RNA–Protein interactions for RNA: ENST00000576241.1

CCDC40-216, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 714 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-216ENST00000576241 OR52B4Q8NGK2 314 aa10.3□□□□□ -0.76
CCDC40-216ENST00000576241 OR5H2Q8NGV7 314 aa10.3□□□□□ -0.76
CCDC40-216ENST00000576241 IL17DQ8TAD2 202 aa10.3□□□□□ -0.76
CCDC40-216ENST00000576241 FAM110AQ9BQ89 295 aa10.3□□□□□ -0.76
CCDC40-216ENST00000576241 ZNF2Q9BSG1 426 aaPredicted RBP10.3□□□□□ -0.76
CCDC40-216ENST00000576241 MLXQ9UH92 298 aa10.3□□□□□ -0.76
CCDC40-216ENST00000576241 SELENOKQ9Y6D0 94 aa10.3□□□□□ -0.76
CCDC40-216ENST00000576241 MARCH11A6NNE9 402 aa10.29□□□□□ -0.76
CCDC40-216ENST00000576241 RLN1P04808 185 aa10.29□□□□□ -0.76
CCDC40-216ENST00000576241 TRAPPC2P0DI81 140 aa10.29□□□□□ -0.76
CCDC40-216ENST00000576241 TRAPPC2BP0DI82 140 aa10.29□□□□□ -0.76
CCDC40-216ENST00000576241 PTBP1P26599 531 aaKnown RBP eCLIP10.29□□□□□ -0.76
CCDC40-216ENST00000576241 RFX2P48378 723 aa10.29□□□□□ -0.76
CCDC40-216ENST00000576241 TAS2R20P59543 309 aa10.29□□□□□ -0.76
CCDC40-216ENST00000576241 PLECQ15149 4684 aaKnown RBP10.29□□□□□ -0.76
CCDC40-216ENST00000576241 PLET1Q6UQ28 207 aa10.29□□□□□ -0.76
CCDC40-216ENST00000576241 DHRS11Q6UWP2 260 aa10.29□□□□□ -0.76
CCDC40-216ENST00000576241 BTNL8Q6UX41 500 aa10.29□□□□□ -0.76
CCDC40-216ENST00000576241 HSD17B13Q7Z5P4 300 aaPredicted RBP10.29□□□□□ -0.76
CCDC40-216ENST00000576241 GDPD1Q8N9F7 314 aa10.29□□□□□ -0.76
CCDC40-216ENST00000576241 TSPAN14Q8NG11 270 aa10.29□□□□□ -0.76
CCDC40-216ENST00000576241 ZNF502Q8TBZ5 544 aa10.29□□□□□ -0.76
CCDC40-216ENST00000576241 MARC2Q969Z3 335 aa10.29□□□□□ -0.76
CCDC40-216ENST00000576241 MOB3AQ96BX8 217 aa10.29□□□□□ -0.76
CCDC40-216ENST00000576241 UFC1Q9Y3C8 167 aa10.29□□□□□ -0.76
CCDC40-216ENST00000576241 KIAA1109Q2LD37 5005 aa10.28□□□□□ -0.76
CCDC40-216ENST00000576241 PGLYRP1O75594 196 aaPredicted RBP10.28□□□□□ -0.76
CCDC40-216ENST00000576241 SNAPC5O75971 98 aa10.28□□□□□ -0.76
CCDC40-216ENST00000576241 SCAF4O95104 1147 aaKnown RBP10.28□□□□□ -0.76
CCDC40-216ENST00000576241 PMP2P02689 132 aa10.28□□□□□ -0.76
CCDC40-216ENST00000576241 OR13C7P0DN81 318 aa10.28□□□□□ -0.76
CCDC40-216ENST00000576241 F2RP25116 425 aa10.28□□□□□ -0.76
CCDC40-216ENST00000576241 TGFBR1P36897 503 aa10.28□□□□□ -0.76
CCDC40-216ENST00000576241 RPS19P39019 145 aaKnown RBP10.28□□□□□ -0.76
CCDC40-216ENST00000576241 LSM3P62310 102 aaKnown RBP10.28□□□□□ -0.76
CCDC40-216ENST00000576241 TM4SF20Q53R12 229 aa10.28□□□□□ -0.76
CCDC40-216ENST00000576241 UNQ9165/PRO28630Q6UXU0 137 aa10.28□□□□□ -0.76
CCDC40-216ENST00000576241 RBPMS2Q6ZRY4 209 aaKnown RBP10.28□□□□□ -0.76
CCDC40-216ENST00000576241 OR10W1Q8NGF6 305 aa10.28□□□□□ -0.76
CCDC40-216ENST00000576241 OR1L8Q8NGR8 309 aa10.28□□□□□ -0.76
CCDC40-216ENST00000576241 OR6F1Q8NGZ6 308 aa10.28□□□□□ -0.76
CCDC40-216ENST00000576241 VN1R17PQ8TDU5 208 aa10.28□□□□□ -0.76
CCDC40-216ENST00000576241 ANAPC10Q9UM13 185 aa10.28□□□□□ -0.76
CCDC40-216ENST00000576241 A0A087WXM4 84 aa10.27□□□□□ -0.77
CCDC40-216ENST00000576241 TRAV25A0A0B4J276 109 aa10.27□□□□□ -0.77
CCDC40-216ENST00000576241 IGHV3-35A0A0C4DH35 117 aa10.27□□□□□ -0.77
CCDC40-216ENST00000576241 TEX50A0A1B0GTY4 177 aa10.27□□□□□ -0.77
CCDC40-216ENST00000576241 KRASP01116 189 aa10.27□□□□□ -0.77
CCDC40-216ENST00000576241 SERPINE2P07093 398 aa10.27□□□□□ -0.77
CCDC40-216ENST00000576241 S100GP29377 79 aa10.27□□□□□ -0.77
CCDC40-216ENST00000576241 PRSS3P35030 304 aa10.27□□□□□ -0.77
CCDC40-216ENST00000576241 ELLP55199 621 aaPredicted RBP10.27□□□□□ -0.77
CCDC40-216ENST00000576241 ZNF585BQ52M93 769 aa10.27□□□□□ -0.77
CCDC40-216ENST00000576241 SLC25A24Q6NUK1 477 aa10.27□□□□□ -0.77
CCDC40-216ENST00000576241 LSM10Q969L4 123 aaKnown RBP10.27□□□□□ -0.77
CCDC40-216ENST00000576241 DGCR14Q96DF8 476 aaKnown RBP10.27□□□□□ -0.77
CCDC40-216ENST00000576241 YIPF6Q96EC8 236 aa10.27□□□□□ -0.77
CCDC40-216ENST00000576241 HINT2Q9BX68 163 aa10.27□□□□□ -0.77
CCDC40-216ENST00000576241 MRPL27Q9P0M9 148 aaKnown RBP10.27□□□□□ -0.77
CCDC40-216ENST00000576241 GPR31O00270 319 aa10.26□□□□□ -0.77
CCDC40-216ENST00000576241 TGOLN2O43493 480 aa10.26□□□□□ -0.77
CCDC40-216ENST00000576241 NAT1P18440 290 aa10.26□□□□□ -0.77
CCDC40-216ENST00000576241 HRH1P35367 487 aa10.26□□□□□ -0.77
CCDC40-216ENST00000576241 LPAR6P43657 344 aa10.26□□□□□ -0.77
CCDC40-216ENST00000576241 WT1-ASQ06250 92 aa10.26□□□□□ -0.77
CCDC40-216ENST00000576241 OR1L6Q8NGR2 347 aa10.26□□□□□ -0.77
CCDC40-216ENST00000576241 FCAMRQ8WWV6 532 aa10.26□□□□□ -0.77
CCDC40-216ENST00000576241 BSCL2Q96G97 398 aaPredicted RBP10.26□□□□□ -0.77
CCDC40-216ENST00000576241 GGTLC1Q9BX51 225 aa10.26□□□□□ -0.77
CCDC40-216ENST00000576241 PRNDQ9UKY0 176 aa10.26□□□□□ -0.77
CCDC40-216ENST00000576241 OR51B2Q9Y5P1 312 aa10.26□□□□□ -0.77
CCDC40-216ENST00000576241 SMIM31A0A1B0GVY4 71 aa10.25□□□□□ -0.77
CCDC40-216ENST00000576241 OR2T8A6NH00 312 aa10.25□□□□□ -0.77
CCDC40-216ENST00000576241 TNFAIP8O95379 198 aa10.25□□□□□ -0.77
CCDC40-216ENST00000576241 C8orf88P0DMB2 117 aa10.25□□□□□ -0.77
CCDC40-216ENST00000576241 HLA-DMAP28067 261 aa10.25□□□□□ -0.77
CCDC40-216ENST00000576241 G6PCP35575 357 aa10.25□□□□□ -0.77
CCDC40-216ENST00000576241 TSPAN5P62079 268 aa10.25□□□□□ -0.77
CCDC40-216ENST00000576241 LPCAT3Q6P1A2 487 aa10.25□□□□□ -0.77
CCDC40-216ENST00000576241 SPSB3Q6PJ21 355 aa10.25□□□□□ -0.77
CCDC40-216ENST00000576241 SLC38A6Q8IZM9 456 aa10.25□□□□□ -0.77
CCDC40-216ENST00000576241 CADM3Q8N126 398 aa10.25□□□□□ -0.77
CCDC40-216ENST00000576241 OR5B3Q8NH48 314 aa10.25□□□□□ -0.77
CCDC40-216ENST00000576241 TMEM190Q8WZ59 177 aa10.25□□□□□ -0.77
CCDC40-216ENST00000576241 SLC25A46Q96AG3 418 aa10.25□□□□□ -0.77
CCDC40-216ENST00000576241 TMEM56Q96MV1 263 aa10.25□□□□□ -0.77
CCDC40-216ENST00000576241 TSC22D3Q99576 134 aa10.25□□□□□ -0.77
CCDC40-216ENST00000576241 ZNF436Q9C0F3 470 aaPredicted RBP10.25□□□□□ -0.77
CCDC40-216ENST00000576241 FXYD6Q9H0Q3 95 aa10.25□□□□□ -0.77
CCDC40-216ENST00000576241 DAZ1Q9NQZ3 744 aaKnown RBP10.25□□□□□ -0.77
CCDC40-216ENST00000576241 NDUFA4L2Q9NRX3 87 aa10.25□□□□□ -0.77
CCDC40-216ENST00000576241 FKBP11Q9NYL4 201 aa10.25□□□□□ -0.77
CCDC40-216ENST00000576241 NSG2Q9Y328 171 aa10.25□□□□□ -0.77
CCDC40-216ENST00000576241 F11RQ9Y624 299 aaKnown RBP10.25□□□□□ -0.77
CCDC40-216ENST00000576241 LOC102724200A0A096LPH7 203 aaPredicted RBP10.24□□□□□ -0.77
CCDC40-216ENST00000576241 EIF4EP06730 217 aaKnown RBP10.24□□□□□ -0.77
CCDC40-216ENST00000576241 PHLDA2Q53GA4 152 aa10.24□□□□□ -0.77
CCDC40-216ENST00000576241 OR2C3Q8N628 320 aa10.24□□□□□ -0.77
CCDC40-216ENST00000576241 UBAC2Q8NBM4 344 aa10.24□□□□□ -0.77
CCDC40-216ENST00000576241 ATP6V0BQ99437 205 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms