RNA–Protein interactions for RNA: ENST00000577210.5

COPS3-213, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-213ENST00000577210 HIST1H2BCP62807 126 aa1.17□□□□□ -2.22
COPS3-213ENST00000577210 HIST1H3AP68431 136 aa1.17□□□□□ -2.22
COPS3-213ENST00000577210 RPL19P84098 196 aaKnown RBP1.17□□□□□ -2.22
COPS3-213ENST00000577210 H3F3AP84243 136 aa1.17□□□□□ -2.22
COPS3-213ENST00000577210 HIST2H2BEQ16778 126 aa1.17□□□□□ -2.22
COPS3-213ENST00000577210 C12orf74Q32Q52 190 aa1.17□□□□□ -2.22
COPS3-213ENST00000577210 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.17□□□□□ -2.22
COPS3-213ENST00000577210 AADACL3Q5VUY0 350 aa1.17□□□□□ -2.22
COPS3-213ENST00000577210 TMEM42Q69YG0 159 aa1.17□□□□□ -2.22
COPS3-213ENST00000577210 DHRS4L2Q6PKH6 230 aa1.17□□□□□ -2.22
COPS3-213ENST00000577210 AGTRAPQ6RW13 159 aa1.17□□□□□ -2.22
COPS3-213ENST00000577210 OOSP2Q86WS3 158 aa1.17□□□□□ -2.22
COPS3-213ENST00000577210 ZNF676Q8N7Q3 588 aa1.17□□□□□ -2.22
COPS3-213ENST00000577210 OR52L1Q8NGH7 329 aa1.17□□□□□ -2.22
COPS3-213ENST00000577210 MCFD2Q8NI22 146 aa1.17□□□□□ -2.22
COPS3-213ENST00000577210 SMCR5Q8TEV8 140 aa1.17□□□□□ -2.22
COPS3-213ENST00000577210 CT55Q8WUE5 264 aa1.17□□□□□ -2.22
COPS3-213ENST00000577210 ZCCHC13Q8WW36 166 aaKnown RBP1.17□□□□□ -2.22
COPS3-213ENST00000577210 DNAJC9Q8WXX5 260 aa1.17□□□□□ -2.22
COPS3-213ENST00000577210 HIST1H2BHQ93079 126 aa1.17□□□□□ -2.22
COPS3-213ENST00000577210 HIST1H2BNQ99877 126 aa1.17□□□□□ -2.22
COPS3-213ENST00000577210 HIST1H2BMQ99879 126 aa1.17□□□□□ -2.22
COPS3-213ENST00000577210 HOPXQ9BPY8 73 aaPredicted RBP1.17□□□□□ -2.22
COPS3-213ENST00000577210 SELENOSQ9BQE4 189 aa1.17□□□□□ -2.22
COPS3-213ENST00000577210 OR8D2Q9GZM6 311 aa1.17□□□□□ -2.22
COPS3-213ENST00000577210 ARMC1Q9NVT9 282 aa1.17□□□□□ -2.22
COPS3-213ENST00000577210 CYSLTR1Q9Y271 337 aa1.17□□□□□ -2.22
COPS3-213ENST00000577210 TIMM22Q9Y584 194 aa1.17□□□□□ -2.22
COPS3-213ENST00000577210 TMEM56-RWDD3S4R434 201 aa1.17□□□□□ -2.22
COPS3-213ENST00000577210 NUP155O75694 1391 aa1.17□□□□□ -2.22
COPS3-213ENST00000577210 MIA2Q96PC5 1412 aa1.16□□□□□ -2.22
COPS3-213ENST00000577210 TRAV9-1A0A075B6T8 112 aa1.16□□□□□ -2.22
COPS3-213ENST00000577210 TRGV5A0A0B4J1U4 118 aa1.16□□□□□ -2.22
COPS3-213ENST00000577210 TRAV38-1A0A0B4J264 116 aa1.16□□□□□ -2.22
COPS3-213ENST00000577210 A0A1B0GVG6 124 aa1.16□□□□□ -2.22
COPS3-213ENST00000577210 C2orf74A8MZ97 194 aa1.16□□□□□ -2.22
COPS3-213ENST00000577210 C1orf196B1AJZ1 125 aa1.16□□□□□ -2.22
COPS3-213ENST00000577210 CLDN25C9JDP6 229 aa1.16□□□□□ -2.22
COPS3-213ENST00000577210 TMEM238C9JI98 176 aa1.16□□□□□ -2.22
COPS3-213ENST00000577210 E5RI56 91 aa1.16□□□□□ -2.22
COPS3-213ENST00000577210 CREBL2O60519 120 aaPredicted RBP1.16□□□□□ -2.22
COPS3-213ENST00000577210 OR7C1O76099 320 aaPredicted RBP1.16□□□□□ -2.22
COPS3-213ENST00000577210 ATG12O94817 140 aa1.16□□□□□ -2.22
COPS3-213ENST00000577210 IGHV3-7P01780 117 aa1.16□□□□□ -2.22
COPS3-213ENST00000577210 LGALS1P09382 135 aaKnown RBP1.16□□□□□ -2.22
COPS3-213ENST00000577210 CYBAP13498 195 aa1.16□□□□□ -2.22
COPS3-213ENST00000577210 ERP29P30040 261 aaKnown RBP1.16□□□□□ -2.22
COPS3-213ENST00000577210 FUSP35637 526 aaKnown RBP eCLIP1.16□□□□□ -2.22
COPS3-213ENST00000577210 FXYD7P58549 80 aa1.16□□□□□ -2.22
COPS3-213ENST00000577210 TPI1P60174 286 aa1.16□□□□□ -2.22
COPS3-213ENST00000577210 VBP1P61758 197 aa1.16□□□□□ -2.22
COPS3-213ENST00000577210 RHOBP62745 196 aa1.16□□□□□ -2.22
COPS3-213ENST00000577210 MOGQ16653 247 aa1.16□□□□□ -2.22
COPS3-213ENST00000577210 MIAQ16674 131 aa1.16□□□□□ -2.22
COPS3-213ENST00000577210 ARHGAP11BQ3KRB8 267 aa1.16□□□□□ -2.22
COPS3-213ENST00000577210 BPIFA4PQ86YQ2 179 aa1.16□□□□□ -2.22
COPS3-213ENST00000577210 CLVS1Q8IUQ0 354 aaPredicted RBP1.16□□□□□ -2.22
COPS3-213ENST00000577210 OR4X2Q8NGF9 303 aa1.16□□□□□ -2.22
COPS3-213ENST00000577210 SLC25A40Q8TBP6 338 aa1.16□□□□□ -2.22
COPS3-213ENST00000577210 C20orf166-AS1Q96NR2 134 aa1.16□□□□□ -2.22
COPS3-213ENST00000577210 SS18L2Q9UHA2 77 aa1.16□□□□□ -2.22
COPS3-213ENST00000577210 HHLA3Q9XRX5 114 aa1.16□□□□□ -2.22
COPS3-213ENST00000577210 UTP11Q9Y3A2 253 aaKnown RBP1.16□□□□□ -2.22
COPS3-213ENST00000577210 ZSWIM8A7E2V4 1837 aa1.16□□□□□ -2.22
COPS3-213ENST00000577210 RTL1A6NKG5 1358 aa1.16□□□□□ -2.22
COPS3-213ENST00000577210 SEC16AO15027 2179 aa1.15□□□□□ -2.22
COPS3-213ENST00000577210 KDM5BQ9UGL1 1544 aa1.15□□□□□ -2.22
COPS3-213ENST00000577210 LCTP09848 1927 aa1.15□□□□□ -2.22
COPS3-213ENST00000577210 A0A0J9YW62 118 aa1.15□□□□□ -2.23
COPS3-213ENST00000577210 ODF3BA8MYP8 253 aa1.15□□□□□ -2.23
COPS3-213ENST00000577210 TRAPPC2LH3BP13 241 aa1.15□□□□□ -2.23
COPS3-213ENST00000577210 J3QQQ9 107 aa1.15□□□□□ -2.23
COPS3-213ENST00000577210 BANF1O75531 89 aa1.15□□□□□ -2.23
COPS3-213ENST00000577210 CIAO1O76071 339 aa1.15□□□□□ -2.23
COPS3-213ENST00000577210 PRM2P04554 102 aa1.15□□□□□ -2.23
COPS3-213ENST00000577210 SERPINE1P05121 402 aa1.15□□□□□ -2.23
COPS3-213ENST00000577210 RBP1P09455 135 aa1.15□□□□□ -2.23
COPS3-213ENST00000577210 UCHL1P09936 223 aa1.15□□□□□ -2.23
COPS3-213ENST00000577210 SULT1A3P0DMM9 295 aa1.15□□□□□ -2.23
COPS3-213ENST00000577210 SULT1A4P0DMN0 295 aa1.15□□□□□ -2.23
COPS3-213ENST00000577210 CCL5P13501 91 aa1.15□□□□□ -2.23
COPS3-213ENST00000577210 CBR1P16152 277 aa1.15□□□□□ -2.23
COPS3-213ENST00000577210 PEBP1P30086 187 aaKnown RBP1.15□□□□□ -2.23
COPS3-213ENST00000577210 GABRA4P48169 554 aa1.15□□□□□ -2.23
COPS3-213ENST00000577210 TAS2R41P59536 307 aa1.15□□□□□ -2.23
COPS3-213ENST00000577210 RAB14P61106 215 aa1.15□□□□□ -2.23
COPS3-213ENST00000577210 TMEM258P61165 79 aa1.15□□□□□ -2.23
COPS3-213ENST00000577210 RPL26P61254 145 aaKnown RBP1.15□□□□□ -2.23
COPS3-213ENST00000577210 ERHP84090 104 aaKnown RBP1.15□□□□□ -2.23
COPS3-213ENST00000577210 AKR1C1Q04828 323 aa1.15□□□□□ -2.23
COPS3-213ENST00000577210 KRR1Q13601 381 aaKnown RBP1.15□□□□□ -2.23
COPS3-213ENST00000577210 HES1Q14469 280 aa1.15□□□□□ -2.23
COPS3-213ENST00000577210 IAH1Q2TAA2 248 aaPredicted RBP1.15□□□□□ -2.23
COPS3-213ENST00000577210 C9orf64Q5T6V5 341 aa1.15□□□□□ -2.23
COPS3-213ENST00000577210 FAM27BQ5VT28 67 aa1.15□□□□□ -2.23
COPS3-213ENST00000577210 TEX36Q5VZQ5 186 aa1.15□□□□□ -2.23
COPS3-213ENST00000577210 OR5J2Q8NH18 312 aa1.15□□□□□ -2.23
COPS3-213ENST00000577210 GNPDA2Q8TDQ7 276 aa1.15□□□□□ -2.23
COPS3-213ENST00000577210 NEK7Q8TDX7 302 aa1.15□□□□□ -2.23
COPS3-213ENST00000577210 H1FXQ92522 213 aaKnown RBP1.15□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms