RNA–Protein interactions for RNA: ENST00000578373.5

ERBB2-206, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 4,523 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-206ENST00000578373 TMEM183AQ8IXX5 376 aa10.12□□□□□ -0.79
ERBB2-206ENST00000578373 IL6RP08887 468 aaPredicted RBP10.12□□□□□ -0.79
ERBB2-206ENST00000578373 SPATA45Q537H7 98 aa10.12□□□□□ -0.79
ERBB2-206ENST00000578373 C17orf82Q86X59 251 aaPredicted RBP10.12□□□□□ -0.79
ERBB2-206ENST00000578373 TMEM191AQ9H0A3 160 aa10.12□□□□□ -0.79
ERBB2-206ENST00000578373 GSX1Q9H4S2 264 aaPredicted RBP10.12□□□□□ -0.79
ERBB2-206ENST00000578373 RELBQ01201 579 aa10.12□□□□□ -0.79
ERBB2-206ENST00000578373 ECSCRQ19T08 205 aa10.12□□□□□ -0.79
ERBB2-206ENST00000578373 LINC00470Q9BZP3 86 aa10.12□□□□□ -0.79
ERBB2-206ENST00000578373 DNAJC4Q9NNZ3 241 aa10.12□□□□□ -0.79
ERBB2-206ENST00000578373 RALYQ9UKM9 306 aaKnown RBP10.12□□□□□ -0.79
ERBB2-206ENST00000578373 A0A0G2JRQ6 117 aa10.12□□□□□ -0.79
ERBB2-206ENST00000578373 GCGP01275 180 aa10.12□□□□□ -0.79
ERBB2-206ENST00000578373 MPZP25189 248 aa10.12□□□□□ -0.79
ERBB2-206ENST00000578373 GGNQ86UU5 652 aa10.12□□□□□ -0.79
ERBB2-206ENST00000578373 DYSFO75923 2080 aa10.11□□□□□ -0.79
ERBB2-206ENST00000578373 LOC102723996A0A087X1L8 192 aa10.11□□□□□ -0.79
ERBB2-206ENST00000578373 PSPNO60542 156 aa10.11□□□□□ -0.79
ERBB2-206ENST00000578373 C8orf88P0DMB2 117 aa10.11□□□□□ -0.79
ERBB2-206ENST00000578373 PCSK4Q6UW60 755 aa10.11□□□□□ -0.79
ERBB2-206ENST00000578373 SPSB4Q96A44 273 aa10.11□□□□□ -0.79
ERBB2-206ENST00000578373 C14orf144Q96I85 54 aa10.11□□□□□ -0.79
ERBB2-206ENST00000578373 TEX50A0A1B0GTY4 177 aa10.11□□□□□ -0.79
ERBB2-206ENST00000578373 M0QZ24 198 aa10.11□□□□□ -0.79
ERBB2-206ENST00000578373 CTAG1AP78358 180 aa10.11□□□□□ -0.79
ERBB2-206ENST00000578373 GTF2H5Q6ZYL4 71 aa10.11□□□□□ -0.79
ERBB2-206ENST00000578373 ERASQ7Z444 233 aa10.11□□□□□ -0.79
ERBB2-206ENST00000578373 IGLV3-32A0A0A0MS00 114 aa10.11□□□□□ -0.79
ERBB2-206ENST00000578373 UQCRFS1P47985 274 aa10.11□□□□□ -0.79
ERBB2-206ENST00000578373 RPL24P83731 157 aaKnown RBP10.11□□□□□ -0.79
ERBB2-206ENST00000578373 MST1LQ2TV78 715 aa10.11□□□□□ -0.79
ERBB2-206ENST00000578373 SLC35E4Q6ICL7 350 aa10.11□□□□□ -0.79
ERBB2-206ENST00000578373 HEPN1Q6WQI6 88 aa10.11□□□□□ -0.79
ERBB2-206ENST00000578373 MIR17HGQ75NE6 70 aa10.11□□□□□ -0.79
ERBB2-206ENST00000578373 PRR7Q8TB68 274 aa10.11□□□□□ -0.79
ERBB2-206ENST00000578373 ST6GALNAC6Q969X2 333 aa10.11□□□□□ -0.79
ERBB2-206ENST00000578373 HTN1P15515 57 aa10.1□□□□□ -0.79
ERBB2-206ENST00000578373 ARF6P62330 175 aa10.1□□□□□ -0.79
ERBB2-206ENST00000578373 TMEM177Q53S58 311 aa10.1□□□□□ -0.79
ERBB2-206ENST00000578373 Q6ZRM9 215 aa10.1□□□□□ -0.79
ERBB2-206ENST00000578373 LIME1Q9H400 295 aa10.1□□□□□ -0.79
ERBB2-206ENST00000578373 WIPF3A6NGB9 483 aa10.1□□□□□ -0.79
ERBB2-206ENST00000578373 C5orf52A6NGY3 159 aa10.1□□□□□ -0.79
ERBB2-206ENST00000578373 ISLRO14498 428 aa10.1□□□□□ -0.79
ERBB2-206ENST00000578373 C20orf204Q6ZNR8 217 aa10.1□□□□□ -0.79
ERBB2-206ENST00000578373 RPP25LQ8N5L8 163 aaKnown RBP10.1□□□□□ -0.79
ERBB2-206ENST00000578373 CCL3L1P16619 93 aa10.1□□□□□ -0.79
ERBB2-206ENST00000578373 BMPERQ8N8U9 685 aa10.1□□□□□ -0.79
ERBB2-206ENST00000578373 C9orf106Q8NAJ2 232 aa10.1□□□□□ -0.79
ERBB2-206ENST00000578373 OR8B3Q8NGG8 313 aa10.1□□□□□ -0.79
ERBB2-206ENST00000578373 TMEM45BQ96B21 275 aa10.1□□□□□ -0.79
ERBB2-206ENST00000578373 OR8B2Q96RD0 313 aa10.1□□□□□ -0.79
ERBB2-206ENST00000578373 RNASE7Q9H1E1 156 aaKnown RBP10.1□□□□□ -0.79
ERBB2-206ENST00000578373 ANKHD1Q8IWZ3 2542 aaKnown RBP10.1□□□□□ -0.79
ERBB2-206ENST00000578373 SNAI2O43623 268 aa10.1□□□□□ -0.79
ERBB2-206ENST00000578373 GPR6P46095 362 aaPredicted RBP10.1□□□□□ -0.79
ERBB2-206ENST00000578373 LGALS7P47929 136 aa10.1□□□□□ -0.79
ERBB2-206ENST00000578373 RPL30P62888 115 aaKnown RBP10.1□□□□□ -0.79
ERBB2-206ENST00000578373 OR4A47Q6IF82 309 aa10.1□□□□□ -0.79
ERBB2-206ENST00000578373 AHRRA9YTQ3 701 aa10.09□□□□□ -0.79
ERBB2-206ENST00000578373 SP9P0CG40 484 aa10.09□□□□□ -0.79
ERBB2-206ENST00000578373 ZNF324BQ6AW86 544 aaPredicted RBP10.09□□□□□ -0.79
ERBB2-206ENST00000578373 FAM53AQ6NSI3 398 aaPredicted RBP10.09□□□□□ -0.79
ERBB2-206ENST00000578373 REC114Q7Z4M0 266 aa10.09□□□□□ -0.79
ERBB2-206ENST00000578373 C1QL4Q86Z23 238 aa10.09□□□□□ -0.79
ERBB2-206ENST00000578373 WDYHV1Q96HA8 205 aa10.09□□□□□ -0.79
ERBB2-206ENST00000578373 C1orf147Q96MC9 270 aaPredicted RBP10.09□□□□□ -0.79
ERBB2-206ENST00000578373 DERL1Q9BUN8 251 aa10.09□□□□□ -0.79
ERBB2-206ENST00000578373 MAP1LC3CQ9BXW4 147 aa10.09□□□□□ -0.79
ERBB2-206ENST00000578373 IDI2-AS1Q9NZ38 188 aa10.09□□□□□ -0.79
ERBB2-206ENST00000578373 JPT1Q9UK76 154 aa10.09□□□□□ -0.79
ERBB2-206ENST00000578373 A8MWL6 223 aa10.09□□□□□ -0.79
ERBB2-206ENST00000578373 SIAH2O43255 324 aa10.09□□□□□ -0.79
ERBB2-206ENST00000578373 CA1P00915 261 aaPredicted RBP10.09□□□□□ -0.79
ERBB2-206ENST00000578373 PAFAH1B2P68402 229 aa10.09□□□□□ -0.79
ERBB2-206ENST00000578373 Q0VFX4 171 aa10.09□□□□□ -0.79
ERBB2-206ENST00000578373 KIR3DL3Q8N743 410 aa10.09□□□□□ -0.79
ERBB2-206ENST00000578373 ZNF729A6NN14 1252 aaPredicted RBP10.09□□□□□ -0.79
ERBB2-206ENST00000578373 FCGR2BP31994 310 aaPredicted RBP10.09□□□□□ -0.79
ERBB2-206ENST00000578373 ACSF3Q4G176 576 aaPredicted RBP10.09□□□□□ -0.79
ERBB2-206ENST00000578373 HIGD1AQ9Y241 93 aa10.09□□□□□ -0.79
ERBB2-206ENST00000578373 IGKV1-5P01602 117 aa10.08□□□□□ -0.8
ERBB2-206ENST00000578373 CD99P14209 185 aa10.08□□□□□ -0.8
ERBB2-206ENST00000578373 CD82P27701 267 aa10.08□□□□□ -0.8
ERBB2-206ENST00000578373 PYY3Q5JQD4 70 aa10.08□□□□□ -0.8
ERBB2-206ENST00000578373 COL5A1-AS1Q5SY13 56 aa10.08□□□□□ -0.8
ERBB2-206ENST00000578373 GUCD1Q96NT3 240 aa10.08□□□□□ -0.8
ERBB2-206ENST00000578373 TUBA4BQ9H853 241 aa10.08□□□□□ -0.8
ERBB2-206ENST00000578373 METRNQ9UJH8 293 aa10.08□□□□□ -0.8
ERBB2-206ENST00000578373 IFITM10A6NMD0 228 aa10.08□□□□□ -0.8
ERBB2-206ENST00000578373 NMUP48645 174 aa10.08□□□□□ -0.8
ERBB2-206ENST00000578373 PPOXP50336 477 aa10.08□□□□□ -0.8
ERBB2-206ENST00000578373 TNFSF10P50591 281 aa10.08□□□□□ -0.8
ERBB2-206ENST00000578373 Q1RN00 199 aa10.08□□□□□ -0.8
ERBB2-206ENST00000578373 C1orf185Q5T7R7 199 aa10.08□□□□□ -0.8
ERBB2-206ENST00000578373 SRSF12Q8WXF0 261 aaKnown RBP10.08□□□□□ -0.8
ERBB2-206ENST00000578373 ZNF430Q9H8G1 570 aaPredicted RBP10.08□□□□□ -0.8
ERBB2-206ENST00000578373 CDX4O14627 284 aaPredicted RBP10.08□□□□□ -0.8
ERBB2-206ENST00000578373 HERPUD1Q15011 391 aa10.08□□□□□ -0.8
ERBB2-206ENST00000578373 GOLT1AQ6ZVE7 132 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms