RNA–Protein interactions for RNA: ENST00000578172.1

NDEL1-204, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

Gene NDEL1, Length 3,927 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-204ENST00000578172 PPIHO43447 177 aaKnown RBP11.34□□□□□ -0.59
NDEL1-204ENST00000578172 CD82P27701 267 aa11.34□□□□□ -0.59
NDEL1-204ENST00000578172 LINC00596Q86U02 117 aa11.34□□□□□ -0.59
NDEL1-204ENST00000578172 ARHGAP32A7KAX9 2087 aa11.34□□□□□ -0.59
NDEL1-204ENST00000578172 SNURFLB1AK76 121 aa11.33□□□□□ -0.6
NDEL1-204ENST00000578172 ZNF134P52741 427 aa11.33□□□□□ -0.6
NDEL1-204ENST00000578172 OR10W1Q8NGF6 305 aa11.33□□□□□ -0.6
NDEL1-204ENST00000578172 COL5A1P20908 1838 aaPredicted RBP11.33□□□□□ -0.6
NDEL1-204ENST00000578172 CCL3L1P16619 93 aa11.33□□□□□ -0.6
NDEL1-204ENST00000578172 NPY1RP25929 384 aa11.33□□□□□ -0.6
NDEL1-204ENST00000578172 CRYBB3P26998 211 aa11.33□□□□□ -0.6
NDEL1-204ENST00000578172 CAMPP49913 170 aa11.33□□□□□ -0.6
NDEL1-204ENST00000578172 ZNF146Q15072 292 aa11.33□□□□□ -0.6
NDEL1-204ENST00000578172 STUMQ69YW2 141 aa11.33□□□□□ -0.6
NDEL1-204ENST00000578172 KIR3DL3Q8N743 410 aa11.33□□□□□ -0.6
NDEL1-204ENST00000578172 CALYQ9NYX4 217 aa11.33□□□□□ -0.6
NDEL1-204ENST00000578172 CCKARP32238 428 aa11.33□□□□□ -0.6
NDEL1-204ENST00000578172 ARSJQ5FYB0 599 aaPredicted RBP11.33□□□□□ -0.6
NDEL1-204ENST00000578172 C10orf55Q5SWW7 151 aa11.33□□□□□ -0.6
NDEL1-204ENST00000578172 TMEM14EPQ6UXP3 125 aa11.33□□□□□ -0.6
NDEL1-204ENST00000578172 ZADH2Q8N4Q0 377 aa11.33□□□□□ -0.6
NDEL1-204ENST00000578172 HSPB7Q9UBY9 170 aa11.33□□□□□ -0.6
NDEL1-204ENST00000578172 TRGV10A0A0A0MS01 117 aa11.32□□□□□ -0.6
NDEL1-204ENST00000578172 IQCF6A8MYZ5 107 aa11.32□□□□□ -0.6
NDEL1-204ENST00000578172 HPRT1P00492 218 aa11.32□□□□□ -0.6
NDEL1-204ENST00000578172 HRASP01112 189 aa11.32□□□□□ -0.6
NDEL1-204ENST00000578172 CHRNB4P30926 498 aa11.32□□□□□ -0.6
NDEL1-204ENST00000578172 HOXA6P31267 233 aa11.32□□□□□ -0.6
NDEL1-204ENST00000578172 ZNF331Q9NQX6 463 aaPredicted RBP11.32□□□□□ -0.6
NDEL1-204ENST00000578172 GCGP01275 180 aa11.32□□□□□ -0.6
NDEL1-204ENST00000578172 RPL31P62899 125 aaKnown RBP11.32□□□□□ -0.6
NDEL1-204ENST00000578172 NRN1LQ496H8 165 aa11.32□□□□□ -0.6
NDEL1-204ENST00000578172 CYP2G1PQ6ZSU1 146 aa11.32□□□□□ -0.6
NDEL1-204ENST00000578172 OR8I2Q8N0Y5 310 aa11.32□□□□□ -0.6
NDEL1-204ENST00000578172 PSMG3Q9BT73 122 aaPredicted RBP11.32□□□□□ -0.6
NDEL1-204ENST00000578172 SMDT1Q9H4I9 107 aa11.32□□□□□ -0.6
NDEL1-204ENST00000578172 SLC35D1Q9NTN3 355 aa11.32□□□□□ -0.6
NDEL1-204ENST00000578172 PTPRQQ9UMZ3 2332 aa11.32□□□□□ -0.6
NDEL1-204ENST00000578172 IGKV1D-17A0A075B6S4 117 aa11.32□□□□□ -0.6
NDEL1-204ENST00000578172 C15orf62A8K5M9 175 aa11.32□□□□□ -0.6
NDEL1-204ENST00000578172 CA2P00918 260 aa11.32□□□□□ -0.6
NDEL1-204ENST00000578172 MSMPQ1L6U9 139 aa11.32□□□□□ -0.6
NDEL1-204ENST00000578172 MIR17HGQ75NE6 70 aa11.32□□□□□ -0.6
NDEL1-204ENST00000578172 IGFBPL1Q8WX77 278 aa11.32□□□□□ -0.6
NDEL1-204ENST00000578172 WNT10AQ9GZT5 417 aa11.32□□□□□ -0.6
NDEL1-204ENST00000578172 DNAJC4Q9NNZ3 241 aa11.32□□□□□ -0.6
NDEL1-204ENST00000578172 MRPS18CQ9Y3D5 142 aaKnown RBP11.32□□□□□ -0.6
NDEL1-204ENST00000578172 ADAMTS20P59510 1910 aa11.32□□□□□ -0.6
NDEL1-204ENST00000578172 DIRC3C9JPN6 131 aa11.31□□□□□ -0.6
NDEL1-204ENST00000578172 J3QR06 171 aa11.31□□□□□ -0.6
NDEL1-204ENST00000578172 MMP23AO75900 390 aa11.31□□□□□ -0.6
NDEL1-204ENST00000578172 FRMD6-AS1P0C7T7 363 aa11.31□□□□□ -0.6
NDEL1-204ENST00000578172 IL3RAP26951 378 aa11.31□□□□□ -0.6
NDEL1-204ENST00000578172 DUTP33316 252 aaKnown RBP11.31□□□□□ -0.6
NDEL1-204ENST00000578172 JOSD1Q15040 202 aaPredicted RBP11.31□□□□□ -0.6
NDEL1-204ENST00000578172 HCP5Q6MZN7 132 aa11.31□□□□□ -0.6
NDEL1-204ENST00000578172 TECRQ9NZ01 308 aaKnown RBP11.31□□□□□ -0.6
NDEL1-204ENST00000578172 MT-CO2P00403 227 aa11.31□□□□□ -0.6
NDEL1-204ENST00000578172 TDGF1P13385 188 aa11.31□□□□□ -0.6
NDEL1-204ENST00000578172 PEAR1Q5VY43 1037 aaPredicted RBP11.31□□□□□ -0.6
NDEL1-204ENST00000578172 RNASEKQ6P5S7 137 aaKnown RBP11.31□□□□□ -0.6
NDEL1-204ENST00000578172 CISD2Q8N5K1 135 aaKnown RBP11.31□□□□□ -0.6
NDEL1-204ENST00000578172 STPG3Q8N7X2 389 aa11.31□□□□□ -0.6
NDEL1-204ENST00000578172 WDR31Q8NA23 367 aa11.31□□□□□ -0.6
NDEL1-204ENST00000578172 OR10G8Q8NGN5 311 aa11.31□□□□□ -0.6
NDEL1-204ENST00000578172 OR10X1Q8NGY0 326 aa11.31□□□□□ -0.6
NDEL1-204ENST00000578172 MBD3L1Q8WWY6 194 aa11.31□□□□□ -0.6
NDEL1-204ENST00000578172 MANBALQ9NQG1 85 aa11.31□□□□□ -0.6
NDEL1-204ENST00000578172 PPIAL4AQ9Y536 164 aa11.31□□□□□ -0.6
NDEL1-204ENST00000578172 DYSFO75923 2080 aa11.31□□□□□ -0.6
NDEL1-204ENST00000578172 PIGBOS1A0A0B4J2F0 54 aa11.31□□□□□ -0.6
NDEL1-204ENST00000578172 GZMBP10144 247 aa11.31□□□□□ -0.6
NDEL1-204ENST00000578172 ORM2P19652 201 aa11.31□□□□□ -0.6
NDEL1-204ENST00000578172 NPPCP23582 126 aa11.31□□□□□ -0.6
NDEL1-204ENST00000578172 BRWD1-AS2P59051 145 aa11.31□□□□□ -0.6
NDEL1-204ENST00000578172 Q56UQ5 140 aa11.31□□□□□ -0.6
NDEL1-204ENST00000578172 SLC35E4Q6ICL7 350 aa11.31□□□□□ -0.6
NDEL1-204ENST00000578172 GCSAMQ8N6F7 178 aa11.31□□□□□ -0.6
NDEL1-204ENST00000578172 TMEM68Q96MH6 324 aa11.31□□□□□ -0.6
NDEL1-204ENST00000578172 RNASE7Q9H1E1 156 aaKnown RBP11.31□□□□□ -0.6
NDEL1-204ENST00000578172 PRDM13Q9H4Q3 707 aa11.31□□□□□ -0.6
NDEL1-204ENST00000578172 DYNLRB1Q9NP97 96 aa11.31□□□□□ -0.6
NDEL1-204ENST00000578172 RAB29O14966 203 aa11.3□□□□□ -0.6
NDEL1-204ENST00000578172 NUTF2P61970 127 aaKnown RBP11.3□□□□□ -0.6
NDEL1-204ENST00000578172 MORN2Q502X0 79 aa11.3□□□□□ -0.6
NDEL1-204ENST00000578172 PQLC2Q6ZP29 291 aa11.3□□□□□ -0.6
NDEL1-204ENST00000578172 C11orf53Q8IXP5 236 aa11.3□□□□□ -0.6
NDEL1-204ENST00000578172 SLC24A4Q8NFF2 622 aa11.3□□□□□ -0.6
NDEL1-204ENST00000578172 COMMD5Q9GZQ3 224 aa11.3□□□□□ -0.6
NDEL1-204ENST00000578172 SRD5A3Q9H8P0 318 aa11.3□□□□□ -0.6
NDEL1-204ENST00000578172 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.3□□□□□ -0.6
NDEL1-204ENST00000578172 ERVK11-1P61568 191 aa11.3□□□□□ -0.6
NDEL1-204ENST00000578172 TIGITQ495A1 244 aa11.3□□□□□ -0.6
NDEL1-204ENST00000578172 COL5A1-AS1Q5SY13 56 aa11.3□□□□□ -0.6
NDEL1-204ENST00000578172 OCC1Q8TAD7 63 aa11.3□□□□□ -0.6
NDEL1-204ENST00000578172 A0A087WWC5 75 aa11.3□□□□□ -0.6
NDEL1-204ENST00000578172 SAA2-SAA4A0A096LPE2 208 aa11.3□□□□□ -0.6
NDEL1-204ENST00000578172 SAA2P0DJI9 122 aaPredicted RBP11.3□□□□□ -0.6
NDEL1-204ENST00000578172 OPRK1P41145 380 aa11.3□□□□□ -0.6
NDEL1-204ENST00000578172 ACSF3Q4G176 576 aaPredicted RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms