RNA–Protein interactions for RNA: ENST00000578516.1

CDC42EP4-203, Transcript of CDC42 effector protein 4, humanhuman

TSL 4

Gene CDC42EP4, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-203ENST00000578516 TMEM14BQ9NUH8 114 aa16.78■□□□□ 0.28
CDC42EP4-203ENST00000578516 NOTCH3Q9UM47 2321 aa16.78■□□□□ 0.28
CDC42EP4-203ENST00000578516 NBEAL1Q6ZS30 2694 aa16.77■□□□□ 0.28
CDC42EP4-203ENST00000578516 A0A0B4J293 547 aa16.77■□□□□ 0.28
CDC42EP4-203ENST00000578516 ANKRD34BA5PLL1 514 aa16.77■□□□□ 0.28
CDC42EP4-203ENST00000578516 NPIPB5A8MRT5 1133 aa16.77■□□□□ 0.28
CDC42EP4-203ENST00000578516 H3BUA1 57 aa16.77■□□□□ 0.28
CDC42EP4-203ENST00000578516 CDS2O95674 445 aa16.77■□□□□ 0.28
CDC42EP4-203ENST00000578516 TRAPPC2P0DI81 140 aa16.77■□□□□ 0.28
CDC42EP4-203ENST00000578516 TRAPPC2BP0DI82 140 aa16.77■□□□□ 0.28
CDC42EP4-203ENST00000578516 IGLL1P15814 213 aa16.77■□□□□ 0.28
CDC42EP4-203ENST00000578516 CTRB1P17538 263 aa16.77■□□□□ 0.28
CDC42EP4-203ENST00000578516 SLURP1P55000 103 aa16.77■□□□□ 0.28
CDC42EP4-203ENST00000578516 PPP1R1AQ13522 171 aa16.77■□□□□ 0.28
CDC42EP4-203ENST00000578516 RBMS2Q15434 407 aaKnown RBP16.77■□□□□ 0.28
CDC42EP4-203ENST00000578516 CTRB2Q6GPI1 263 aa16.77■□□□□ 0.28
CDC42EP4-203ENST00000578516 C11orf87Q6NUJ2 197 aa16.77■□□□□ 0.28
CDC42EP4-203ENST00000578516 SLC35G3Q8N808 338 aa16.77■□□□□ 0.28
CDC42EP4-203ENST00000578516 OR4A16Q8NH70 328 aa16.77■□□□□ 0.28
CDC42EP4-203ENST00000578516 DEDD2Q8WXF8 326 aa16.77■□□□□ 0.28
CDC42EP4-203ENST00000578516 S100ZQ8WXG8 99 aa16.77■□□□□ 0.28
CDC42EP4-203ENST00000578516 SCGB3A2Q96PL1 93 aa16.77■□□□□ 0.28
CDC42EP4-203ENST00000578516 FANCD2OSQ96PS1 177 aa16.77■□□□□ 0.28
CDC42EP4-203ENST00000578516 CCDC32Q9BV29 185 aa16.77■□□□□ 0.28
CDC42EP4-203ENST00000578516 SLA2Q9H6Q3 261 aa16.77■□□□□ 0.28
CDC42EP4-203ENST00000578516 NDUFA4L2Q9NRX3 87 aa16.77■□□□□ 0.28
CDC42EP4-203ENST00000578516 PRNDQ9UKY0 176 aa16.77■□□□□ 0.28
CDC42EP4-203ENST00000578516 TBC1D24Q9ULP9 559 aa16.77■□□□□ 0.28
CDC42EP4-203ENST00000578516 NAP1L6A6NFF2 107 aa16.76■□□□□ 0.27
CDC42EP4-203ENST00000578516 LYRM1O43325 122 aa16.76■□□□□ 0.27
CDC42EP4-203ENST00000578516 NXPH3O95157 252 aa16.76■□□□□ 0.27
CDC42EP4-203ENST00000578516 IGHV3-23P01764 117 aa16.76■□□□□ 0.27
CDC42EP4-203ENST00000578516 CD33P20138 364 aa16.76■□□□□ 0.27
CDC42EP4-203ENST00000578516 VAMP1P23763 118 aa16.76■□□□□ 0.27
CDC42EP4-203ENST00000578516 MYCNOSP40205 109 aa16.76■□□□□ 0.27
CDC42EP4-203ENST00000578516 IFITM3Q01628 133 aa16.76■□□□□ 0.27
CDC42EP4-203ENST00000578516 FHL3Q13643 280 aa16.76■□□□□ 0.27
CDC42EP4-203ENST00000578516 OXLD1Q5BKU9 147 aa16.76■□□□□ 0.27
CDC42EP4-203ENST00000578516 LINC00299Q6ZSB3 139 aa16.76■□□□□ 0.27
CDC42EP4-203ENST00000578516 CENPSQ8N2Z9 138 aa16.76■□□□□ 0.27
CDC42EP4-203ENST00000578516 RBPMSQ93062 196 aaKnown RBP16.76■□□□□ 0.27
CDC42EP4-203ENST00000578516 GPR146Q96CH1 333 aa16.76■□□□□ 0.27
CDC42EP4-203ENST00000578516 GALNT14Q96FL9 552 aa16.76■□□□□ 0.27
CDC42EP4-203ENST00000578516 SLC25A21Q9BQT8 299 aaPredicted RBP16.76■□□□□ 0.27
CDC42EP4-203ENST00000578516 ZNF257Q9Y2Q1 563 aa16.76■□□□□ 0.27
CDC42EP4-203ENST00000578516 ST8SIA3O43173 380 aa16.75■□□□□ 0.27
CDC42EP4-203ENST00000578516 NDUFB8O95169 186 aa16.75■□□□□ 0.27
CDC42EP4-203ENST00000578516 OR13C7P0DN81 318 aa16.75■□□□□ 0.27
CDC42EP4-203ENST00000578516 ANXA7P20073 488 aaKnown RBP16.75■□□□□ 0.27
CDC42EP4-203ENST00000578516 MFAP2P55001 183 aa16.75■□□□□ 0.27
CDC42EP4-203ENST00000578516 DHODHQ02127 395 aa16.75■□□□□ 0.27
CDC42EP4-203ENST00000578516 ZNF846Q147U1 533 aa16.75■□□□□ 0.27
CDC42EP4-203ENST00000578516 ANKRD55Q3KP44 614 aa16.75■□□□□ 0.27
CDC42EP4-203ENST00000578516 OR1N2Q8NGR9 330 aa16.75■□□□□ 0.27
CDC42EP4-203ENST00000578516 TRBV9A0A0B4J1U6 114 aa16.74■□□□□ 0.27
CDC42EP4-203ENST00000578516 C13orf42A0A1B0GVH6 325 aa16.74■□□□□ 0.27
CDC42EP4-203ENST00000578516 CRYGCP07315 174 aa16.74■□□□□ 0.27
CDC42EP4-203ENST00000578516 MECP2P51608 486 aaKnown RBP16.74■□□□□ 0.27
CDC42EP4-203ENST00000578516 RUNX1Q01196 453 aa16.74■□□□□ 0.27
CDC42EP4-203ENST00000578516 EXOSC2Q13868 293 aaKnown RBP16.74■□□□□ 0.27
CDC42EP4-203ENST00000578516 LYZL2Q7Z4W2 148 aa16.74■□□□□ 0.27
CDC42EP4-203ENST00000578516 CADM3Q8N126 398 aa16.74■□□□□ 0.27
CDC42EP4-203ENST00000578516 TMEM56Q96MV1 263 aa16.74■□□□□ 0.27
CDC42EP4-203ENST00000578516 TSC22D3Q99576 134 aa16.74■□□□□ 0.27
CDC42EP4-203ENST00000578516 C7orf50Q9BRJ6 194 aaKnown RBP16.74■□□□□ 0.27
CDC42EP4-203ENST00000578516 WDR12Q9GZL7 423 aaKnown RBP16.74■□□□□ 0.27
CDC42EP4-203ENST00000578516 FBXL7Q9UJT9 491 aa16.74■□□□□ 0.27
CDC42EP4-203ENST00000578516 TMEM56-RWDD3S4R434 201 aa16.74■□□□□ 0.27
CDC42EP4-203ENST00000578516 FBN3Q75N90 2809 aa16.73■□□□□ 0.27
CDC42EP4-203ENST00000578516 B3GALNT1O75752 331 aa16.73■□□□□ 0.27
CDC42EP4-203ENST00000578516 ZNF616Q08AN1 781 aa16.73■□□□□ 0.27
CDC42EP4-203ENST00000578516 SLC25A42Q86VD7 318 aa16.73■□□□□ 0.27
CDC42EP4-203ENST00000578516 LSM10Q969L4 123 aaKnown RBP16.73■□□□□ 0.27
CDC42EP4-203ENST00000578516 RRNAD1Q96FB5 475 aaKnown RBP16.73■□□□□ 0.27
CDC42EP4-203ENST00000578516 CACNG5Q9UF02 275 aa16.73■□□□□ 0.27
CDC42EP4-203ENST00000578516 IGLV11-55A0A075B6I3 123 aa16.72■□□□□ 0.27
CDC42EP4-203ENST00000578516 IGHV3-21A0A0B4J1V1 117 aa16.72■□□□□ 0.27
CDC42EP4-203ENST00000578516 MFSD2BA6NFX1 497 aa16.72■□□□□ 0.27
CDC42EP4-203ENST00000578516 CENPXA8MT69 81 aa16.72■□□□□ 0.27
CDC42EP4-203ENST00000578516 UPK1BO75841 260 aa16.72■□□□□ 0.27
CDC42EP4-203ENST00000578516 SFT2D2O95562 160 aa16.72■□□□□ 0.27
CDC42EP4-203ENST00000578516 FGF2P09038 288 aa16.72■□□□□ 0.27
CDC42EP4-203ENST00000578516 SLC6A1P30531 599 aa16.72■□□□□ 0.27
CDC42EP4-203ENST00000578516 PRCDQ00LT1 54 aa16.72■□□□□ 0.27
CDC42EP4-203ENST00000578516 TMEM128Q5BJH2 165 aa16.72■□□□□ 0.27
CDC42EP4-203ENST00000578516 OR5B3Q8NH48 314 aa16.72■□□□□ 0.27
CDC42EP4-203ENST00000578516 KCNIP3Q9Y2W7 256 aa16.72■□□□□ 0.27
CDC42EP4-203ENST00000578516 BRI3O95415 125 aa16.71■□□□□ 0.27
CDC42EP4-203ENST00000578516 HSPE1P61604 102 aaKnown RBP16.71■□□□□ 0.27
CDC42EP4-203ENST00000578516 C15orf32Q32M92 178 aa16.71■□□□□ 0.27
CDC42EP4-203ENST00000578516 SAMD5Q5TGI4 173 aa16.71■□□□□ 0.27
CDC42EP4-203ENST00000578516 WFDC9Q8NEX5 89 aa16.71■□□□□ 0.27
CDC42EP4-203ENST00000578516 DCUN1D4Q92564 292 aa16.71■□□□□ 0.27
CDC42EP4-203ENST00000578516 DPF1Q92782 380 aa16.71■□□□□ 0.27
CDC42EP4-203ENST00000578516 C20orf85Q9H1P6 137 aa16.71■□□□□ 0.27
CDC42EP4-203ENST00000578516 TRAV6A0A075B6T7 132 aa16.7■□□□□ 0.26
CDC42EP4-203ENST00000578516 FAM223BA6NKX1 122 aa16.7■□□□□ 0.26
CDC42EP4-203ENST00000578516 LINC01619G3V211 115 aa16.7■□□□□ 0.26
CDC42EP4-203ENST00000578516 DEFA4P12838 97 aa16.7■□□□□ 0.26
CDC42EP4-203ENST00000578516 ATP5G2Q06055 141 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms