RNA–Protein interactions for RNA: ENST00000577625.5

RNF43-202, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,198 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-202ENST00000577625 ZNF695Q8IW36 515 aa11.41□□□□□ -0.58
RNF43-202ENST00000577625 SELENOHQ8IZQ5 122 aaKnown RBP11.41□□□□□ -0.58
RNF43-202ENST00000577625 OR5D13Q8NGL4 314 aa11.41□□□□□ -0.58
RNF43-202ENST00000577625 OR13A1Q8NGR1 328 aa11.41□□□□□ -0.58
RNF43-202ENST00000577625 VPS25Q9BRG1 176 aa11.41□□□□□ -0.58
RNF43-202ENST00000577625 CSTL1Q9H114 145 aa11.41□□□□□ -0.58
RNF43-202ENST00000577625 HSPB7Q9UBY9 170 aa11.41□□□□□ -0.58
RNF43-202ENST00000577625 TRAPPC1Q9Y5R8 145 aa11.41□□□□□ -0.58
RNF43-202ENST00000577625 COX11Q9Y6N1 276 aa11.41□□□□□ -0.58
RNF43-202ENST00000577625 VSTM5A8MXK1 200 aa11.41□□□□□ -0.58
RNF43-202ENST00000577625 TNFSF12O43508 249 aa11.41□□□□□ -0.58
RNF43-202ENST00000577625 CD3EP07766 207 aa11.41□□□□□ -0.58
RNF43-202ENST00000577625 PLA2G5P39877 138 aa11.41□□□□□ -0.58
RNF43-202ENST00000577625 CLEC12BQ2HXU8 276 aa11.41□□□□□ -0.58
RNF43-202ENST00000577625 TMEM41BQ5BJD5 291 aa11.41□□□□□ -0.58
RNF43-202ENST00000577625 ZCCHC24Q8N2G6 241 aaKnown RBP11.41□□□□□ -0.58
RNF43-202ENST00000577625 OR4C5Q8NGB2 326 aa11.41□□□□□ -0.58
RNF43-202ENST00000577625 PPP1R3CQ9UQK1 317 aa11.41□□□□□ -0.58
RNF43-202ENST00000577625 RBM7Q9Y580 266 aaKnown RBP11.41□□□□□ -0.58
RNF43-202ENST00000577625 PIGBOS1A0A0B4J2F0 54 aa11.4□□□□□ -0.58
RNF43-202ENST00000577625 IGHV2-70DA0A0C4DH43 119 aa11.4□□□□□ -0.58
RNF43-202ENST00000577625 TMEM238C9JI98 176 aa11.4□□□□□ -0.58
RNF43-202ENST00000577625 TNFRSF1AP19438 455 aa11.4□□□□□ -0.58
RNF43-202ENST00000577625 OR5T1Q8NG75 326 aa11.4□□□□□ -0.58
RNF43-202ENST00000577625 MANBALQ9NQG1 85 aa11.4□□□□□ -0.58
RNF43-202ENST00000577625 UQCR10Q9UDW1 63 aa11.4□□□□□ -0.58
RNF43-202ENST00000577625 LAMTOR2Q9Y2Q5 125 aa11.4□□□□□ -0.58
RNF43-202ENST00000577625 PXMP4Q9Y6I8 212 aa11.4□□□□□ -0.58
RNF43-202ENST00000577625 SSSCA1O60232 199 aa11.4□□□□□ -0.59
RNF43-202ENST00000577625 MMP23AO75900 390 aa11.4□□□□□ -0.59
RNF43-202ENST00000577625 CST7O76096 145 aa11.4□□□□□ -0.59
RNF43-202ENST00000577625 PLAUP00749 431 aa11.4□□□□□ -0.59
RNF43-202ENST00000577625 VDAC1P21796 283 aa11.4□□□□□ -0.59
RNF43-202ENST00000577625 EDDM3AQ14507 147 aa11.4□□□□□ -0.59
RNF43-202ENST00000577625 ZNRF1Q8ND25 227 aa11.4□□□□□ -0.59
RNF43-202ENST00000577625 VN1R17PQ8TDU5 208 aa11.4□□□□□ -0.59
RNF43-202ENST00000577625 SPIN2AQ99865 258 aa11.4□□□□□ -0.59
RNF43-202ENST00000577625 SPIN2BQ9BPZ2 258 aa11.4□□□□□ -0.59
RNF43-202ENST00000577625 ODAMA1E959 279 aa11.39□□□□□ -0.59
RNF43-202ENST00000577625 F6UZH7 168 aa11.39□□□□□ -0.59
RNF43-202ENST00000577625 C15orf65H3BRN8 121 aa11.39□□□□□ -0.59
RNF43-202ENST00000577625 ESDP10768 282 aa11.39□□□□□ -0.59
RNF43-202ENST00000577625 SSTR5P35346 364 aa11.39□□□□□ -0.59
RNF43-202ENST00000577625 TFF3Q07654 80 aa11.39□□□□□ -0.59
RNF43-202ENST00000577625 CR1LQ2VPA4 569 aa11.39□□□□□ -0.59
RNF43-202ENST00000577625 FBLN7Q53RD9 439 aa11.39□□□□□ -0.59
RNF43-202ENST00000577625 STUMQ69YW2 141 aa11.39□□□□□ -0.59
RNF43-202ENST00000577625 LCN15Q6UWW0 184 aa11.39□□□□□ -0.59
RNF43-202ENST00000577625 ODF3L1Q8IXM7 274 aa11.39□□□□□ -0.59
RNF43-202ENST00000577625 TMEM217Q8N7C4 229 aa11.39□□□□□ -0.59
RNF43-202ENST00000577625 OR52L2PQ8NGH6 319 aa11.39□□□□□ -0.59
RNF43-202ENST00000577625 OR51H1Q8NH63 302 aa11.39□□□□□ -0.59
RNF43-202ENST00000577625 NINJ1Q92982 152 aa11.39□□□□□ -0.59
RNF43-202ENST00000577625 DCTN5Q9BTE1 182 aa11.39□□□□□ -0.59
RNF43-202ENST00000577625 RPRMQ9NS64 109 aa11.39□□□□□ -0.59
RNF43-202ENST00000577625 KCNS2Q9ULS6 477 aa11.39□□□□□ -0.59
RNF43-202ENST00000577625 PPIAL4AQ9Y536 164 aa11.39□□□□□ -0.59
RNF43-202ENST00000577625 SPINT2O43291 252 aa11.38□□□□□ -0.59
RNF43-202ENST00000577625 IFNA5P01569 189 aa11.38□□□□□ -0.59
RNF43-202ENST00000577625 RPL19P84098 196 aaKnown RBP11.38□□□□□ -0.59
RNF43-202ENST00000577625 HTD2P86397 168 aa11.38□□□□□ -0.59
RNF43-202ENST00000577625 NMSQ5H8A3 153 aa11.38□□□□□ -0.59
RNF43-202ENST00000577625 DRAM1Q8N682 238 aa11.38□□□□□ -0.59
RNF43-202ENST00000577625 ZBTB34Q8NCN2 500 aa11.38□□□□□ -0.59
RNF43-202ENST00000577625 SAP30LQ9HAJ7 183 aa11.38□□□□□ -0.59
RNF43-202ENST00000577625 HRNRQ86YZ3 2850 aaPredicted RBP11.38□□□□□ -0.59
RNF43-202ENST00000577625 A0A1B0GUS0 222 aa11.38□□□□□ -0.59
RNF43-202ENST00000577625 TMEM250H0YL14 139 aa11.38□□□□□ -0.59
RNF43-202ENST00000577625 CD33P20138 364 aa11.38□□□□□ -0.59
RNF43-202ENST00000577625 IL3RAP26951 378 aa11.38□□□□□ -0.59
RNF43-202ENST00000577625 APOBEC3AP31941 199 aaPredicted RBP11.38□□□□□ -0.59
RNF43-202ENST00000577625 CDKN1AP38936 164 aa11.38□□□□□ -0.59
RNF43-202ENST00000577625 CTRLP40313 264 aa11.38□□□□□ -0.59
RNF43-202ENST00000577625 RPS20P60866 119 aaKnown RBP11.38□□□□□ -0.59
RNF43-202ENST00000577625 EFNB3Q15768 340 aa11.38□□□□□ -0.59
RNF43-202ENST00000577625 TEX36Q5VZQ5 186 aa11.38□□□□□ -0.59
RNF43-202ENST00000577625 FAM53AQ6NSI3 398 aaPredicted RBP11.38□□□□□ -0.59
RNF43-202ENST00000577625 DUX4L9Q6RFH8 374 aaPredicted RBP11.38□□□□□ -0.59
RNF43-202ENST00000577625 ZNF645Q8N7E2 425 aa11.38□□□□□ -0.59
RNF43-202ENST00000577625 NUDT11Q96G61 164 aa11.38□□□□□ -0.59
RNF43-202ENST00000577625 SERPINE2P07093 398 aa11.37□□□□□ -0.59
RNF43-202ENST00000577625 LOXP28300 417 aaPredicted RBP11.37□□□□□ -0.59
RNF43-202ENST00000577625 HNRNPA3P51991 378 aaKnown RBP11.37□□□□□ -0.59
RNF43-202ENST00000577625 FGF8P55075 233 aaPredicted RBP11.37□□□□□ -0.59
RNF43-202ENST00000577625 MEF2BQ02080 365 aaPredicted RBP11.37□□□□□ -0.59
RNF43-202ENST00000577625 MSMO1Q15800 293 aa11.37□□□□□ -0.59
RNF43-202ENST00000577625 ZNF726P1Q15940 193 aa11.37□□□□□ -0.59
RNF43-202ENST00000577625 GAFA1Q96PS6 74 aa11.37□□□□□ -0.59
RNF43-202ENST00000577625 HSPB9Q9BQS6 159 aa11.37□□□□□ -0.59
RNF43-202ENST00000577625 LIN7CQ9NUP9 197 aaKnown RBP11.37□□□□□ -0.59
RNF43-202ENST00000577625 RPH3ALQ9UNE2 315 aa11.37□□□□□ -0.59
RNF43-202ENST00000577625 TRAV30A0A087WSZ9 112 aa11.37□□□□□ -0.59
RNF43-202ENST00000577625 DEFB108AA8MXU0 73 aa11.37□□□□□ -0.59
RNF43-202ENST00000577625 ADAM20O43506 726 aa11.37□□□□□ -0.59
RNF43-202ENST00000577625 COMPP49747 757 aaPredicted RBP11.37□□□□□ -0.59
RNF43-202ENST00000577625 DEFB108BQ8NET1 73 aa11.37□□□□□ -0.59
RNF43-202ENST00000577625 OR5AU1Q8NGC0 362 aa11.37□□□□□ -0.59
RNF43-202ENST00000577625 DYNLRB1Q9NP97 96 aa11.37□□□□□ -0.59
RNF43-202ENST00000577625 LRRC30A6NM36 301 aa11.36□□□□□ -0.59
RNF43-202ENST00000577625 RNF212BA8MTL3 300 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms