RNA–Protein interactions for RNA: ENST00000574848.5

LITAF-216, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-216ENST00000574848 CITED2Q99967 270 aaPredicted RBP8.4□□□□□ -1.06
LITAF-216ENST00000574848 CACNG5Q9UF02 275 aa8.4□□□□□ -1.06
LITAF-216ENST00000574848 FBXL17Q9UF56 701 aa8.4□□□□□ -1.06
LITAF-216ENST00000574848 WSB1Q9Y6I7 421 aa8.4□□□□□ -1.06
LITAF-216ENST00000574848 PLXNB1O43157 2135 aa8.39□□□□□ -1.07
LITAF-216ENST00000574848 NUDT19A8MXV4 375 aa8.39□□□□□ -1.07
LITAF-216ENST00000574848 M0R1X1 148 aa8.39□□□□□ -1.07
LITAF-216ENST00000574848 FGF16O43320 207 aa8.39□□□□□ -1.07
LITAF-216ENST00000574848 PITX3O75364 302 aa8.39□□□□□ -1.07
LITAF-216ENST00000574848 SNRNP70P08621 437 aaKnown RBP8.39□□□□□ -1.07
LITAF-216ENST00000574848 FAM106CPP0CH98 169 aa8.39□□□□□ -1.07
LITAF-216ENST00000574848 RRASP10301 218 aa8.39□□□□□ -1.07
LITAF-216ENST00000574848 DUTP33316 252 aaKnown RBP8.39□□□□□ -1.07
LITAF-216ENST00000574848 GNG10P50151 68 aa8.39□□□□□ -1.07
LITAF-216ENST00000574848 POLR2GP62487 172 aaKnown RBP eCLIP8.39□□□□□ -1.07
LITAF-216ENST00000574848 EWSR1Q01844 656 aaKnown RBP eCLIP8.39□□□□□ -1.07
LITAF-216ENST00000574848 TAGLNQ01995 201 aaKnown RBP8.39□□□□□ -1.07
LITAF-216ENST00000574848 EBI3Q14213 229 aa8.39□□□□□ -1.07
LITAF-216ENST00000574848 BEAN1Q3B7T3 259 aa8.39□□□□□ -1.07
LITAF-216ENST00000574848 ZNF585BQ52M93 769 aa8.39□□□□□ -1.07
LITAF-216ENST00000574848 ARSJQ5FYB0 599 aaPredicted RBP8.39□□□□□ -1.07
LITAF-216ENST00000574848 HIST2H2BDQ6DRA6 164 aa8.39□□□□□ -1.07
LITAF-216ENST00000574848 H2BFWTQ7Z2G1 175 aa8.39□□□□□ -1.07
LITAF-216ENST00000574848 ZNF439Q8NDP4 499 aa8.39□□□□□ -1.07
LITAF-216ENST00000574848 DMBX1Q8NFW5 382 aa8.39□□□□□ -1.07
LITAF-216ENST00000574848 OR4F17Q8NGA8 305 aa8.39□□□□□ -1.07
LITAF-216ENST00000574848 OR4S2Q8NH73 311 aa8.39□□□□□ -1.07
LITAF-216ENST00000574848 ST6GALNAC6Q969X2 333 aa8.39□□□□□ -1.07
LITAF-216ENST00000574848 OR4F4Q96R69 305 aa8.39□□□□□ -1.07
LITAF-216ENST00000574848 CITED4Q96RK1 184 aa8.39□□□□□ -1.07
LITAF-216ENST00000574848 AIFM2Q9BRQ8 373 aa8.39□□□□□ -1.07
LITAF-216ENST00000574848 IFI27L2Q9H2X8 130 aa8.39□□□□□ -1.07
LITAF-216ENST00000574848 CYTL1Q9NRR1 136 aa8.39□□□□□ -1.07
LITAF-216ENST00000574848 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.39□□□□□ -1.07
LITAF-216ENST00000574848 SYNGR2O43760 224 aa8.38□□□□□ -1.07
LITAF-216ENST00000574848 DFFBO76075 338 aa8.38□□□□□ -1.07
LITAF-216ENST00000574848 IGKV1-39P01597 117 aa8.38□□□□□ -1.07
LITAF-216ENST00000574848 IGKV1-5P01602 117 aa8.38□□□□□ -1.07
LITAF-216ENST00000574848 IGKV1D-39P04432 117 aa8.38□□□□□ -1.07
LITAF-216ENST00000574848 NMBP08949 121 aa8.38□□□□□ -1.07
LITAF-216ENST00000574848 IL3RAP26951 378 aa8.38□□□□□ -1.07
LITAF-216ENST00000574848 HBG1P69891 147 aa8.38□□□□□ -1.07
LITAF-216ENST00000574848 HBG2P69892 147 aa8.38□□□□□ -1.07
LITAF-216ENST00000574848 DIAPH2-AS1Q14236 149 aa8.38□□□□□ -1.07
LITAF-216ENST00000574848 TCTEX1D4Q5JR98 221 aa8.38□□□□□ -1.07
LITAF-216ENST00000574848 CXorf66Q5JRM2 361 aaPredicted RBP8.38□□□□□ -1.07
LITAF-216ENST00000574848 FAM71F2Q6NXP2 309 aa8.38□□□□□ -1.07
LITAF-216ENST00000574848 C5orf56Q8N8D9 126 aa8.38□□□□□ -1.07
LITAF-216ENST00000574848 OR5AU1Q8NGC0 362 aa8.38□□□□□ -1.07
LITAF-216ENST00000574848 OR10X1Q8NGY0 326 aa8.38□□□□□ -1.07
LITAF-216ENST00000574848 CIB3Q96Q77 187 aaPredicted RBP8.38□□□□□ -1.07
LITAF-216ENST00000574848 CLCC1Q96S66 551 aa8.38□□□□□ -1.07
LITAF-216ENST00000574848 IGHV1-3A0A0C4DH29 117 aa8.37□□□□□ -1.07
LITAF-216ENST00000574848 MARCH11A6NNE9 402 aa8.37□□□□□ -1.07
LITAF-216ENST00000574848 G3V4G9 280 aa8.37□□□□□ -1.07
LITAF-216ENST00000574848 TXNL1O43396 289 aa8.37□□□□□ -1.07
LITAF-216ENST00000574848 FCGR3BO75015 233 aa8.37□□□□□ -1.07
LITAF-216ENST00000574848 RBMXL2O75526 392 aaKnown RBP8.37□□□□□ -1.07
LITAF-216ENST00000574848 S1PR2O95136 353 aa8.37□□□□□ -1.07
LITAF-216ENST00000574848 KRASP01116 189 aa8.37□□□□□ -1.07
LITAF-216ENST00000574848 IGHV3-7P01780 117 aa8.37□□□□□ -1.07
LITAF-216ENST00000574848 SEC11BP0C7V7 166 aa8.37□□□□□ -1.07
LITAF-216ENST00000574848 NQO2P16083 231 aa8.37□□□□□ -1.07
LITAF-216ENST00000574848 TMEM11P17152 192 aa8.37□□□□□ -1.07
LITAF-216ENST00000574848 SULT1A1P50225 295 aa8.37□□□□□ -1.07
LITAF-216ENST00000574848 RAB5CP51148 216 aa8.37□□□□□ -1.07
LITAF-216ENST00000574848 RPL30P62888 115 aaKnown RBP8.37□□□□□ -1.07
LITAF-216ENST00000574848 RPP30P78346 268 aaKnown RBP8.37□□□□□ -1.07
LITAF-216ENST00000574848 BLOC1S1P78537 153 aa8.37□□□□□ -1.07
LITAF-216ENST00000574848 RTL8BQ17RB0 113 aa8.37□□□□□ -1.07
LITAF-216ENST00000574848 NSUN5P1Q3KNT7 163 aa8.37□□□□□ -1.07
LITAF-216ENST00000574848 OR2B11Q5JQS5 317 aa8.37□□□□□ -1.07
LITAF-216ENST00000574848 RPL7L1Q6DKI1 246 aaKnown RBP8.37□□□□□ -1.07
LITAF-216ENST00000574848 SLC25A48Q6ZT89 311 aaKnown RBP8.37□□□□□ -1.07
LITAF-216ENST00000574848 LYG1Q8N1E2 194 aa8.37□□□□□ -1.07
LITAF-216ENST00000574848 Q8N6K4 173 aa8.37□□□□□ -1.07
LITAF-216ENST00000574848 TMEM252Q8N6L7 170 aa8.37□□□□□ -1.07
LITAF-216ENST00000574848 OR1S2Q8NGQ3 325 aa8.37□□□□□ -1.07
LITAF-216ENST00000574848 R3HDM4Q96D70 268 aa8.37□□□□□ -1.07
LITAF-216ENST00000574848 SAT2Q96F10 170 aaPredicted RBP8.37□□□□□ -1.07
LITAF-216ENST00000574848 SMIM8Q96KF7 97 aa8.37□□□□□ -1.07
LITAF-216ENST00000574848 MAGT1Q9H0U3 335 aa8.37□□□□□ -1.07
LITAF-216ENST00000574848 C11orf1Q9H5F2 150 aa8.37□□□□□ -1.07
LITAF-216ENST00000574848 TGP01266 2768 aa8.36□□□□□ -1.07
LITAF-216ENST00000574848 SAA2-SAA4A0A096LPE2 208 aa8.36□□□□□ -1.07
LITAF-216ENST00000574848 A0A0G2JRQ6 117 aa8.36□□□□□ -1.07
LITAF-216ENST00000574848 ANKRD34BA5PLL1 514 aa8.36□□□□□ -1.07
LITAF-216ENST00000574848 LINC00473A8K010 186 aa8.36□□□□□ -1.07
LITAF-216ENST00000574848 RAMP3O60896 148 aa8.36□□□□□ -1.07
LITAF-216ENST00000574848 HRASP01112 189 aa8.36□□□□□ -1.07
LITAF-216ENST00000574848 IGKV1D-33P01593 117 aa8.36□□□□□ -1.07
LITAF-216ENST00000574848 IGKV1-33P01594 117 aa8.36□□□□□ -1.07
LITAF-216ENST00000574848 APOA2P02652 100 aa8.36□□□□□ -1.07
LITAF-216ENST00000574848 SAA2P0DJI9 122 aaPredicted RBP8.36□□□□□ -1.07
LITAF-216ENST00000574848 G6PCP35575 357 aa8.36□□□□□ -1.07
LITAF-216ENST00000574848 UBE2KP61086 200 aa8.36□□□□□ -1.07
LITAF-216ENST00000574848 CT45A1Q5HYN5 189 aa8.36□□□□□ -1.07
LITAF-216ENST00000574848 HSD17B13Q7Z5P4 300 aaPredicted RBP8.36□□□□□ -1.07
LITAF-216ENST00000574848 C1QL4Q86Z23 238 aa8.36□□□□□ -1.07
LITAF-216ENST00000574848 WFDC9Q8NEX5 89 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 117.5 ms