RNA–Protein interactions for RNA: ENST00000579211.1

ITGB4-205, Transcript of integrin subunit beta 4, humanhuman

TSL 2

Gene ITGB4, Length 411 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-205ENST00000579211 PRRT1Q99946 306 aa13.46□□□□□ -0.25
ITGB4-205ENST00000579211 THAP7Q9BT49 309 aaPredicted RBP13.46□□□□□ -0.25
ITGB4-205ENST00000579211 MCUBQ9NWR8 336 aa13.46□□□□□ -0.25
ITGB4-205ENST00000579211 THYN1Q9P016 225 aa13.46□□□□□ -0.25
ITGB4-205ENST00000579211 SCP2D1Q9UJQ7 156 aa13.46□□□□□ -0.25
ITGB4-205ENST00000579211 TEX13DA0A0J9YY54 714 aaPredicted RBP13.45□□□□□ -0.26
ITGB4-205ENST00000579211 A0A1B0GW64 132 aa13.45□□□□□ -0.26
ITGB4-205ENST00000579211 WI2-2373I1.2A0A1W2PRP0 233 aa13.45□□□□□ -0.26
ITGB4-205ENST00000579211 H0Y980 276 aa13.45□□□□□ -0.26
ITGB4-205ENST00000579211 CRYGCP07315 174 aa13.45□□□□□ -0.26
ITGB4-205ENST00000579211 CTSDP07339 412 aaPredicted RBP13.45□□□□□ -0.26
ITGB4-205ENST00000579211 FGF2P09038 288 aa13.45□□□□□ -0.26
ITGB4-205ENST00000579211 CTRB1P17538 263 aa13.45□□□□□ -0.26
ITGB4-205ENST00000579211 FAM209BQ5JX69 171 aa13.45□□□□□ -0.26
ITGB4-205ENST00000579211 CTRB2Q6GPI1 263 aa13.45□□□□□ -0.26
ITGB4-205ENST00000579211 C19orf35Q6ZS72 473 aa13.45□□□□□ -0.26
ITGB4-205ENST00000579211 HSD17B13Q7Z5P4 300 aaPredicted RBP13.45□□□□□ -0.26
ITGB4-205ENST00000579211 OR10W1Q8NGF6 305 aa13.45□□□□□ -0.26
ITGB4-205ENST00000579211 RNASE11Q8TAA1 199 aaKnown RBP13.45□□□□□ -0.26
ITGB4-205ENST00000579211 TMEM56Q96MV1 263 aa13.45□□□□□ -0.26
ITGB4-205ENST00000579211 SRSF8Q9BRL6 282 aaKnown RBP13.45□□□□□ -0.26
ITGB4-205ENST00000579211 RBM38Q9H0Z9 239 aaKnown RBP13.45□□□□□ -0.26
ITGB4-205ENST00000579211 ANKRD20A5PA0PJZ0 165 aa13.44□□□□□ -0.26
ITGB4-205ENST00000579211 K7EIL1 84 aa13.44□□□□□ -0.26
ITGB4-205ENST00000579211 OR13C7P0DN81 318 aa13.44□□□□□ -0.26
ITGB4-205ENST00000579211 PTBP1P26599 531 aaKnown RBP eCLIP13.44□□□□□ -0.26
ITGB4-205ENST00000579211 FAUP35544 74 aaKnown RBP13.44□□□□□ -0.26
ITGB4-205ENST00000579211 AKR1C2P52895 323 aa13.44□□□□□ -0.26
ITGB4-205ENST00000579211 SPANXN2Q5MJ10 180 aa13.44□□□□□ -0.26
ITGB4-205ENST00000579211 ACSM6Q6P461 480 aa13.44□□□□□ -0.26
ITGB4-205ENST00000579211 CADM3Q8N126 398 aa13.44□□□□□ -0.26
ITGB4-205ENST00000579211 OR51S1Q8NGJ8 323 aa13.44□□□□□ -0.26
ITGB4-205ENST00000579211 OR6Q1Q8NGQ2 317 aa13.44□□□□□ -0.26
ITGB4-205ENST00000579211 LSM10Q969L4 123 aaKnown RBP13.44□□□□□ -0.26
ITGB4-205ENST00000579211 MRGPRFQ96AM1 343 aa13.44□□□□□ -0.26
ITGB4-205ENST00000579211 EEF1AKMT3Q96AZ1 226 aa13.44□□□□□ -0.26
ITGB4-205ENST00000579211 SCGB3A2Q96PL1 93 aa13.44□□□□□ -0.26
ITGB4-205ENST00000579211 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.43□□□□□ -0.26
ITGB4-205ENST00000579211 CGB1A6NKQ9 187 aa13.43□□□□□ -0.26
ITGB4-205ENST00000579211 NDUFB8O95169 186 aa13.43□□□□□ -0.26
ITGB4-205ENST00000579211 TRBV12-3P01733 135 aa13.43□□□□□ -0.26
ITGB4-205ENST00000579211 IGHV3-23P01764 117 aa13.43□□□□□ -0.26
ITGB4-205ENST00000579211 SYNJ2BPP57105 145 aa13.43□□□□□ -0.26
ITGB4-205ENST00000579211 AP3S2P59780 193 aa13.43□□□□□ -0.26
ITGB4-205ENST00000579211 DCTN2Q13561 401 aaKnown RBP13.43□□□□□ -0.26
ITGB4-205ENST00000579211 SURF2Q15527 256 aaPredicted RBP13.43□□□□□ -0.26
ITGB4-205ENST00000579211 SP6Q3SY56 376 aa13.43□□□□□ -0.26
ITGB4-205ENST00000579211 SLC25A24Q6NUK1 477 aa13.43□□□□□ -0.26
ITGB4-205ENST00000579211 Q8N402 240 aa13.43□□□□□ -0.26
ITGB4-205ENST00000579211 TOMM5Q8N4H5 51 aa13.43□□□□□ -0.26
ITGB4-205ENST00000579211 SEC22AQ96IW7 307 aa13.43□□□□□ -0.26
ITGB4-205ENST00000579211 PRR25Q96S07 402 aa13.43□□□□□ -0.26
ITGB4-205ENST00000579211 TP53RKQ96S44 253 aa13.43□□□□□ -0.26
ITGB4-205ENST00000579211 SOSTQ9BQB4 213 aa13.43□□□□□ -0.26
ITGB4-205ENST00000579211 NDUFA13Q9P0J0 144 aa13.43□□□□□ -0.26
ITGB4-205ENST00000579211 ZNF256Q9Y2P7 627 aaPredicted RBP13.43□□□□□ -0.26
ITGB4-205ENST00000579211 IGLC7A0M8Q6 106 aa13.42□□□□□ -0.26
ITGB4-205ENST00000579211 C15orf61A6NNL5 157 aa13.42□□□□□ -0.26
ITGB4-205ENST00000579211 B3GALNT1O75752 331 aa13.42□□□□□ -0.26
ITGB4-205ENST00000579211 KLF5Q13887 457 aaPredicted RBP13.42□□□□□ -0.26
ITGB4-205ENST00000579211 OR5B3Q8NH48 314 aa13.42□□□□□ -0.26
ITGB4-205ENST00000579211 RRNAD1Q96FB5 475 aaKnown RBP13.42□□□□□ -0.26
ITGB4-205ENST00000579211 CXorf58Q96LI9 332 aa13.42□□□□□ -0.26
ITGB4-205ENST00000579211 FANCD2OSQ96PS1 177 aa13.42□□□□□ -0.26
ITGB4-205ENST00000579211 PDCD10Q9BUL8 212 aa13.42□□□□□ -0.26
ITGB4-205ENST00000579211 NDUFA4L2Q9NRX3 87 aa13.42□□□□□ -0.26
ITGB4-205ENST00000579211 PEMTQ9UBM1 199 aa13.42□□□□□ -0.26
ITGB4-205ENST00000579211 S4R3C0 116 aa13.42□□□□□ -0.26
ITGB4-205ENST00000579211 DNAH3Q8TD57 4116 aa13.41□□□□□ -0.26
ITGB4-205ENST00000579211 PPP5D1E7EU14 171 aa13.41□□□□□ -0.26
ITGB4-205ENST00000579211 IGKV1-39P01597 117 aa13.41□□□□□ -0.26
ITGB4-205ENST00000579211 IGKV1D-39P04432 117 aa13.41□□□□□ -0.26
ITGB4-205ENST00000579211 ARL3P36405 182 aa13.41□□□□□ -0.26
ITGB4-205ENST00000579211 INPP1P49441 399 aa13.41□□□□□ -0.26
ITGB4-205ENST00000579211 CLEC19AQ6UXS0 136 aa13.41□□□□□ -0.26
ITGB4-205ENST00000579211 GDPD1Q8N9F7 314 aa13.41□□□□□ -0.26
ITGB4-205ENST00000579211 OR9G4Q8NGQ1 327 aa13.41□□□□□ -0.26
ITGB4-205ENST00000579211 IGLV11-55A0A075B6I3 123 aa13.4□□□□□ -0.26
ITGB4-205ENST00000579211 TRBV7-1A0A0A6YYK4 115 aa13.4□□□□□ -0.26
ITGB4-205ENST00000579211 GGCTO75223 188 aaKnown RBP13.4□□□□□ -0.26
ITGB4-205ENST00000579211 WT1-ASQ06250 92 aa13.4□□□□□ -0.26
ITGB4-205ENST00000579211 SGPP2Q8IWX5 399 aa13.4□□□□□ -0.26
ITGB4-205ENST00000579211 OR1L6Q8NGR2 347 aa13.4□□□□□ -0.26
ITGB4-205ENST00000579211 RTBDNQ9BSG5 229 aaPredicted RBP13.4□□□□□ -0.26
ITGB4-205ENST00000579211 NAA60Q9H7X0 242 aa13.4□□□□□ -0.26
ITGB4-205ENST00000579211 TMEM14BQ9NUH8 114 aa13.4□□□□□ -0.26
ITGB4-205ENST00000579211 GPR132Q9UNW8 380 aa13.4□□□□□ -0.26
ITGB4-205ENST00000579211 KCNIP3Q9Y2W7 256 aa13.4□□□□□ -0.26
ITGB4-205ENST00000579211 BMPR1BO00238 502 aa13.39□□□□□ -0.27
ITGB4-205ENST00000579211 OR5AC1P0C628 307 aa13.39□□□□□ -0.27
ITGB4-205ENST00000579211 ERHP84090 104 aaKnown RBP13.39□□□□□ -0.27
ITGB4-205ENST00000579211 DHODHQ02127 395 aa13.39□□□□□ -0.27
ITGB4-205ENST00000579211 ZNF57Q68EA5 555 aaPredicted RBP13.39□□□□□ -0.27
ITGB4-205ENST00000579211 C5orf66Q9H5L9 145 aa13.39□□□□□ -0.27
ITGB4-205ENST00000579211 SLC2A8Q9NY64 477 aa13.39□□□□□ -0.27
ITGB4-205ENST00000579211 V9GYH0 126 aa13.39□□□□□ -0.27
ITGB4-205ENST00000579211 PRKDCP78527 4128 aaKnown RBP13.39□□□□□ -0.27
ITGB4-205ENST00000579211 DBX1A6NMT0 343 aa13.38□□□□□ -0.27
ITGB4-205ENST00000579211 OR2C1O95371 312 aa13.38□□□□□ -0.27
ITGB4-205ENST00000579211 IFNA17P01571 189 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms