RNA–Protein interactions for RNA: ENST00000574867.5

NUP88-210, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 2,081 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-210ENST00000574867 MRPL41Q8IXM3 137 aaKnown RBP13.41□□□□□ -0.26
NUP88-210ENST00000574867 C7orf66A4D0T2 115 aa13.41□□□□□ -0.26
NUP88-210ENST00000574867 E7EUB6 86 aa13.41□□□□□ -0.26
NUP88-210ENST00000574867 ST8SIA3O43173 380 aa13.41□□□□□ -0.26
NUP88-210ENST00000574867 ADAP1O75689 374 aa13.41□□□□□ -0.26
NUP88-210ENST00000574867 PPIFP30405 207 aaKnown RBP13.41□□□□□ -0.26
NUP88-210ENST00000574867 PRCDQ00LT1 54 aa13.41□□□□□ -0.26
NUP88-210ENST00000574867 OR5M8Q8NGP6 311 aa13.41□□□□□ -0.26
NUP88-210ENST00000574867 OR52E5Q8NH55 327 aa13.41□□□□□ -0.26
NUP88-210ENST00000574867 A0A1B0GW64 132 aa13.4□□□□□ -0.26
NUP88-210ENST00000574867 CGB1A6NKQ9 187 aa13.4□□□□□ -0.26
NUP88-210ENST00000574867 IGHG4P01861 327 aa13.4□□□□□ -0.26
NUP88-210ENST00000574867 ASPHD1Q5U4P2 390 aa13.4□□□□□ -0.26
NUP88-210ENST00000574867 TEX38Q6PEX7 206 aa13.4□□□□□ -0.26
NUP88-210ENST00000574867 UXS1Q8NBZ7 420 aa13.4□□□□□ -0.26
NUP88-210ENST00000574867 OR5AU1Q8NGC0 362 aa13.4□□□□□ -0.26
NUP88-210ENST00000574867 OR4X2Q8NGF9 303 aa13.4□□□□□ -0.26
NUP88-210ENST00000574867 TET2Q6N021 2002 aaPredicted RBP13.4□□□□□ -0.26
NUP88-210ENST00000574867 A0A1W2PN81 502 aa13.4□□□□□ -0.27
NUP88-210ENST00000574867 IFNA17P01571 189 aa13.4□□□□□ -0.27
NUP88-210ENST00000574867 CHRNA7P36544 502 aa13.4□□□□□ -0.27
NUP88-210ENST00000574867 PDLIM3Q53GG5 364 aaPredicted RBP13.4□□□□□ -0.27
NUP88-210ENST00000574867 C12orf54Q6X4T0 127 aa13.4□□□□□ -0.27
NUP88-210ENST00000574867 ZNF329Q86UD4 541 aa13.4□□□□□ -0.27
NUP88-210ENST00000574867 OR1S1Q8NH92 325 aa13.4□□□□□ -0.27
NUP88-210ENST00000574867 FAM110DQ8TAY7 271 aaPredicted RBP13.4□□□□□ -0.27
NUP88-210ENST00000574867 HINT2Q9BX68 163 aa13.4□□□□□ -0.27
NUP88-210ENST00000574867 IGLC7A0M8Q6 106 aa13.39□□□□□ -0.27
NUP88-210ENST00000574867 HMX3A6NHT5 357 aa13.39□□□□□ -0.27
NUP88-210ENST00000574867 NPIPB5A8MRT5 1133 aa13.39□□□□□ -0.27
NUP88-210ENST00000574867 SPCS3P61009 180 aa13.39□□□□□ -0.27
NUP88-210ENST00000574867 TTC9CQ8N5M4 171 aa13.39□□□□□ -0.27
NUP88-210ENST00000574867 PLEKHA3Q9HB20 300 aa13.39□□□□□ -0.27
NUP88-210ENST00000574867 H3BUA1 57 aa13.38□□□□□ -0.27
NUP88-210ENST00000574867 ELANEP08246 267 aa13.38□□□□□ -0.27
NUP88-210ENST00000574867 APELAP0DMC3 54 aa13.38□□□□□ -0.27
NUP88-210ENST00000574867 FOXE3Q13461 319 aa13.38□□□□□ -0.27
NUP88-210ENST00000574867 FAM90A26D6RGX4 464 aa13.38□□□□□ -0.27
NUP88-210ENST00000574867 PITX3O75364 302 aa13.38□□□□□ -0.27
NUP88-210ENST00000574867 IGLV1-40P01703 118 aa13.38□□□□□ -0.27
NUP88-210ENST00000574867 C10orf99Q6UWK7 81 aa13.38□□□□□ -0.27
NUP88-210ENST00000574867 MDFIQ99750 246 aa13.38□□□□□ -0.27
NUP88-210ENST00000574867 HSPB7Q9UBY9 170 aa13.38□□□□□ -0.27
NUP88-210ENST00000574867 ALG5Q9Y673 324 aa13.38□□□□□ -0.27
NUP88-210ENST00000574867 COL6A5A8TX70 2615 aa13.37□□□□□ -0.27
NUP88-210ENST00000574867 INS-IGF2F8WCM5 200 aa13.37□□□□□ -0.27
NUP88-210ENST00000574867 SSNA1O43805 119 aa13.37□□□□□ -0.27
NUP88-210ENST00000574867 FBXO24O75426 580 aa13.37□□□□□ -0.27
NUP88-210ENST00000574867 BRI3O95415 125 aa13.37□□□□□ -0.27
NUP88-210ENST00000574867 CRYGCP07315 174 aa13.37□□□□□ -0.27
NUP88-210ENST00000574867 AREGP15514 252 aa13.37□□□□□ -0.27
NUP88-210ENST00000574867 PSMB6P28072 239 aa13.37□□□□□ -0.27
NUP88-210ENST00000574867 RNF152Q8N8N0 203 aa13.37□□□□□ -0.27
NUP88-210ENST00000574867 ENY2Q9NPA8 101 aa13.37□□□□□ -0.27
NUP88-210ENST00000574867 SOX15O60248 233 aa13.36□□□□□ -0.27
NUP88-210ENST00000574867 PSMB8P28062 276 aa13.36□□□□□ -0.27
NUP88-210ENST00000574867 HOXA1P49639 335 aaPredicted RBP13.36□□□□□ -0.27
NUP88-210ENST00000574867 WT1-ASQ06250 92 aa13.36□□□□□ -0.27
NUP88-210ENST00000574867 TNFRSF9Q07011 255 aa13.36□□□□□ -0.27
NUP88-210ENST00000574867 IAH1Q2TAA2 248 aaPredicted RBP13.36□□□□□ -0.27
NUP88-210ENST00000574867 CXorf66Q5JRM2 361 aaPredicted RBP13.36□□□□□ -0.27
NUP88-210ENST00000574867 C3orf56Q8N813 242 aa13.36□□□□□ -0.27
NUP88-210ENST00000574867 OR5T1Q8NG75 326 aa13.36□□□□□ -0.27
NUP88-210ENST00000574867 OR10W1Q8NGF6 305 aa13.36□□□□□ -0.27
NUP88-210ENST00000574867 ZNF747Q9BV97 191 aa13.36□□□□□ -0.27
NUP88-210ENST00000574867 SLA2Q9H6Q3 261 aa13.36□□□□□ -0.27
NUP88-210ENST00000574867 MPTX1A8MV57 137 aa13.36□□□□□ -0.27
NUP88-210ENST00000574867 OR13C7P0DN81 318 aa13.36□□□□□ -0.27
NUP88-210ENST00000574867 CTRB1P17538 263 aa13.36□□□□□ -0.27
NUP88-210ENST00000574867 CTRB2Q6GPI1 263 aa13.36□□□□□ -0.27
NUP88-210ENST00000574867 TMEM65Q6PI78 240 aa13.36□□□□□ -0.27
NUP88-210ENST00000574867 CCSO14618 274 aa13.35□□□□□ -0.27
NUP88-210ENST00000574867 GSG1LQ6UXU4 331 aa13.35□□□□□ -0.27
NUP88-210ENST00000574867 OR10C1Q96KK4 312 aa13.35□□□□□ -0.27
NUP88-210ENST00000574867 CITED1Q99966 193 aa13.35□□□□□ -0.27
NUP88-210ENST00000574867 C13orf42A0A1B0GVH6 325 aa13.35□□□□□ -0.27
NUP88-210ENST00000574867 C5orf51A6NDU8 294 aa13.35□□□□□ -0.27
NUP88-210ENST00000574867 CEBPZOSA8MTT3 80 aa13.35□□□□□ -0.27
NUP88-210ENST00000574867 FAM25EA8MYX2 175 aa13.35□□□□□ -0.27
NUP88-210ENST00000574867 PF4V1P10720 104 aa13.35□□□□□ -0.27
NUP88-210ENST00000574867 KRTAP10-3P60369 221 aa13.35□□□□□ -0.27
NUP88-210ENST00000574867 ERHP84090 104 aaKnown RBP13.35□□□□□ -0.27
NUP88-210ENST00000574867 SPINK9Q5DT21 86 aa13.35□□□□□ -0.27
NUP88-210ENST00000574867 OR2C3Q8N628 320 aa13.35□□□□□ -0.27
NUP88-210ENST00000574867 ZBTB8BQ8NAP8 495 aaPredicted RBP13.35□□□□□ -0.27
NUP88-210ENST00000574867 OR4D5Q8NGN0 318 aa13.35□□□□□ -0.27
NUP88-210ENST00000574867 ZNF355PQ9NSJ1 428 aa13.35□□□□□ -0.27
NUP88-210ENST00000574867 CYB5BO43169 146 aa13.34□□□□□ -0.27
NUP88-210ENST00000574867 NXPH3O95157 252 aa13.34□□□□□ -0.27
NUP88-210ENST00000574867 REG1AP05451 166 aa13.34□□□□□ -0.27
NUP88-210ENST00000574867 CD28P10747 220 aa13.34□□□□□ -0.27
NUP88-210ENST00000574867 CD83Q01151 205 aa13.34□□□□□ -0.27
NUP88-210ENST00000574867 ZNF114Q8NC26 417 aa13.34□□□□□ -0.27
NUP88-210ENST00000574867 GOSR2O14653 212 aa13.33□□□□□ -0.27
NUP88-210ENST00000574867 MED6O75586 246 aa13.33□□□□□ -0.27
NUP88-210ENST00000574867 DEFA4P12838 97 aa13.33□□□□□ -0.27
NUP88-210ENST00000574867 HIST1H1BP16401 226 aaKnown RBP13.33□□□□□ -0.27
NUP88-210ENST00000574867 NKX2-1P43699 371 aaPredicted RBP13.33□□□□□ -0.27
NUP88-210ENST00000574867 RAB9AP51151 201 aa13.33□□□□□ -0.27
NUP88-210ENST00000574867 TCTEX1D4Q5JR98 221 aa13.33□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms