RNA–Protein interactions for RNA: ENST00000573332.5

LITAF-212, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-212ENST00000573332 TRBV9A0A0B4J1U6 114 aa13.41□□□□□ -0.26
LITAF-212ENST00000573332 A0A0B4J293 547 aa13.41□□□□□ -0.26
LITAF-212ENST00000573332 A0A0B4J2A0 478 aa13.41□□□□□ -0.26
LITAF-212ENST00000573332 A0A0G2JRQ6 117 aa13.41□□□□□ -0.26
LITAF-212ENST00000573332 IGLC7A0M8Q6 106 aa13.41□□□□□ -0.26
LITAF-212ENST00000573332 DBX1A6NMT0 343 aa13.41□□□□□ -0.26
LITAF-212ENST00000573332 SFT2D2O95562 160 aa13.41□□□□□ -0.26
LITAF-212ENST00000573332 TRGV3P03979 118 aa13.41□□□□□ -0.26
LITAF-212ENST00000573332 CTRB1P17538 263 aa13.41□□□□□ -0.26
LITAF-212ENST00000573332 PSMB6P28072 239 aa13.41□□□□□ -0.26
LITAF-212ENST00000573332 HSPE1P61604 102 aaKnown RBP13.41□□□□□ -0.26
LITAF-212ENST00000573332 IFITM3Q01628 133 aa13.41□□□□□ -0.26
LITAF-212ENST00000573332 AARDQ4LEZ3 155 aa13.41□□□□□ -0.26
LITAF-212ENST00000573332 CTRB2Q6GPI1 263 aa13.41□□□□□ -0.26
LITAF-212ENST00000573332 TREML4Q6UXN2 200 aa13.41□□□□□ -0.26
LITAF-212ENST00000573332 LGI3Q8N145 548 aa13.41□□□□□ -0.26
LITAF-212ENST00000573332 LRTM2Q8N967 370 aa13.41□□□□□ -0.26
LITAF-212ENST00000573332 KLHL30-AS1Q8NEE0 82 aa13.41□□□□□ -0.26
LITAF-212ENST00000573332 CASTOR1Q8WTX7 329 aa13.41□□□□□ -0.26
LITAF-212ENST00000573332 MS4A10Q96PG2 267 aa13.41□□□□□ -0.26
LITAF-212ENST00000573332 ALX4Q9H161 411 aaPredicted RBP13.41□□□□□ -0.26
LITAF-212ENST00000573332 COA4Q9NYJ1 87 aa13.41□□□□□ -0.26
LITAF-212ENST00000573332 SHPKQ9UHJ6 478 aa13.41□□□□□ -0.26
LITAF-212ENST00000573332 A0A0G2JLM5 398 aa13.4□□□□□ -0.26
LITAF-212ENST00000573332 DUXBA0A1W2PPF3 345 aa13.4□□□□□ -0.26
LITAF-212ENST00000573332 NUDT19A8MXV4 375 aa13.4□□□□□ -0.26
LITAF-212ENST00000573332 I3L521 148 aa13.4□□□□□ -0.26
LITAF-212ENST00000573332 TCRBP04435 133 aa13.4□□□□□ -0.26
LITAF-212ENST00000573332 AREGP15514 252 aa13.4□□□□□ -0.26
LITAF-212ENST00000573332 MYCNOSP40205 109 aa13.4□□□□□ -0.26
LITAF-212ENST00000573332 TPPP2P59282 170 aa13.4□□□□□ -0.26
LITAF-212ENST00000573332 PPP1R1AQ13522 171 aa13.4□□□□□ -0.26
LITAF-212ENST00000573332 IZUMO4Q1ZYL8 232 aa13.4□□□□□ -0.26
LITAF-212ENST00000573332 MZT2BQ6NZ67 158 aa13.4□□□□□ -0.26
LITAF-212ENST00000573332 C8orf86Q6ZUL3 223 aa13.4□□□□□ -0.26
LITAF-212ENST00000573332 SLC35G3Q8N808 338 aa13.4□□□□□ -0.26
LITAF-212ENST00000573332 USMG5Q96IX5 58 aa13.4□□□□□ -0.26
LITAF-212ENST00000573332 ZNF355PQ9NSJ1 428 aa13.4□□□□□ -0.26
LITAF-212ENST00000573332 FLVCR2Q9UPI3 526 aa13.4□□□□□ -0.26
LITAF-212ENST00000573332 DHFRP00374 187 aa13.39□□□□□ -0.27
LITAF-212ENST00000573332 VAMP1P23763 118 aa13.39□□□□□ -0.27
LITAF-212ENST00000573332 ETV3LQ6ZN32 361 aa13.39□□□□□ -0.27
LITAF-212ENST00000573332 Q6ZRM9 215 aa13.39□□□□□ -0.27
LITAF-212ENST00000573332 OR10W1Q8NGF6 305 aa13.39□□□□□ -0.27
LITAF-212ENST00000573332 RNASE11Q8TAA1 199 aaKnown RBP13.39□□□□□ -0.27
LITAF-212ENST00000573332 GPR146Q96CH1 333 aa13.39□□□□□ -0.27
LITAF-212ENST00000573332 GNB4Q9HAV0 340 aa13.39□□□□□ -0.27
LITAF-212ENST00000573332 C9orf170A2RU37 121 aa13.38□□□□□ -0.27
LITAF-212ENST00000573332 FAM223BA6NKX1 122 aa13.38□□□□□ -0.27
LITAF-212ENST00000573332 RBMXL2O75526 392 aaKnown RBP13.38□□□□□ -0.27
LITAF-212ENST00000573332 OR4E1P0C645 316 aa13.38□□□□□ -0.27
LITAF-212ENST00000573332 PRCDQ00LT1 54 aa13.38□□□□□ -0.27
LITAF-212ENST00000573332 WT1-ASQ06250 92 aa13.38□□□□□ -0.27
LITAF-212ENST00000573332 NMSQ5H8A3 153 aa13.38□□□□□ -0.27
LITAF-212ENST00000573332 FAM223AQ8IWN6 122 aa13.38□□□□□ -0.27
LITAF-212ENST00000573332 WFDC9Q8NEX5 89 aa13.38□□□□□ -0.27
LITAF-212ENST00000573332 FANCD2OSQ96PS1 177 aa13.38□□□□□ -0.27
LITAF-212ENST00000573332 P2RX4Q99571 388 aa13.38□□□□□ -0.27
LITAF-212ENST00000573332 C20orf85Q9H1P6 137 aa13.38□□□□□ -0.27
LITAF-212ENST00000573332 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.38□□□□□ -0.27
LITAF-212ENST00000573332 PRR13Q9NZ81 148 aa13.38□□□□□ -0.27
LITAF-212ENST00000573332 TRRAPQ9Y4A5 3859 aa13.37□□□□□ -0.27
LITAF-212ENST00000573332 FAM240BA0A1B0GVZ2 78 aa13.37□□□□□ -0.27
LITAF-212ENST00000573332 INS-IGF2F8WCM5 200 aa13.37□□□□□ -0.27
LITAF-212ENST00000573332 CCL24O00175 119 aa13.37□□□□□ -0.27
LITAF-212ENST00000573332 LGALS1P09382 135 aaKnown RBP13.37□□□□□ -0.27
LITAF-212ENST00000573332 OR13C7P0DN81 318 aa13.37□□□□□ -0.27
LITAF-212ENST00000573332 HIST1H1BP16401 226 aaKnown RBP13.37□□□□□ -0.27
LITAF-212ENST00000573332 MECP2P51608 486 aaKnown RBP13.37□□□□□ -0.27
LITAF-212ENST00000573332 RAB25P57735 213 aa13.37□□□□□ -0.27
LITAF-212ENST00000573332 FHL3Q13643 280 aa13.37□□□□□ -0.27
LITAF-212ENST00000573332 ANKRD55Q3KP44 614 aa13.37□□□□□ -0.27
LITAF-212ENST00000573332 PDLIM3Q53GG5 364 aaPredicted RBP13.37□□□□□ -0.27
LITAF-212ENST00000573332 LYZL2Q7Z4W2 148 aa13.37□□□□□ -0.27
LITAF-212ENST00000573332 MRPL41Q8IXM3 137 aaKnown RBP13.37□□□□□ -0.27
LITAF-212ENST00000573332 NECAP1Q8NC96 275 aa13.37□□□□□ -0.27
LITAF-212ENST00000573332 OR52E5Q8NH55 327 aa13.37□□□□□ -0.27
LITAF-212ENST00000573332 RAX2Q96IS3 184 aa13.37□□□□□ -0.27
LITAF-212ENST00000573332 HINT2Q9BX68 163 aa13.37□□□□□ -0.27
LITAF-212ENST00000573332 CACFD1Q9UGQ2 172 aa13.37□□□□□ -0.27
LITAF-212ENST00000573332 IGLV11-55A0A075B6I3 123 aa13.36□□□□□ -0.27
LITAF-212ENST00000573332 C13orf42A0A1B0GVH6 325 aa13.36□□□□□ -0.27
LITAF-212ENST00000573332 ST8SIA3O43173 380 aa13.36□□□□□ -0.27
LITAF-212ENST00000573332 HLA-AP01891 365 aaKnown RBP13.36□□□□□ -0.27
LITAF-212ENST00000573332 PF4P02776 101 aa13.36□□□□□ -0.27
LITAF-212ENST00000573332 PRH1P02810 166 aa13.36□□□□□ -0.27
LITAF-212ENST00000573332 ANXA7P20073 488 aaKnown RBP13.36□□□□□ -0.27
LITAF-212ENST00000573332 RHOGP84095 191 aa13.36□□□□□ -0.27
LITAF-212ENST00000573332 DHRS2Q13268 280 aa13.36□□□□□ -0.27
LITAF-212ENST00000573332 LYG2Q86SG7 212 aa13.36□□□□□ -0.27
LITAF-212ENST00000573332 CACNG5Q9UF02 275 aa13.36□□□□□ -0.27
LITAF-212ENST00000573332 DUS4LO95620 317 aaKnown RBP13.35□□□□□ -0.27
LITAF-212ENST00000573332 REG1AP05451 166 aa13.35□□□□□ -0.27
LITAF-212ENST00000573332 SULT1A3P0DMM9 295 aa13.35□□□□□ -0.27
LITAF-212ENST00000573332 SULT1A4P0DMN0 295 aa13.35□□□□□ -0.27
LITAF-212ENST00000573332 DEFA4P12838 97 aa13.35□□□□□ -0.27
LITAF-212ENST00000573332 ZNF343Q6P1L6 599 aa13.35□□□□□ -0.27
LITAF-212ENST00000573332 OR2C3Q8N628 320 aa13.35□□□□□ -0.27
LITAF-212ENST00000573332 LINC00482Q8N8I6 264 aa13.35□□□□□ -0.27
LITAF-212ENST00000573332 DUSP18Q8NEJ0 188 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms