RNA–Protein interactions for RNA: ENST00000577725.1

CRLF3-202, Transcript of cytokine receptor like factor 3, humanhuman

TSL 5

Gene CRLF3, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-202ENST00000577725 C22orf15Q8WYQ4 148 aa8.02□□□□□ -1.13
CRLF3-202ENST00000577725 TSNAXQ99598 290 aaKnown RBP8.02□□□□□ -1.13
CRLF3-202ENST00000577725 ZC4H2Q9NQZ6 224 aa8.02□□□□□ -1.13
CRLF3-202ENST00000577725 COA4Q9NYJ1 87 aa8.02□□□□□ -1.13
CRLF3-202ENST00000577725 BET1LQ9NYM9 111 aa8.02□□□□□ -1.13
CRLF3-202ENST00000577725 METTL1Q9UBP6 276 aaKnown RBP8.02□□□□□ -1.13
CRLF3-202ENST00000577725 HSPB7Q9UBY9 170 aa8.02□□□□□ -1.13
CRLF3-202ENST00000577725 PFDN2Q9UHV9 154 aa8.02□□□□□ -1.13
CRLF3-202ENST00000577725 NUP50Q9UKX7 468 aa8.02□□□□□ -1.13
CRLF3-202ENST00000577725 TCF19Q9Y242 345 aa8.02□□□□□ -1.13
CRLF3-202ENST00000577725 OR51B2Q9Y5P1 312 aa8.02□□□□□ -1.13
CRLF3-202ENST00000577725 HMSDA8MTL9 139 aa8.01□□□□□ -1.13
CRLF3-202ENST00000577725 E5RGE8 158 aa8.01□□□□□ -1.13
CRLF3-202ENST00000577725 CRYGBP07316 175 aa8.01□□□□□ -1.13
CRLF3-202ENST00000577725 HKR1P10072 659 aa8.01□□□□□ -1.13
CRLF3-202ENST00000577725 LGALS7P47929 136 aa8.01□□□□□ -1.13
CRLF3-202ENST00000577725 HOXA1P49639 335 aaPredicted RBP8.01□□□□□ -1.13
CRLF3-202ENST00000577725 MMDQ15546 238 aa8.01□□□□□ -1.13
CRLF3-202ENST00000577725 LY6EQ16553 131 aa8.01□□□□□ -1.13
CRLF3-202ENST00000577725 TMEM65Q6PI78 240 aa8.01□□□□□ -1.13
CRLF3-202ENST00000577725 Q8N6K4 173 aa8.01□□□□□ -1.13
CRLF3-202ENST00000577725 OR2T10Q8NGZ9 312 aa8.01□□□□□ -1.13
CRLF3-202ENST00000577725 OR4C12Q96R67 309 aa8.01□□□□□ -1.13
CRLF3-202ENST00000577725 SMIM3Q9BZL3 60 aa8.01□□□□□ -1.13
CRLF3-202ENST00000577725 ZNF430Q9H8G1 570 aaPredicted RBP8.01□□□□□ -1.13
CRLF3-202ENST00000577725 PSENENQ9NZ42 101 aa8.01□□□□□ -1.13
CRLF3-202ENST00000577725 PRNDQ9UKY0 176 aa8.01□□□□□ -1.13
CRLF3-202ENST00000577725 PAIP2BQ9ULR5 123 aaKnown RBP8.01□□□□□ -1.13
CRLF3-202ENST00000577725 FOXA2Q9Y261 457 aaPredicted RBP8.01□□□□□ -1.13
CRLF3-202ENST00000577725 FAM96BQ9Y3D0 163 aa8.01□□□□□ -1.13
CRLF3-202ENST00000577725 TEX50A0A1B0GTY4 177 aa8□□□□□ -1.13
CRLF3-202ENST00000577725 SH2D7A6NKC9 451 aaPredicted RBP8□□□□□ -1.13
CRLF3-202ENST00000577725 FAM90A26D6RGX4 464 aa8□□□□□ -1.13
CRLF3-202ENST00000577725 E7EUB6 86 aa8□□□□□ -1.13
CRLF3-202ENST00000577725 FCN1O00602 326 aa8□□□□□ -1.13
CRLF3-202ENST00000577725 RRHO14718 337 aa8□□□□□ -1.13
CRLF3-202ENST00000577725 NBR2O15453 112 aa8□□□□□ -1.13
CRLF3-202ENST00000577725 GPR137BO60478 399 aa8□□□□□ -1.13
CRLF3-202ENST00000577725 MED6O75586 246 aa8□□□□□ -1.13
CRLF3-202ENST00000577725 FSHBP01225 129 aa8□□□□□ -1.13
CRLF3-202ENST00000577725 PVALBP20472 110 aaPredicted RBP8□□□□□ -1.13
CRLF3-202ENST00000577725 RPL12P30050 165 aaKnown RBP8□□□□□ -1.13
CRLF3-202ENST00000577725 NUP62P37198 522 aaPredicted RBP8□□□□□ -1.13
CRLF3-202ENST00000577725 CAV2P51636 162 aa8□□□□□ -1.13
CRLF3-202ENST00000577725 SPCS3P61009 180 aa8□□□□□ -1.13
CRLF3-202ENST00000577725 RPL8P62917 257 aaKnown RBP8□□□□□ -1.13
CRLF3-202ENST00000577725 OPCMLQ14982 345 aa8□□□□□ -1.13
CRLF3-202ENST00000577725 PLGLAQ15195 96 aa8□□□□□ -1.13
CRLF3-202ENST00000577725 PRSS8Q16651 343 aa8□□□□□ -1.13
CRLF3-202ENST00000577725 DEFB112Q30KQ8 113 aa8□□□□□ -1.13
CRLF3-202ENST00000577725 ACOT7LQ6ZUV0 252 aa8□□□□□ -1.13
CRLF3-202ENST00000577725 TMEM219Q86XT9 240 aa8□□□□□ -1.13
CRLF3-202ENST00000577725 TEX45Q8NA69 505 aa8□□□□□ -1.13
CRLF3-202ENST00000577725 INO80EQ8NBZ0 244 aaPredicted RBP8□□□□□ -1.13
CRLF3-202ENST00000577725 DTD1Q8TEA8 209 aa8□□□□□ -1.13
CRLF3-202ENST00000577725 AIFM2Q9BRQ8 373 aa8□□□□□ -1.13
CRLF3-202ENST00000577725 ARL6Q9H0F7 186 aa8□□□□□ -1.13
CRLF3-202ENST00000577725 ZFP57Q9NU63 452 aa8□□□□□ -1.13
CRLF3-202ENST00000577725 TMEM14BQ9NUH8 114 aa8□□□□□ -1.13
CRLF3-202ENST00000577725 SIGLEC9Q9Y336 463 aa8□□□□□ -1.13
CRLF3-202ENST00000577725 A0A1B0GW64 132 aa7.99□□□□□ -1.13
CRLF3-202ENST00000577725 CGB1A6NKQ9 187 aa7.99□□□□□ -1.13
CRLF3-202ENST00000577725 NCBP2LA6PVI3 153 aaKnown RBP7.99□□□□□ -1.13
CRLF3-202ENST00000577725 CST7O76096 145 aa7.99□□□□□ -1.13
CRLF3-202ENST00000577725 CA2P00918 260 aa7.99□□□□□ -1.13
CRLF3-202ENST00000577725 APELAP0DMC3 54 aa7.99□□□□□ -1.13
CRLF3-202ENST00000577725 BRS3P32247 399 aa7.99□□□□□ -1.13
CRLF3-202ENST00000577725 VDAC2P45880 294 aaPredicted RBP7.99□□□□□ -1.13
CRLF3-202ENST00000577725 P2RY1P47900 373 aa7.99□□□□□ -1.13
CRLF3-202ENST00000577725 ARHGDIBP52566 201 aa7.99□□□□□ -1.13
CRLF3-202ENST00000577725 HSPE1P61604 102 aaKnown RBP7.99□□□□□ -1.13
CRLF3-202ENST00000577725 RPL23AP62750 156 aaKnown RBP7.99□□□□□ -1.13
CRLF3-202ENST00000577725 EWSR1Q01844 656 aaKnown RBP eCLIP7.99□□□□□ -1.13
CRLF3-202ENST00000577725 NHLH2Q02577 135 aa7.99□□□□□ -1.13
CRLF3-202ENST00000577725 TNXAQ16473 311 aa7.99□□□□□ -1.13
CRLF3-202ENST00000577725 LRRC75BQ2VPJ9 315 aa7.99□□□□□ -1.13
CRLF3-202ENST00000577725 AARDQ4LEZ3 155 aa7.99□□□□□ -1.13
CRLF3-202ENST00000577725 SPANXN5Q5MJ07 72 aa7.99□□□□□ -1.13
CRLF3-202ENST00000577725 REC114Q7Z4M0 266 aa7.99□□□□□ -1.13
CRLF3-202ENST00000577725 KCNRGQ8N5I3 272 aa7.99□□□□□ -1.13
CRLF3-202ENST00000577725 OR2C3Q8N628 320 aa7.99□□□□□ -1.13
CRLF3-202ENST00000577725 NPBQ8NG41 125 aa7.99□□□□□ -1.13
CRLF3-202ENST00000577725 OR10W1Q8NGF6 305 aa7.99□□□□□ -1.13
CRLF3-202ENST00000577725 OR4A5Q8NH83 315 aa7.99□□□□□ -1.13
CRLF3-202ENST00000577725 VSTM2AQ8TAG5 236 aa7.99□□□□□ -1.13
CRLF3-202ENST00000577725 SMIM8Q96KF7 97 aa7.99□□□□□ -1.13
CRLF3-202ENST00000577725 AQP10Q96PS8 301 aa7.99□□□□□ -1.13
CRLF3-202ENST00000577725 RAB40CQ96S21 281 aa7.99□□□□□ -1.13
CRLF3-202ENST00000577725 SSX3Q99909 188 aa7.99□□□□□ -1.13
CRLF3-202ENST00000577725 MEGF9Q9H1U4 602 aa7.99□□□□□ -1.13
CRLF3-202ENST00000577725 WFDC1Q9HC57 220 aa7.99□□□□□ -1.13
CRLF3-202ENST00000577725 KIAA1456Q9P272 454 aa7.99□□□□□ -1.13
CRLF3-202ENST00000577725 H3BUX3 64 aa7.98□□□□□ -1.13
CRLF3-202ENST00000577725 NDUFA3O95167 84 aa7.98□□□□□ -1.13
CRLF3-202ENST00000577725 SPDEFO95238 335 aa7.98□□□□□ -1.13
CRLF3-202ENST00000577725 REG1AP05451 166 aa7.98□□□□□ -1.13
CRLF3-202ENST00000577725 FGF2P09038 288 aa7.98□□□□□ -1.13
CRLF3-202ENST00000577725 FBP1P09467 338 aa7.98□□□□□ -1.13
CRLF3-202ENST00000577725 METTL15P1P0C7V9 234 aa7.98□□□□□ -1.13
CRLF3-202ENST00000577725 FAM106CPP0CH98 169 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms