RNA–Protein interactions for RNA: ENST00000578049.3

SEC22B-201, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22B, Length 6,922 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-201ENST00000578049 A0A1W2PRD5 423 aa9.07□□□□□ -0.96
SEC22B-201ENST00000578049 A0A1W2PRF3 423 aa9.07□□□□□ -0.96
SEC22B-201ENST00000578049 A0A1W2PRM7 423 aa9.07□□□□□ -0.96
SEC22B-201ENST00000578049 GPR183P32249 361 aa9.07□□□□□ -0.96
SEC22B-201ENST00000578049 FOXA3P55318 350 aaPredicted RBP9.07□□□□□ -0.96
SEC22B-201ENST00000578049 DYNLRB2Q8TF09 96 aa9.07□□□□□ -0.96
SEC22B-201ENST00000578049 TMEM171Q8WVE6 324 aa9.07□□□□□ -0.96
SEC22B-201ENST00000578049 JKAMPQ9P055 326 aa9.07□□□□□ -0.96
SEC22B-201ENST00000578049 DOCK5Q9H7D0 1870 aa9.07□□□□□ -0.96
SEC22B-201ENST00000578049 TBX6O95947 436 aaPredicted RBP9.07□□□□□ -0.96
SEC22B-201ENST00000578049 IGLV3-19P01714 112 aa9.07□□□□□ -0.96
SEC22B-201ENST00000578049 SPRED2Q7Z698 418 aa9.07□□□□□ -0.96
SEC22B-201ENST00000578049 C14orf144Q96I85 54 aa9.07□□□□□ -0.96
SEC22B-201ENST00000578049 EAF1Q96JC9 268 aaPredicted RBP9.07□□□□□ -0.96
SEC22B-201ENST00000578049 GREB1LQ9C091 1923 aaPredicted RBP9.07□□□□□ -0.96
SEC22B-201ENST00000578049 IGLV3-12A0A075B6K2 115 aa9.07□□□□□ -0.96
SEC22B-201ENST00000578049 A0A1B0GWB2 263 aa9.07□□□□□ -0.96
SEC22B-201ENST00000578049 OTX1P32242 354 aaPredicted RBP9.07□□□□□ -0.96
SEC22B-201ENST00000578049 ATP5G3P48201 142 aa9.07□□□□□ -0.96
SEC22B-201ENST00000578049 WNT10AQ9GZT5 417 aa9.07□□□□□ -0.96
SEC22B-201ENST00000578049 SLC17A3O00476 420 aa9.06□□□□□ -0.96
SEC22B-201ENST00000578049 TIMM23BQ5SRD1 257 aa9.06□□□□□ -0.96
SEC22B-201ENST00000578049 YPEL1O60688 119 aa9.06□□□□□ -0.96
SEC22B-201ENST00000578049 YPEL2Q96QA6 119 aa9.06□□□□□ -0.96
SEC22B-201ENST00000578049 OTORQ9NRC9 128 aa9.06□□□□□ -0.96
SEC22B-201ENST00000578049 TRIP12Q14669 1992 aaPredicted RBP9.06□□□□□ -0.96
SEC22B-201ENST00000578049 ADAMTSL1Q8N6G6 1762 aa9.06□□□□□ -0.96
SEC22B-201ENST00000578049 TFF3Q07654 80 aa9.06□□□□□ -0.96
SEC22B-201ENST00000578049 FAM166AQ6J272 317 aa9.06□□□□□ -0.96
SEC22B-201ENST00000578049 TEX38Q6PEX7 206 aa9.06□□□□□ -0.96
SEC22B-201ENST00000578049 KBTBD11-OT1A0A1B0GTJ5 212 aa9.06□□□□□ -0.96
SEC22B-201ENST00000578049 C17orf98A8MV24 154 aa9.06□□□□□ -0.96
SEC22B-201ENST00000578049 LDLRAD4O15165 306 aa9.06□□□□□ -0.96
SEC22B-201ENST00000578049 CELA2AP08217 269 aa9.06□□□□□ -0.96
SEC22B-201ENST00000578049 C1orf194Q5T5A4 169 aa9.06□□□□□ -0.96
SEC22B-201ENST00000578049 EEF1AKMT3Q96AZ1 226 aa9.06□□□□□ -0.96
SEC22B-201ENST00000578049 MRPL16Q9NX20 251 aaKnown RBP9.06□□□□□ -0.96
SEC22B-201ENST00000578049 R4GN57 208 aa9.06□□□□□ -0.96
SEC22B-201ENST00000578049 C9JCJ5 164 aa9.06□□□□□ -0.96
SEC22B-201ENST00000578049 TMEM262E9PQX1 116 aa9.06□□□□□ -0.96
SEC22B-201ENST00000578049 CRXO43186 299 aaPredicted RBP9.06□□□□□ -0.96
SEC22B-201ENST00000578049 RTN4RL2Q86UN3 420 aa9.06□□□□□ -0.96
SEC22B-201ENST00000578049 PAQR4Q8N4S7 273 aaPredicted RBP9.06□□□□□ -0.96
SEC22B-201ENST00000578049 FAM169BQ8N8A8 192 aa9.06□□□□□ -0.96
SEC22B-201ENST00000578049 DDB2Q92466 427 aa9.06□□□□□ -0.96
SEC22B-201ENST00000578049 C2orf88Q9BSF0 95 aa9.06□□□□□ -0.96
SEC22B-201ENST00000578049 CYTL1Q9NRR1 136 aa9.06□□□□□ -0.96
SEC22B-201ENST00000578049 ZNF257Q9Y2Q1 563 aa9.06□□□□□ -0.96
SEC22B-201ENST00000578049 PPIAL4CA0A0B4J2A2 164 aa9.05□□□□□ -0.96
SEC22B-201ENST00000578049 PPIAL4GP0DN37 164 aa9.05□□□□□ -0.96
SEC22B-201ENST00000578049 IGFBP2P18065 325 aa9.05□□□□□ -0.96
SEC22B-201ENST00000578049 FOXC1Q12948 553 aa9.05□□□□□ -0.96
SEC22B-201ENST00000578049 RBBP6Q7Z6E9 1792 aaKnown RBP9.05□□□□□ -0.96
SEC22B-201ENST00000578049 SLC25A2Q9BXI2 301 aa9.05□□□□□ -0.96
SEC22B-201ENST00000578049 SMPXQ9UHP9 88 aa9.05□□□□□ -0.96
SEC22B-201ENST00000578049 F11RQ9Y624 299 aaKnown RBP9.05□□□□□ -0.96
SEC22B-201ENST00000578049 LOC101059948A0A1B0GTJ6 334 aa9.05□□□□□ -0.96
SEC22B-201ENST00000578049 J3KRW8 73 aa9.05□□□□□ -0.96
SEC22B-201ENST00000578049 OR9G4Q8NGQ1 327 aa9.05□□□□□ -0.96
SEC22B-201ENST00000578049 NXT2Q9NPJ8 142 aaKnown RBP9.05□□□□□ -0.96
SEC22B-201ENST00000578049 ELOVL5Q9NYP7 299 aa9.05□□□□□ -0.96
SEC22B-201ENST00000578049 IGKV1D-43A0A0B4J1Z2 117 aa9.05□□□□□ -0.96
SEC22B-201ENST00000578049 IQCF6A8MYZ5 107 aa9.05□□□□□ -0.96
SEC22B-201ENST00000578049 DNAL4O96015 105 aa9.05□□□□□ -0.96
SEC22B-201ENST00000578049 TYMSP04818 313 aa9.05□□□□□ -0.96
SEC22B-201ENST00000578049 ADRA2AP08913 450 aa9.05□□□□□ -0.96
SEC22B-201ENST00000578049 AGMATQ9BSE5 352 aa9.05□□□□□ -0.96
SEC22B-201ENST00000578049 GEMIN7Q9H840 131 aaKnown RBP9.05□□□□□ -0.96
SEC22B-201ENST00000578049 PLXNB2O15031 1838 aa9.05□□□□□ -0.96
SEC22B-201ENST00000578049 ANKRD36A6QL64 1941 aa9.05□□□□□ -0.96
SEC22B-201ENST00000578049 COL4A1P02462 1669 aa9.05□□□□□ -0.96
SEC22B-201ENST00000578049 GPX1P07203 203 aa9.05□□□□□ -0.96
SEC22B-201ENST00000578049 RNF224P0DH78 156 aa9.05□□□□□ -0.96
SEC22B-201ENST00000578049 APELAP0DMC3 54 aa9.05□□□□□ -0.96
SEC22B-201ENST00000578049 TEX45Q8NA69 505 aa9.05□□□□□ -0.96
SEC22B-201ENST00000578049 GDF15Q99988 308 aa9.05□□□□□ -0.96
SEC22B-201ENST00000578049 FBLN7Q53RD9 439 aa9.05□□□□□ -0.96
SEC22B-201ENST00000578049 GFI1Q99684 422 aa9.05□□□□□ -0.96
SEC22B-201ENST00000578049 B9A039 149 aa9.04□□□□□ -0.96
SEC22B-201ENST00000578049 LINC00312Q9Y6C7 94 aa9.04□□□□□ -0.96
SEC22B-201ENST00000578049 IGKV1-9A0A0C4DH69 117 aa9.04□□□□□ -0.96
SEC22B-201ENST00000578049 HIGD1CA8MV81 97 aa9.04□□□□□ -0.96
SEC22B-201ENST00000578049 PPP1R32Q7Z5V6 425 aa9.04□□□□□ -0.96
SEC22B-201ENST00000578049 ASCL2Q99929 193 aa9.04□□□□□ -0.96
SEC22B-201ENST00000578049 C15orf61A6NNL5 157 aa9.04□□□□□ -0.96
SEC22B-201ENST00000578049 HBDP02042 147 aa9.04□□□□□ -0.96
SEC22B-201ENST00000578049 AMBPP02760 352 aa9.04□□□□□ -0.96
SEC22B-201ENST00000578049 CFPP27918 469 aa9.04□□□□□ -0.96
SEC22B-201ENST00000578049 EMP1P54849 157 aa9.04□□□□□ -0.96
SEC22B-201ENST00000578049 PVRIGQ6DKI7 326 aa9.04□□□□□ -0.96
SEC22B-201ENST00000578049 LTBP4Q8N2S1 1624 aa9.04□□□□□ -0.96
SEC22B-201ENST00000578049 SCN10AQ9Y5Y9 1956 aa9.04□□□□□ -0.96
SEC22B-201ENST00000578049 IGHV3-72A0A0B4J1Y9 119 aa9.04□□□□□ -0.96
SEC22B-201ENST00000578049 TRAV8-6A0A0B4J262 113 aa9.04□□□□□ -0.96
SEC22B-201ENST00000578049 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.04□□□□□ -0.96
SEC22B-201ENST00000578049 LYL1P12980 280 aa9.04□□□□□ -0.96
SEC22B-201ENST00000578049 SRSF3P84103 164 aaKnown RBP9.04□□□□□ -0.96
SEC22B-201ENST00000578049 PRSS8Q16651 343 aa9.04□□□□□ -0.96
SEC22B-201ENST00000578049 RAX2Q96IS3 184 aa9.04□□□□□ -0.96
SEC22B-201ENST00000578049 RGPD3A6NKT7 1758 aaPredicted RBP9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms