LR7 162 aa12.5□□□□□ -0.41
CSNK1D-212ENST00000580061 SRSF8Q9BRL6 282 aaKnown RBP12.5□□□□□ -0.41
CSNK1D-212ENST00000580061 HINT2Q9BX68 163 aa12.5□□□□□ -0.41
CSNK1D-212ENST00000580061 CACFD1Q9UGQ2 172 aa12.5□□□□□ -0.41
CSNK1D-212ENST00000580061 WSB1Q9Y6I7 421 aa12.5□□□□□ -0.41
CSNK1D-212ENST00000580061 TRAV41A0A0B4J266 112 aa12.49□□□□□ -0.41
CSNK1D-212ENST00000580061 IGLC7A0M8Q6 106 aa12.49□□□□□ -0.41
CSNK1D-212ENST00000580061 CLPSL1A2RUU4 121 aa12.49□□□□□ -0.41
CSNK1D-212ENST00000580061 FAM90A26D6RGX4 464 aa12.49□□□□□ -0.41
CSNK1D-212ENST00000580061 SIX6O95475 246 aa12.49□□□□□ -0.41
CSNK1D-212ENST00000580061 APELAP0DMC3 54 aa12.49□□□□□ -0.41
CSNK1D-212ENST00000580061 MDKP21741 143 aaPredicted RBP12.49□□□□□ -0.41
CSNK1D-212ENST00000580061 PPIFP30405 207 aaKnown RBP12.49□□□□□ -0.41
CSNK1D-212ENST00000580061 TNFRSF9Q07011 255 aa12.49□□□□□ -0.41
CSNK1D-212ENST00000580061 FCN2Q15485 313 aa12.49□□□□□ -0.41
CSNK1D-212ENST00000580061 SPINK9Q5DT21 86 aa12.49□□□□□ -0.41
CSNK1D-212ENST00000580061 CXorf66Q5JRM2 361 aaPredicted RBP12.49□□□□□ -0.41
CSNK1D-212ENST00000580061 UNQ5815/PRO19632Q6UWF5 114 aa12.49□□□□□ -0.41
CSNK1D-212ENST00000580061 OR11H7Q8NGC8 314 aa12.49□□□□□ -0.41
CSNK1D-212ENST00000580061 TMEM68Q96MH6 324 aa12.49□□□□□ -0.41
CSNK1D-212ENST00000580061 WNT10AQ9GZT5 417 aa12.49□□□□□ -0.41
CSNK1D-212ENST00000580061 GSKIPQ9P0R6 139 aa12.49□□□□□ -0.41
CSNK1D-212ENST00000580061 TMEM89A2RUT3 159 aa12.48□□□□□ -0.41
CSNK1D-212ENST00000580061 CXCL3P19876 107 aa12.48□□□□□ -0.41
CSNK1D-212ENST00000580061 H2BFSP57053 126 aa12.48□□□□□ -0.41
CSNK1D-212ENST00000580061 ID3Q02535 119 aa12.48□□□□□ -0.41
CSNK1D-212ENST00000580061 CFHR3Q02985 330 aa12.48□□□□□ -0.41
CSNK1D-212ENST00000580061 WT1-ASQ06250 92 aa12.48□□□□□ -0.41
CSNK1D-212ENST00000580061 IL15RAQ13261 267 aa12.48□□□□□ -0.41
CSNK1D-212ENST00000580061 HSD17B13Q7Z5P4 300 aaPredicted RBP12.48□□□□□ -0.41
CSNK1D-212ENST00000580061 GON7Q9BXV9 100 aa12.48□□□□□ -0.41
CSNK1D-212ENST00000580061 PLEKHA3Q9HB20 300 aa12.48□□□□□ -0.41
CSNK1D-212ENST00000580061 RNF114Q9Y508 228 aa12.48□□□□□ -0.41
CSNK1D-212ENST00000580061 A0A1B0GUS0 222 aa12.47□□□□□ -0.41
CSNK1D-212ENST00000580061 A0A1W2PN81 502 aa12.47□□□□□ -0.41
CSNK1D-212ENST00000580061 INS-IGF2F8WCM5 200 aa12.47□□□□□ -0.41
CSNK1D-212ENST00000580061 AREGP15514 252 aa12.47□□□□□ -0.41
CSNK1D-212ENST00000580061 CHRNA7P36544 502 aa12.47□□□□□ -0.41
CSNK1D-212ENST00000580061 NKX2-1P43699 371 aaPredicted RBP12.47□□□□□ -0.41
CSNK1D-212ENST00000580061 PROK1P58294 105 aa12.47□□□□□ -0.41
CSNK1D-212ENST00000580061 FOXL1Q12952 345 aa12.47□□□□□ -0.41
CSNK1D-212ENST00000580061 TTC9CQ8N5M4 171 aa12.47□□□□□ -0.41
CSNK1D-212ENST00000580061 RBKSQ9H477 322 aa12.47□□□□□ -0.41
CSNK1D-212ENST00000580061 PSMB11A5LHX3 300 aa12.46□□□□□ -0.41
CSNK1D-212ENST00000580061 NPIPB5A8MRT5 1133 aa12.46□□□□□ -0.41
CSNK1D-212ENST00000580061 CEBPZOSA8MTT3 80 aa12.46□□□□□ -0.41
CSNK1D-212ENST00000580061 SOX15O60248 233 aa12.46□□□□□ -0.41
CSNK1D-212ENST00000580061 SCGB1D2O95969 90 aa12.46□□□□□ -0.41
CSNK1D-212ENST00000580061 REG1AP05451 166 aa12.46□□□□□ -0.41
CSNK1D-212ENST00000580061 CRYGCP07315 174 aa12.46□□□□□ -0.41
CSNK1D-212ENST00000580061 OR13C7P0DN81 318 aa12.46□□□□□ -0.41
CSNK1D-212ENST00000580061 CTRB1P17538 263 aa12.46□□□□□ -0.41
CSNK1D-212ENST00000580061 PSMB6P28072 239 aa12.46□□□□□ -0.41
CSNK1D-212ENST00000580061 HOXA1P49639 335 aaPredicted RBP12.46□□□□□ -0.41
CSNK1D-212ENST00000580061 SRSF4Q08170 494 aaKnown RBP12.46□□□□□ -0.41
CSNK1D-212ENST00000580061 CTRB2Q6GPI1 263 aa12.46□□□□□ -0.41
CSNK1D-212ENST00000580061 CENPVQ7Z7K6 275 aaPredicted RBP12.46□□□□□ -0.41
CSNK1D-212ENST00000580061 MRPL41Q8IXM3 137 aaKnown RBP12.46□□□□□ -0.41
CSNK1D-212ENST00000580061 OR5T1Q8NG75 326 aa12.46□□□□□ -0.41
CSNK1D-212ENST00000580061 FAM110DQ8TAY7 271 aaPredicted RBP12.46□□□□□ -0.41
CSNK1D-212ENST00000580061 WIPF2Q8TF74 440 aaPredicted RBP12.46□□□□□ -0.41
CSNK1D-212ENST00000580061 WDR89Q96FK6 387 aaPredicted RBP12.46□□□□□ -0.41
CSNK1D-212ENST00000580061 C19orf24Q9BVV8 132 aa12.46□□□□□ -0.41
CSNK1D-212ENST00000580061 NMES1Q9C002 83 aa12.46□□□□□ -0.41
CSNK1D-212ENST00000580061 FBN1P35555 2871 aaKnown RBP12.45□□□□□ -0.42
CSNK1D-212ENST00000580061 SYNGR2O43760 224 aa12.45□□□□□ -0.42
CSNK1D-212ENST00000580061 MED6O75586 246 aa12.45□□□□□ -0.42
CSNK1D-212ENST00000580061 MBPP02686 304 aaPredicted RBP12.45□□□□□ -0.42
CSNK1D-212ENST00000580061 POLR2GP62487 172 aaKnown RBP eCLIP12.45□□□□□ -0.42
CSNK1D-212ENST00000580061 SLC35B1P78383 322 aa12.45□□□□□ -0.42
CSNK1D-212ENST00000580061 ERHP84090 104 aaKnown RBP12.45□□□□□ -0.42
CSNK1D-212ENST00000580061 CYCSP99999 105 aaKnown RBP12.45□□□□□ -0.42
CSNK1D-212ENST00000580061 C10orf99Q6UWK7 81 aa12.45□□□□□ -0.42
CSNK1D-212ENST00000580061 ZNF329Q86UD4 541 aa12.45□□□□□ -0.42
CSNK1D-212ENST00000580061 OR2C3Q8N628 320 aa12.45□□□□□ -0.42
CSNK1D-212ENST00000580061 KLHDC1Q8N7A1 406 aa12.45□□□□□ -0.42
CSNK1D-212ENST00000580061 DTD1Q8TEA8 209 aa12.45□□□□□ -0.42
CSNK1D-212ENST00000580061 MAGT1Q9H0U3 335 aa12.45□□□□□ -0.42
CSNK1D-212ENST00000580061 ENY2Q9NPA8 101 aa12.45□□□□□ -0.42
CSNK1D-212ENST00000580061 HAX1O00165 279 aa12.44□□□□□ -0.42
CSNK1D-212ENST00000580061 FBXO24O75426 580 aa12.44□□□□□ -0.42
CSNK1D-212ENST00000580061 IGLV1-40P01703 118 aa12.44□□□□□ -0.42
CSNK1D-212ENST00000580061 IGHG4P01861 327 aa12.44□□□□□ -0.42
CSNK1D-212ENST00000580061 C11orf87Q6NUJ2 197 aa12.44□□□□□ -0.42
CSNK1D-212ENST00000580061 C19orf35Q6ZS72 473 aa12.44□□□□□ -0.42
CSNK1D-212ENST00000580061 TMEM158Q8WZ71 300 aa12.44□□□□□ -0.42
CSNK1D-212ENST00000580061 ZNF436Q9C0F3 470 aaPredicted RBP12.44□□□□□ -0.42
CSNK1D-212ENST00000580061 HIPK2Q9H2X6 1198 aa12.44□□□□□ -0.42
CSNK1D-212ENST00000580061 HEYLQ9NQ87 328 aaPredicted RBP12.44□□□□□ -0.42
CSNK1D-212ENST00000580061 ATRQ13535 2644 aa12.44□□□□□ -0.42
CSNK1D-212ENST00000580061 A0A1B0GVG6 124 aa12.43□□□□□ -0.42
CSNK1D-212ENST00000580061 K7EPK0 472 aa12.43□□□□□ -0.42
CSNK1D-212ENST00000580061 WRBO00258 174 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms