RNA–Protein interactions for RNA: ENST00000575909.1

TOM1L1-222, Transcript of target of myb1 like 1 membrane trafficking protein, human

TSL 3

Gene TOM1L1, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TOM1L1-222	ENST00000575909	KCNRG	Q8N5I3	272 aa		4.25	□□□□□ -1.73
TOM1L1-222	ENST00000575909	OR4B1	Q8NGF8	309 aa		4.25	□□□□□ -1.73
TOM1L1-222	ENST00000575909	DYNLL2	Q96FJ2	89 aa		4.25	□□□□□ -1.73
TOM1L1-222	ENST00000575909	PEBP4	Q96S96	227 aa		4.25	□□□□□ -1.73
TOM1L1-222	ENST00000575909	IMMP2L	Q96T52	175 aa		4.25	□□□□□ -1.73
TOM1L1-222	ENST00000575909	PKMYT1	Q99640	499 aa		4.25	□□□□□ -1.73
TOM1L1-222	ENST00000575909	TCEAL2	Q9H3H9	227 aa	Predicted RBP	4.25	□□□□□ -1.73
TOM1L1-222	ENST00000575909	POMK	Q9H5K3	350 aa		4.25	□□□□□ -1.73
TOM1L1-222	ENST00000575909	RNF11	Q9Y3C5	154 aa		4.25	□□□□□ -1.73
TOM1L1-222	ENST00000575909	MED31	Q9Y3C7	131 aa		4.25	□□□□□ -1.73
TOM1L1-222	ENST00000575909	F11R	Q9Y624	299 aa	Known RBP	4.25	□□□□□ -1.73
TOM1L1-222	ENST00000575909		A0A1B0GUL6	1792 aa		4.25	□□□□□ -1.73
TOM1L1-222	ENST00000575909	ABCA5	Q8WWZ7	1642 aa		4.24	□□□□□ -1.73
TOM1L1-222	ENST00000575909	ERVK-7	P63135	1459 aa		4.24	□□□□□ -1.73
TOM1L1-222	ENST00000575909	RPRD2	Q5VT52	1461 aa	Known RBP	4.24	□□□□□ -1.73
TOM1L1-222	ENST00000575909	ANKRD26	Q9UPS8	1709 aa		4.24	□□□□□ -1.73
TOM1L1-222	ENST00000575909	DIP2A	Q14689	1571 aa		4.24	□□□□□ -1.73
TOM1L1-222	ENST00000575909		A0A0D9SG52	128 aa		4.24	□□□□□ -1.73
TOM1L1-222	ENST00000575909	LOC100130705	A0A1B0GUX0	176 aa		4.24	□□□□□ -1.73
TOM1L1-222	ENST00000575909	MYBPHL	A2RUH7	354 aa		4.24	□□□□□ -1.73
TOM1L1-222	ENST00000575909		A8MU10	97 aa		4.24	□□□□□ -1.73
TOM1L1-222	ENST00000575909		B4DEV8	164 aa		4.24	□□□□□ -1.73
TOM1L1-222	ENST00000575909	GGTLC3	B5MD39	225 aa		4.24	□□□□□ -1.73
TOM1L1-222	ENST00000575909	TMEM262	E9PQX1	116 aa		4.24	□□□□□ -1.73
TOM1L1-222	ENST00000575909	SMKR1	H3BMG3	65 aa		4.24	□□□□□ -1.73
TOM1L1-222	ENST00000575909	OVOL1	O14753	267 aa		4.24	□□□□□ -1.73
TOM1L1-222	ENST00000575909	NPFF	O15130	113 aa		4.24	□□□□□ -1.73
TOM1L1-222	ENST00000575909	CA2	P00918	260 aa		4.24	□□□□□ -1.73
TOM1L1-222	ENST00000575909	OXT	P01178	125 aa		4.24	□□□□□ -1.73
TOM1L1-222	ENST00000575909	BGLAP	P02818	100 aa		4.24	□□□□□ -1.73
TOM1L1-222	ENST00000575909	SPINK8	P0C7L1	97 aa		4.24	□□□□□ -1.73
TOM1L1-222	ENST00000575909	ZNF728	P0DKX0	622 aa		4.24	□□□□□ -1.73
TOM1L1-222	ENST00000575909	BCL2	P10415	239 aa		4.24	□□□□□ -1.73
TOM1L1-222	ENST00000575909	FABP4	P15090	132 aa		4.24	□□□□□ -1.73
TOM1L1-222	ENST00000575909	CRYBB3	P26998	211 aa		4.24	□□□□□ -1.73
TOM1L1-222	ENST00000575909	TSPO	P30536	169 aa		4.24	□□□□□ -1.73
TOM1L1-222	ENST00000575909	GALR1	P47211	349 aa		4.24	□□□□□ -1.73
TOM1L1-222	ENST00000575909	FABP6	P51161	128 aa		4.24	□□□□□ -1.73
TOM1L1-222	ENST00000575909	H2BFS	P57053	126 aa		4.24	□□□□□ -1.73
TOM1L1-222	ENST00000575909	AKR1C1	Q04828	323 aa		4.24	□□□□□ -1.73
TOM1L1-222	ENST00000575909	LAMTOR4	Q0VGL1	99 aa		4.24	□□□□□ -1.73
TOM1L1-222	ENST00000575909	TMEM255A	Q5JRV8	349 aa		4.24	□□□□□ -1.73
TOM1L1-222	ENST00000575909	MEIG1	Q5JSS6	88 aa		4.24	□□□□□ -1.73
TOM1L1-222	ENST00000575909	OR2T5	Q6IEZ7	315 aa		4.24	□□□□□ -1.73
TOM1L1-222	ENST00000575909	ALKAL2	Q6UX46	152 aa		4.24	□□□□□ -1.73
TOM1L1-222	ENST00000575909	LINC00173	Q6ZV60	143 aa		4.24	□□□□□ -1.73
TOM1L1-222	ENST00000575909	SSX8	Q7RTT4	187 aa		4.24	□□□□□ -1.73
TOM1L1-222	ENST00000575909	TCF23	Q7RTU1	214 aa		4.24	□□□□□ -1.73
TOM1L1-222	ENST00000575909	ZNF550	Q7Z398	422 aa		4.24	□□□□□ -1.73
TOM1L1-222	ENST00000575909	ZFP62	Q8NB50	900 aa	Predicted RBP	4.24	□□□□□ -1.73
TOM1L1-222	ENST00000575909	OR2T29	Q8NH02	315 aa		4.24	□□□□□ -1.73
TOM1L1-222	ENST00000575909	EEF1AKMT3	Q96AZ1	226 aa		4.24	□□□□□ -1.73
TOM1L1-222	ENST00000575909	CLDN23	Q96B33	292 aa		4.24	□□□□□ -1.73
TOM1L1-222	ENST00000575909	HIST1H2BL	Q99880	126 aa		4.24	□□□□□ -1.73
TOM1L1-222	ENST00000575909	RTBDN	Q9BSG5	229 aa	Predicted RBP	4.24	□□□□□ -1.73
TOM1L1-222	ENST00000575909	SLIRP	Q9GZT3	109 aa	Known RBP	4.24	□□□□□ -1.73
TOM1L1-222	ENST00000575909	TMEM222	Q9H0R3	208 aa		4.24	□□□□□ -1.73
TOM1L1-222	ENST00000575909	FKBP11	Q9NYL4	201 aa		4.24	□□□□□ -1.73
TOM1L1-222	ENST00000575909	PKIG	Q9Y2B9	76 aa		4.24	□□□□□ -1.73
TOM1L1-222	ENST00000575909	MPC1	Q9Y5U8	109 aa		4.24	□□□□□ -1.73
TOM1L1-222	ENST00000575909	ABCC3	O15438	1527 aa		4.24	□□□□□ -1.73
TOM1L1-222	ENST00000575909	MYH6	P13533	1939 aa		4.23	□□□□□ -1.73
TOM1L1-222	ENST00000575909	MYH2	Q9UKX2	1941 aa		4.23	□□□□□ -1.73
TOM1L1-222	ENST00000575909	DHRS12	A0PJE2	317 aa		4.23	□□□□□ -1.73
TOM1L1-222	ENST00000575909	ZNF850	A8MQ14	1090 aa		4.23	□□□□□ -1.73
TOM1L1-222	ENST00000575909	RER1	O15258	196 aa		4.23	□□□□□ -1.73
TOM1L1-222	ENST00000575909	CD5L	O43866	347 aa		4.23	□□□□□ -1.73
TOM1L1-222	ENST00000575909	ZNF682	O95780	498 aa		4.23	□□□□□ -1.73
TOM1L1-222	ENST00000575909	CTSE	P14091	401 aa		4.23	□□□□□ -1.73
TOM1L1-222	ENST00000575909	ZNF708	P17019	499 aa		4.23	□□□□□ -1.73
TOM1L1-222	ENST00000575909	KLRD1	Q13241	179 aa		4.23	□□□□□ -1.73
TOM1L1-222	ENST00000575909	TTC32	Q5I0X7	151 aa		4.23	□□□□□ -1.73
TOM1L1-222	ENST00000575909	FAM201A	Q5SY85	155 aa		4.23	□□□□□ -1.73
TOM1L1-222	ENST00000575909	LCE3C	Q5T5A8	94 aa		4.23	□□□□□ -1.73
TOM1L1-222	ENST00000575909	EPGN	Q6UW88	154 aa		4.23	□□□□□ -1.73
TOM1L1-222	ENST00000575909	AMTN	Q6UX39	209 aa		4.23	□□□□□ -1.73
TOM1L1-222	ENST00000575909	ALKAL1	Q6UXT8	129 aa		4.23	□□□□□ -1.73
TOM1L1-222	ENST00000575909	SLC25A26	Q70HW3	274 aa		4.23	□□□□□ -1.73
TOM1L1-222	ENST00000575909	OR2A1	Q8NGT9	310 aa		4.23	□□□□□ -1.73
TOM1L1-222	ENST00000575909	OR10G6	Q8NH81	332 aa		4.23	□□□□□ -1.73
TOM1L1-222	ENST00000575909	C10orf82	Q8WW14	230 aa		4.23	□□□□□ -1.73
TOM1L1-222	ENST00000575909	POP5	Q969H6	163 aa	Known RBP	4.23	□□□□□ -1.73
TOM1L1-222	ENST00000575909	FMC1	Q96HJ9	113 aa		4.23	□□□□□ -1.73
TOM1L1-222	ENST00000575909	EMC6	Q9BV81	110 aa		4.23	□□□□□ -1.73
TOM1L1-222	ENST00000575909	WDR61	Q9GZS3	305 aa	Known RBP	4.23	□□□□□ -1.73
TOM1L1-222	ENST00000575909	DUSP21	Q9H596	190 aa		4.23	□□□□□ -1.73
TOM1L1-222	ENST00000575909	PARP11	Q9NR21	331 aa		4.23	□□□□□ -1.73
TOM1L1-222	ENST00000575909	ASF1B	Q9NVP2	202 aa		4.23	□□□□□ -1.73
TOM1L1-222	ENST00000575909	DEC1	Q9P2X7	70 aa		4.23	□□□□□ -1.73
TOM1L1-222	ENST00000575909	ZNF106	Q9H2Y7	1883 aa	Known RBP	4.23	□□□□□ -1.73
TOM1L1-222	ENST00000575909	LAMC1	P11047	1609 aa		4.23	□□□□□ -1.73
TOM1L1-222	ENST00000575909	ADAMTS9	Q9P2N4	1935 aa		4.23	□□□□□ -1.73
TOM1L1-222	ENST00000575909	BLM	P54132	1417 aa	Predicted RBP	4.22	□□□□□ -1.73
TOM1L1-222	ENST00000575909	TMED7-TICAM2	A0A0A6YYA0	188 aa		4.22	□□□□□ -1.73
TOM1L1-222	ENST00000575909		A0A1B0GVY2	172 aa		4.22	□□□□□ -1.73
TOM1L1-222	ENST00000575909		A0A1B0GW64	132 aa		4.22	□□□□□ -1.73
TOM1L1-222	ENST00000575909	C7orf71	A4D174	169 aa		4.22	□□□□□ -1.73
TOM1L1-222	ENST00000575909	BTNL10	A8MVZ5	291 aa		4.22	□□□□□ -1.73
TOM1L1-222	ENST00000575909	FNDC10	F2Z333	226 aa		4.22	□□□□□ -1.73
TOM1L1-222	ENST00000575909		H3BQ15	152 aa		4.22	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms