RNA–Protein interactions for RNA: ENST00000573360.5

TVP23A-207, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 2

Gene TVP23A, Length 3,677 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-207ENST00000573360 MSMO1Q15800 293 aa11.42□□□□□ -0.58
TVP23A-207ENST00000573360 ZANQ9Y493 2812 aa11.41□□□□□ -0.58
TVP23A-207ENST00000573360 H7BYZ3 331 aa11.41□□□□□ -0.58
TVP23A-207ENST00000573360 ZNF585BQ52M93 769 aa11.41□□□□□ -0.58
TVP23A-207ENST00000573360 TMEM37Q8WXS4 190 aa11.41□□□□□ -0.58
TVP23A-207ENST00000573360 TAF15Q92804 592 aaKnown RBP eCLIP11.41□□□□□ -0.58
TVP23A-207ENST00000573360 IL22RA2Q969J5 263 aa11.41□□□□□ -0.58
TVP23A-207ENST00000573360 BPESC1Q9GZL8 116 aa11.41□□□□□ -0.58
TVP23A-207ENST00000573360 VAX2Q9UIW0 290 aa11.41□□□□□ -0.58
TVP23A-207ENST00000573360 LOXP28300 417 aaPredicted RBP11.41□□□□□ -0.58
TVP23A-207ENST00000573360 ATP5J2P56134 94 aa11.41□□□□□ -0.58
TVP23A-207ENST00000573360 LOXL3P58215 753 aa11.41□□□□□ -0.58
TVP23A-207ENST00000573360 KLRD1Q13241 179 aa11.41□□□□□ -0.58
TVP23A-207ENST00000573360 FFAR4Q5NUL3 377 aa11.41□□□□□ -0.58
TVP23A-207ENST00000573360 OR10P1Q8NGE3 313 aa11.41□□□□□ -0.58
TVP23A-207ENST00000573360 GATAD1Q8WUU5 269 aa11.41□□□□□ -0.58
TVP23A-207ENST00000573360 A0A1B0GW64 132 aa11.41□□□□□ -0.58
TVP23A-207ENST00000573360 SEC14L6B5MCN3 397 aa11.41□□□□□ -0.58
TVP23A-207ENST00000573360 ZNF726P1Q15940 193 aa11.41□□□□□ -0.58
TVP23A-207ENST00000573360 ABHD12Q8N2K0 398 aa11.41□□□□□ -0.58
TVP23A-207ENST00000573360 ZDHHC16Q969W1 377 aa11.41□□□□□ -0.58
TVP23A-207ENST00000573360 MALSU1Q96EH3 234 aa11.41□□□□□ -0.58
TVP23A-207ENST00000573360 JPT1Q9UK76 154 aa11.41□□□□□ -0.58
TVP23A-207ENST00000573360 RNF212BA8MTL3 300 aa11.4□□□□□ -0.58
TVP23A-207ENST00000573360 PROP1O75360 226 aa11.4□□□□□ -0.58
TVP23A-207ENST00000573360 TEX36Q5VZQ5 186 aa11.4□□□□□ -0.58
TVP23A-207ENST00000573360 PNKDQ8N490 385 aa11.4□□□□□ -0.58
TVP23A-207ENST00000573360 OR10G4Q8NGN3 311 aa11.4□□□□□ -0.58
TVP23A-207ENST00000573360 OR10G9Q8NGN4 311 aa11.4□□□□□ -0.58
TVP23A-207ENST00000573360 OR10G7Q8NGN6 311 aa11.4□□□□□ -0.58
TVP23A-207ENST00000573360 R3HDM4Q96D70 268 aa11.4□□□□□ -0.58
TVP23A-207ENST00000573360 PHOX2AO14813 284 aa11.4□□□□□ -0.58
TVP23A-207ENST00000573360 HNF1AP20823 631 aa11.4□□□□□ -0.58
TVP23A-207ENST00000573360 ERVK-16P61578 105 aa11.4□□□□□ -0.58
TVP23A-207ENST00000573360 TMEM241Q24JQ0 296 aa11.4□□□□□ -0.58
TVP23A-207ENST00000573360 TMEM41BQ5BJD5 291 aa11.4□□□□□ -0.58
TVP23A-207ENST00000573360 FAM90A2PQ658T7 463 aa11.4□□□□□ -0.58
TVP23A-207ENST00000573360 MOB3BQ86TA1 216 aa11.4□□□□□ -0.58
TVP23A-207ENST00000573360 FAM222BQ8WU58 562 aa11.4□□□□□ -0.58
TVP23A-207ENST00000573360 CCL19Q99731 98 aa11.4□□□□□ -0.58
TVP23A-207ENST00000573360 AGMATQ9BSE5 352 aa11.4□□□□□ -0.58
TVP23A-207ENST00000573360 WDR61Q9GZS3 305 aaKnown RBP11.4□□□□□ -0.58
TVP23A-207ENST00000573360 PRRC2AP48634 2157 aaKnown RBP11.4□□□□□ -0.58
TVP23A-207ENST00000573360 C16orf82Q7Z2V1 217 aa11.4□□□□□ -0.58
TVP23A-207ENST00000573360 HAPLN4Q86UW8 402 aa11.4□□□□□ -0.58
TVP23A-207ENST00000573360 IFI27L2Q9H2X8 130 aa11.4□□□□□ -0.58
TVP23A-207ENST00000573360 ZMAT5Q9UDW3 170 aaKnown RBP11.4□□□□□ -0.58
TVP23A-207ENST00000573360 PIGBOS1A0A0B4J2F0 54 aa11.39□□□□□ -0.59
TVP23A-207ENST00000573360 WNT2P09544 360 aa11.39□□□□□ -0.59
TVP23A-207ENST00000573360 CHRNA7P36544 502 aa11.39□□□□□ -0.59
TVP23A-207ENST00000573360 LRRC75BQ2VPJ9 315 aa11.39□□□□□ -0.59
TVP23A-207ENST00000573360 LINC00312Q9Y6C7 94 aa11.39□□□□□ -0.59
TVP23A-207ENST00000573360 MTORP42345 2549 aa11.39□□□□□ -0.59
TVP23A-207ENST00000573360 TRAV3A0A0B4J244 114 aa11.39□□□□□ -0.59
TVP23A-207ENST00000573360 A0A1B0GWJ7 208 aa11.39□□□□□ -0.59
TVP23A-207ENST00000573360 MARCH11A6NNE9 402 aa11.39□□□□□ -0.59
TVP23A-207ENST00000573360 PAGE4O60829 102 aa11.39□□□□□ -0.59
TVP23A-207ENST00000573360 BSXQ3C1V8 233 aa11.39□□□□□ -0.59
TVP23A-207ENST00000573360 TRAT1Q6PIZ9 186 aa11.39□□□□□ -0.59
TVP23A-207ENST00000573360 ZNF66Q6ZN08 573 aa11.39□□□□□ -0.59
TVP23A-207ENST00000573360 RAI1Q7Z5J4 1906 aaPredicted RBP11.39□□□□□ -0.59
TVP23A-207ENST00000573360 CXorf65A6NEN9 183 aa11.39□□□□□ -0.59
TVP23A-207ENST00000573360 ZNF729A6NN14 1252 aaPredicted RBP11.39□□□□□ -0.59
TVP23A-207ENST00000573360 PPP5D1E7EU14 171 aa11.39□□□□□ -0.59
TVP23A-207ENST00000573360 RAB29O14966 203 aa11.39□□□□□ -0.59
TVP23A-207ENST00000573360 IFNA10P01566 189 aa11.39□□□□□ -0.59
TVP23A-207ENST00000573360 IGKV1-16P04430 117 aa11.39□□□□□ -0.59
TVP23A-207ENST00000573360 USF2Q15853 346 aaPredicted RBP11.39□□□□□ -0.59
TVP23A-207ENST00000573360 OR13D1Q8NGV5 346 aa11.39□□□□□ -0.59
TVP23A-207ENST00000573360 OR4A16Q8NH70 328 aa11.39□□□□□ -0.59
TVP23A-207ENST00000573360 PINX1Q96BK5 328 aaKnown RBP11.39□□□□□ -0.59
TVP23A-207ENST00000573360 MRPL20Q9BYC9 149 aaKnown RBP11.39□□□□□ -0.59
TVP23A-207ENST00000573360 A0A087WWC5 75 aa11.38□□□□□ -0.59
TVP23A-207ENST00000573360 DUTP33316 252 aaKnown RBP11.38□□□□□ -0.59
TVP23A-207ENST00000573360 TNFRSF9Q07011 255 aa11.38□□□□□ -0.59
TVP23A-207ENST00000573360 GAMTQ14353 236 aa11.38□□□□□ -0.59
TVP23A-207ENST00000573360 HES1Q14469 280 aa11.38□□□□□ -0.59
TVP23A-207ENST00000573360 SRSF7Q16629 238 aaKnown RBP eCLIP11.38□□□□□ -0.59
TVP23A-207ENST00000573360 RPP25LQ8N5L8 163 aaKnown RBP11.38□□□□□ -0.59
TVP23A-207ENST00000573360 ABHD5Q8WTS1 349 aa11.38□□□□□ -0.59
TVP23A-207ENST00000573360 TMEM204Q9BSN7 226 aa11.38□□□□□ -0.59
TVP23A-207ENST00000573360 SLC35D1Q9NTN3 355 aa11.38□□□□□ -0.59
TVP23A-207ENST00000573360 RPUSD1Q9UJJ7 312 aaKnown RBP11.38□□□□□ -0.59
TVP23A-207ENST00000573360 C22orf46C9J442 243 aa11.38□□□□□ -0.59
TVP23A-207ENST00000573360 SERF2P84101 59 aa11.38□□□□□ -0.59
TVP23A-207ENST00000573360 HTD2P86397 168 aa11.38□□□□□ -0.59
TVP23A-207ENST00000573360 MEF2BQ02080 365 aaPredicted RBP11.38□□□□□ -0.59
TVP23A-207ENST00000573360 PNRC1Q12796 327 aaPredicted RBP11.38□□□□□ -0.59
TVP23A-207ENST00000573360 DPPA3Q6W0C5 159 aa11.38□□□□□ -0.59
TVP23A-207ENST00000573360 C1QL4Q86Z23 238 aa11.38□□□□□ -0.59
TVP23A-207ENST00000573360 ZNF295-AS1Q8N0V1 137 aa11.38□□□□□ -0.59
TVP23A-207ENST00000573360 DTD1Q8TEA8 209 aa11.38□□□□□ -0.59
TVP23A-207ENST00000573360 LSM10Q969L4 123 aaKnown RBP11.38□□□□□ -0.59
TVP23A-207ENST00000573360 PACRGQ96M98 296 aaPredicted RBP11.38□□□□□ -0.59
TVP23A-207ENST00000573360 SDF2L1Q9HCN8 221 aa11.38□□□□□ -0.59
TVP23A-207ENST00000573360 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.38□□□□□ -0.59
TVP23A-207ENST00000573360 GALR1P47211 349 aa11.38□□□□□ -0.59
TVP23A-207ENST00000573360 NEIL1Q96FI4 390 aaPredicted RBP11.38□□□□□ -0.59
TVP23A-207ENST00000573360 VPS13CQ709C8 3753 aa11.37□□□□□ -0.59
TVP23A-207ENST00000573360 A0A1W2PPV4 95 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms