RNA–Protein interactions for RNA: ENST00000579081.5

NF1-219, Transcript of neurofibromin 1, humanhuman

TSL 1 (best)

Gene NF1, Length 8,788 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-219ENST00000579081 SEMA5BQ9P283 1151 aa4.39□□□□□ -1.71
NF1-219ENST00000579081 PEMTQ9UBM1 199 aa4.39□□□□□ -1.71
NF1-219ENST00000579081 A0A1W2PRX2 142 aa4.39□□□□□ -1.71
NF1-219ENST00000579081 A1L4Q6 167 aa4.39□□□□□ -1.71
NF1-219ENST00000579081 NPIPB7O75200 414 aa4.39□□□□□ -1.71
NF1-219ENST00000579081 RAE1P78406 368 aaKnown RBP4.39□□□□□ -1.71
NF1-219ENST00000579081 STPG1Q5TH74 334 aa4.39□□□□□ -1.71
NF1-219ENST00000579081 R3HDMLQ9H3Y0 253 aa4.39□□□□□ -1.71
NF1-219ENST00000579081 DNAJC4Q9NNZ3 241 aa4.39□□□□□ -1.71
NF1-219ENST00000579081 TRAV8-6A0A0B4J262 113 aa4.39□□□□□ -1.71
NF1-219ENST00000579081 PGPEP1LA6NFU8 196 aa4.39□□□□□ -1.71
NF1-219ENST00000579081 CRYBB2P43320 205 aa4.39□□□□□ -1.71
NF1-219ENST00000579081 HBBP68871 147 aa4.39□□□□□ -1.71
NF1-219ENST00000579081 ZXDCQ2QGD7 858 aaPredicted RBP4.39□□□□□ -1.71
NF1-219ENST00000579081 FAM214BQ7L5A3 538 aa4.39□□□□□ -1.71
NF1-219ENST00000579081 ZNF645Q8N7E2 425 aa4.39□□□□□ -1.71
NF1-219ENST00000579081 JMJD8Q96S16 334 aa4.39□□□□□ -1.71
NF1-219ENST00000579081 AICDAQ9GZX7 198 aa4.39□□□□□ -1.71
NF1-219ENST00000579081 GFRA4Q9GZZ7 299 aa4.39□□□□□ -1.71
NF1-219ENST00000579081 TMEFF2Q9UIK5 374 aaPredicted RBP4.39□□□□□ -1.71
NF1-219ENST00000579081 NKX2-8O15522 239 aa4.39□□□□□ -1.71
NF1-219ENST00000579081 ATG4DQ86TL0 474 aaPredicted RBP4.39□□□□□ -1.71
NF1-219ENST00000579081 DTX2Q86UW9 622 aa4.39□□□□□ -1.71
NF1-219ENST00000579081 GPR146Q96CH1 333 aa4.39□□□□□ -1.71
NF1-219ENST00000579081 PLSCR2Q9NRY7 297 aa4.39□□□□□ -1.71
NF1-219ENST00000579081 ARID2Q68CP9 1835 aa4.39□□□□□ -1.71
NF1-219ENST00000579081 UNC13CQ8NB66 2214 aa4.39□□□□□ -1.71
NF1-219ENST00000579081 DOCK11Q5JSL3 2073 aa4.39□□□□□ -1.71
NF1-219ENST00000579081 TCRBV5S1A1TA0A578 114 aa4.39□□□□□ -1.71
NF1-219ENST00000579081 F8W1H4 67 aa4.39□□□□□ -1.71
NF1-219ENST00000579081 Q6ZVH6 145 aa4.39□□□□□ -1.71
NF1-219ENST00000579081 CACNG8Q8WXS5 425 aa4.39□□□□□ -1.71
NF1-219ENST00000579081 APC2O95996 2303 aa4.39□□□□□ -1.71
NF1-219ENST00000579081 NTN1O95631 604 aa4.39□□□□□ -1.71
NF1-219ENST00000579081 EGR1P18146 543 aa4.39□□□□□ -1.71
NF1-219ENST00000579081 C1orf100Q5SVJ3 147 aa4.39□□□□□ -1.71
NF1-219ENST00000579081 MIC13Q5XKP0 118 aa4.39□□□□□ -1.71
NF1-219ENST00000579081 DMKNQ6E0U4 476 aaPredicted RBP4.39□□□□□ -1.71
NF1-219ENST00000579081 HOGA1Q86XE5 327 aa4.39□□□□□ -1.71
NF1-219ENST00000579081 OR5AN1Q8NGI8 311 aa4.39□□□□□ -1.71
NF1-219ENST00000579081 OR51G1Q8NGK1 321 aa4.39□□□□□ -1.71
NF1-219ENST00000579081 GTSF1LQ9H1H1 148 aa4.39□□□□□ -1.71
NF1-219ENST00000579081 SLC25A15Q9Y619 301 aa4.39□□□□□ -1.71
NF1-219ENST00000579081 A0A1B0GWB2 263 aa4.39□□□□□ -1.71
NF1-219ENST00000579081 PRR33A8MZF0 331 aa4.39□□□□□ -1.71
NF1-219ENST00000579081 H3BTX0 84 aa4.39□□□□□ -1.71
NF1-219ENST00000579081 SAA1P0DJI8 122 aaPredicted RBP4.39□□□□□ -1.71
NF1-219ENST00000579081 ZNF48Q96MX3 618 aaPredicted RBP4.39□□□□□ -1.71
NF1-219ENST00000579081 SCGB3A1Q96QR1 104 aa4.39□□□□□ -1.71
NF1-219ENST00000579081 RPP25Q9BUL9 199 aaKnown RBP4.39□□□□□ -1.71
NF1-219ENST00000579081 CLEC7AQ9BXN2 247 aa4.39□□□□□ -1.71
NF1-219ENST00000579081 FRRS1LQ9P0K9 344 aa4.39□□□□□ -1.71
NF1-219ENST00000579081 ST6GALNAC2Q9UJ37 374 aa4.39□□□□□ -1.71
NF1-219ENST00000579081 IGHV5-10-1A0A0J9YXX1 117 aa4.38□□□□□ -1.71
NF1-219ENST00000579081 FXYD1O00168 92 aa4.38□□□□□ -1.71
NF1-219ENST00000579081 SYNGR3O43761 229 aa4.38□□□□□ -1.71
NF1-219ENST00000579081 HSPE1P61604 102 aaKnown RBP4.38□□□□□ -1.71
NF1-219ENST00000579081 CEACAM21Q3KPI0 293 aa4.38□□□□□ -1.71
NF1-219ENST00000579081 BCL6BQ8N143 479 aaPredicted RBP4.38□□□□□ -1.71
NF1-219ENST00000579081 TMEM186Q96B77 213 aa4.38□□□□□ -1.71
NF1-219ENST00000579081 TRAV24A0A0B4J272 114 aa4.38□□□□□ -1.71
NF1-219ENST00000579081 CEACAM1P13688 526 aa4.38□□□□□ -1.71
NF1-219ENST00000579081 TFF2Q03403 129 aa4.38□□□□□ -1.71
NF1-219ENST00000579081 C1QL3Q5VWW1 255 aa4.38□□□□□ -1.71
NF1-219ENST00000579081 ZFAND6Q6FIF0 208 aa4.38□□□□□ -1.71
NF1-219ENST00000579081 PUSL1Q8N0Z8 303 aaKnown RBP4.38□□□□□ -1.71
NF1-219ENST00000579081 ITGB4P16144 1822 aa4.38□□□□□ -1.71
NF1-219ENST00000579081 A0A0G2JLM5 398 aa4.38□□□□□ -1.71
NF1-219ENST00000579081 M0R381 172 aa4.38□□□□□ -1.71
NF1-219ENST00000579081 IGLV3-25P01717 112 aa4.38□□□□□ -1.71
NF1-219ENST00000579081 BGLAPP02818 100 aa4.38□□□□□ -1.71
NF1-219ENST00000579081 PGFP49763 221 aa4.38□□□□□ -1.71
NF1-219ENST00000579081 TMEM42Q69YG0 159 aa4.38□□□□□ -1.71
NF1-219ENST00000579081 STHQ8IWL8 128 aa4.38□□□□□ -1.71
NF1-219ENST00000579081 CIARTQ8N365 385 aaPredicted RBP4.38□□□□□ -1.71
NF1-219ENST00000579081 OR2K2Q8NGT1 345 aa4.38□□□□□ -1.71
NF1-219ENST00000579081 VSIG8P0DPA2 414 aa4.38□□□□□ -1.71
NF1-219ENST00000579081 PDE6GP18545 87 aa4.38□□□□□ -1.71
NF1-219ENST00000579081 ZIC1Q15915 447 aa4.38□□□□□ -1.71
NF1-219ENST00000579081 GOLT1AQ6ZVE7 132 aa4.38□□□□□ -1.71
NF1-219ENST00000579081 LINC01555Q8NAE3 123 aa4.38□□□□□ -1.71
NF1-219ENST00000579081 FAM60AQ9NP50 221 aa4.38□□□□□ -1.71
NF1-219ENST00000579081 TNFRSF12AQ9NP84 129 aa4.38□□□□□ -1.71
NF1-219ENST00000579081 CEP290O15078 2479 aa4.38□□□□□ -1.71
NF1-219ENST00000579081 GFRA3O60609 400 aa4.38□□□□□ -1.71
NF1-219ENST00000579081 EIF3GO75821 320 aaKnown RBP eCLIP4.38□□□□□ -1.71
NF1-219ENST00000579081 RUNX1Q01196 453 aa4.38□□□□□ -1.71
NF1-219ENST00000579081 CD300CQ08708 224 aa4.38□□□□□ -1.71
NF1-219ENST00000579081 COA6Q5JTJ3 125 aaKnown RBP4.38□□□□□ -1.71
NF1-219ENST00000579081 SPSB4Q96A44 273 aa4.38□□□□□ -1.71
NF1-219ENST00000579081 PPP1R3EQ9H7J1 279 aa4.38□□□□□ -1.71
NF1-219ENST00000579081 IGHV3OR16-13A0A075B7E8 117 aa4.38□□□□□ -1.71
NF1-219ENST00000579081 IGHV3-74A0A0B4J1X5 117 aa4.38□□□□□ -1.71
NF1-219ENST00000579081 IGHV3-35A0A0C4DH35 117 aa4.38□□□□□ -1.71
NF1-219ENST00000579081 A0A1W2PP11 408 aa4.38□□□□□ -1.71
NF1-219ENST00000579081 IQCF6A8MYZ5 107 aa4.38□□□□□ -1.71
NF1-219ENST00000579081 PATE3B3GLJ2 98 aa4.38□□□□□ -1.71
NF1-219ENST00000579081 F8WEM9 126 aa4.38□□□□□ -1.71
NF1-219ENST00000579081 SRIP30626 198 aa4.38□□□□□ -1.71
NF1-219ENST00000579081 TSPAN7P41732 249 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms