RNA–Protein interactions for RNA: ENST00000576218.5

SMG6-220, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 902 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-220ENST00000576218 PYDC2Q56P42 97 aa11.73□□□□□ -0.53
SMG6-220ENST00000576218 ACSM6Q6P461 480 aa11.73□□□□□ -0.53
SMG6-220ENST00000576218 HSD17B13Q7Z5P4 300 aaPredicted RBP11.73□□□□□ -0.53
SMG6-220ENST00000576218 LHFPL1Q86WI0 220 aa11.73□□□□□ -0.53
SMG6-220ENST00000576218 OR13C8Q8NGS7 320 aa11.73□□□□□ -0.53
SMG6-220ENST00000576218 MARCH1Q8TCQ1 289 aa11.73□□□□□ -0.53
SMG6-220ENST00000576218 LSM10Q969L4 123 aaKnown RBP11.73□□□□□ -0.53
SMG6-220ENST00000576218 MRGPRFQ96AM1 343 aa11.73□□□□□ -0.53
SMG6-220ENST00000576218 TMEM56Q96MV1 263 aa11.73□□□□□ -0.53
SMG6-220ENST00000576218 PRRT1Q99946 306 aa11.73□□□□□ -0.53
SMG6-220ENST00000576218 SRSF8Q9BRL6 282 aaKnown RBP11.73□□□□□ -0.53
SMG6-220ENST00000576218 MCUBQ9NWR8 336 aa11.73□□□□□ -0.53
SMG6-220ENST00000576218 TGP01266 2768 aa11.72□□□□□ -0.53
SMG6-220ENST00000576218 TEX13DA0A0J9YY54 714 aaPredicted RBP11.72□□□□□ -0.53
SMG6-220ENST00000576218 C3orf85A0A1B0GTC6 90 aa11.72□□□□□ -0.53
SMG6-220ENST00000576218 A0A1B0GW64 132 aa11.72□□□□□ -0.53
SMG6-220ENST00000576218 H0Y980 276 aa11.72□□□□□ -0.53
SMG6-220ENST00000576218 TRBV12-3P01733 135 aa11.72□□□□□ -0.53
SMG6-220ENST00000576218 IGHV3-23P01764 117 aa11.72□□□□□ -0.53
SMG6-220ENST00000576218 FGF2P09038 288 aa11.72□□□□□ -0.53
SMG6-220ENST00000576218 OR13C7P0DN81 318 aa11.72□□□□□ -0.53
SMG6-220ENST00000576218 CTRB1P17538 263 aa11.72□□□□□ -0.53
SMG6-220ENST00000576218 RND3P61587 244 aa11.72□□□□□ -0.53
SMG6-220ENST00000576218 CTRB2Q6GPI1 263 aa11.72□□□□□ -0.53
SMG6-220ENST00000576218 OR4C16Q8NGL9 310 aa11.72□□□□□ -0.53
SMG6-220ENST00000576218 PEMTQ9UBM1 199 aa11.72□□□□□ -0.53
SMG6-220ENST00000576218 SCP2D1Q9UJQ7 156 aa11.72□□□□□ -0.53
SMG6-220ENST00000576218 S4R3C0 116 aa11.72□□□□□ -0.53
SMG6-220ENST00000576218 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.71□□□□□ -0.53
SMG6-220ENST00000576218 TEX50A0A1B0GTY4 177 aa11.71□□□□□ -0.53
SMG6-220ENST00000576218 GSTZ1O43708 216 aaPredicted RBP11.71□□□□□ -0.53
SMG6-220ENST00000576218 CRYGCP07315 174 aa11.71□□□□□ -0.53
SMG6-220ENST00000576218 FAUP35544 74 aaKnown RBP11.71□□□□□ -0.53
SMG6-220ENST00000576218 ARL3P36405 182 aa11.71□□□□□ -0.53
SMG6-220ENST00000576218 CD69Q07108 199 aa11.71□□□□□ -0.53
SMG6-220ENST00000576218 OR10W1Q8NGF6 305 aa11.71□□□□□ -0.53
SMG6-220ENST00000576218 OR9G4Q8NGQ1 327 aa11.71□□□□□ -0.53
SMG6-220ENST00000576218 OR5B3Q8NH48 314 aa11.71□□□□□ -0.53
SMG6-220ENST00000576218 CXorf58Q96LI9 332 aa11.71□□□□□ -0.53
SMG6-220ENST00000576218 PDCD10Q9BUL8 212 aa11.71□□□□□ -0.53
SMG6-220ENST00000576218 IGLC7A0M8Q6 106 aa11.7□□□□□ -0.54
SMG6-220ENST00000576218 CGB1A6NKQ9 187 aa11.7□□□□□ -0.54
SMG6-220ENST00000576218 C15orf61A6NNL5 157 aa11.7□□□□□ -0.54
SMG6-220ENST00000576218 PPP5D1E7EU14 171 aa11.7□□□□□ -0.54
SMG6-220ENST00000576218 NDUFB8O95169 186 aa11.7□□□□□ -0.54
SMG6-220ENST00000576218 CTSDP07339 412 aaPredicted RBP11.7□□□□□ -0.54
SMG6-220ENST00000576218 AP3S2P59780 193 aa11.7□□□□□ -0.54
SMG6-220ENST00000576218 KLF5Q13887 457 aaPredicted RBP11.7□□□□□ -0.54
SMG6-220ENST00000576218 SLC25A24Q6NUK1 477 aa11.7□□□□□ -0.54
SMG6-220ENST00000576218 CLEC19AQ6UXS0 136 aa11.7□□□□□ -0.54
SMG6-220ENST00000576218 GDPD1Q8N9F7 314 aa11.7□□□□□ -0.54
SMG6-220ENST00000576218 OR51S1Q8NGJ8 323 aa11.7□□□□□ -0.54
SMG6-220ENST00000576218 RRNAD1Q96FB5 475 aaKnown RBP11.7□□□□□ -0.54
SMG6-220ENST00000576218 SEC22AQ96IW7 307 aa11.7□□□□□ -0.54
SMG6-220ENST00000576218 TP53RKQ96S44 253 aa11.7□□□□□ -0.54
SMG6-220ENST00000576218 THAP7Q9BT49 309 aaPredicted RBP11.7□□□□□ -0.54
SMG6-220ENST00000576218 NXF2Q9GZY0 626 aaKnown RBP11.7□□□□□ -0.54
SMG6-220ENST00000576218 ANKRD20A5PA0PJZ0 165 aa11.69□□□□□ -0.54
SMG6-220ENST00000576218 ZNF701M0R085 212 aaPredicted RBP11.69□□□□□ -0.54
SMG6-220ENST00000576218 BMPR1BO00238 502 aa11.69□□□□□ -0.54
SMG6-220ENST00000576218 GGCTO75223 188 aaKnown RBP11.69□□□□□ -0.54
SMG6-220ENST00000576218 B3GALNT1O75752 331 aa11.69□□□□□ -0.54
SMG6-220ENST00000576218 PTBP1P26599 531 aaKnown RBP eCLIP11.69□□□□□ -0.54
SMG6-220ENST00000576218 INPP1P49441 399 aa11.69□□□□□ -0.54
SMG6-220ENST00000576218 SURF2Q15527 256 aaPredicted RBP11.69□□□□□ -0.54
SMG6-220ENST00000576218 SP6Q3SY56 376 aa11.69□□□□□ -0.54
SMG6-220ENST00000576218 SPANXN2Q5MJ10 180 aa11.69□□□□□ -0.54
SMG6-220ENST00000576218 HAPLN4Q86UW8 402 aa11.69□□□□□ -0.54
SMG6-220ENST00000576218 TOMM5Q8N4H5 51 aa11.69□□□□□ -0.54
SMG6-220ENST00000576218 SCGB3A2Q96PL1 93 aa11.69□□□□□ -0.54
SMG6-220ENST00000576218 FANCD2OSQ96PS1 177 aa11.69□□□□□ -0.54
SMG6-220ENST00000576218 NDUFA4L2Q9NRX3 87 aa11.69□□□□□ -0.54
SMG6-220ENST00000576218 IGLV11-55A0A075B6I3 123 aa11.68□□□□□ -0.54
SMG6-220ENST00000576218 TRBV7-1A0A0A6YYK4 115 aa11.68□□□□□ -0.54
SMG6-220ENST00000576218 SPNP16150 400 aa11.68□□□□□ -0.54
SMG6-220ENST00000576218 WT1-ASQ06250 92 aa11.68□□□□□ -0.54
SMG6-220ENST00000576218 CADM3Q8N126 398 aa11.68□□□□□ -0.54
SMG6-220ENST00000576218 Q8N402 240 aa11.68□□□□□ -0.54
SMG6-220ENST00000576218 SLC35G3Q8N808 338 aa11.68□□□□□ -0.54
SMG6-220ENST00000576218 DYNLRB2Q8TF09 96 aa11.68□□□□□ -0.54
SMG6-220ENST00000576218 RBM38Q9H0Z9 239 aaKnown RBP11.68□□□□□ -0.54
SMG6-220ENST00000576218 PLEKHA3Q9HB20 300 aa11.68□□□□□ -0.54
SMG6-220ENST00000576218 ENY2Q9NPA8 101 aa11.68□□□□□ -0.54
SMG6-220ENST00000576218 TMEM14BQ9NUH8 114 aa11.68□□□□□ -0.54
SMG6-220ENST00000576218 ZNF320A2RRD8 509 aa11.67□□□□□ -0.54
SMG6-220ENST00000576218 MFSD2BA6NFX1 497 aa11.67□□□□□ -0.54
SMG6-220ENST00000576218 IFNA17P01571 189 aa11.67□□□□□ -0.54
SMG6-220ENST00000576218 IGKV1-39P01597 117 aa11.67□□□□□ -0.54
SMG6-220ENST00000576218 HLA-AP01891 365 aaKnown RBP11.67□□□□□ -0.54
SMG6-220ENST00000576218 IGKV1D-39P04432 117 aa11.67□□□□□ -0.54
SMG6-220ENST00000576218 OR5AC1P0C628 307 aa11.67□□□□□ -0.54
SMG6-220ENST00000576218 GP9P14770 177 aa11.67□□□□□ -0.54
SMG6-220ENST00000576218 GPR183P32249 361 aa11.67□□□□□ -0.54
SMG6-220ENST00000576218 FAM106AQ4KMX7 169 aa11.67□□□□□ -0.54
SMG6-220ENST00000576218 SGPP2Q8IWX5 399 aa11.67□□□□□ -0.54
SMG6-220ENST00000576218 OR1L6Q8NGR2 347 aa11.67□□□□□ -0.54
SMG6-220ENST00000576218 NAA60Q9H7X0 242 aa11.67□□□□□ -0.54
SMG6-220ENST00000576218 ZC4H2Q9NQZ6 224 aa11.67□□□□□ -0.54
SMG6-220ENST00000576218 F11RQ9Y624 299 aaKnown RBP11.67□□□□□ -0.54
SMG6-220ENST00000576218 OR2C1O95371 312 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms