RNA–Protein interactions for RNA: ENST00000571249.1

CHD3-213, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-213ENST00000571249 IFT46Q9NQC8 304 aa5.15□□□□□ -1.59
CHD3-213ENST00000571249 PIPOXQ9P0Z9 390 aa5.15□□□□□ -1.59
CHD3-213ENST00000571249 PAIP2BQ9ULR5 123 aaKnown RBP5.15□□□□□ -1.59
CHD3-213ENST00000571249 IGLV2-18A0A075B6J9 118 aa5.14□□□□□ -1.59
CHD3-213ENST00000571249 TRGV11A0A075B6L2 103 aa5.14□□□□□ -1.59
CHD3-213ENST00000571249 A0A0B4J2A0 478 aa5.14□□□□□ -1.59
CHD3-213ENST00000571249 FAM230AA0A1W2PPH8 454 aa5.14□□□□□ -1.59
CHD3-213ENST00000571249 MSGN1A6NI15 193 aa5.14□□□□□ -1.59
CHD3-213ENST00000571249 FABP7O15540 132 aa5.14□□□□□ -1.59
CHD3-213ENST00000571249 SSNA1O43805 119 aa5.14□□□□□ -1.59
CHD3-213ENST00000571249 NXPH2O95156 264 aa5.14□□□□□ -1.59
CHD3-213ENST00000571249 MBPP02686 304 aaPredicted RBP5.14□□□□□ -1.59
CHD3-213ENST00000571249 FCER2P06734 321 aa5.14□□□□□ -1.59
CHD3-213ENST00000571249 ANXA7P20073 488 aaKnown RBP5.14□□□□□ -1.59
CHD3-213ENST00000571249 SERPINA2P20848 420 aa5.14□□□□□ -1.59
CHD3-213ENST00000571249 ZBTB25P24278 435 aa5.14□□□□□ -1.59
CHD3-213ENST00000571249 BMI1P35226 326 aa5.14□□□□□ -1.59
CHD3-213ENST00000571249 HRH1P35367 487 aa5.14□□□□□ -1.59
CHD3-213ENST00000571249 NKX2-5P52952 324 aaPredicted RBP5.14□□□□□ -1.59
CHD3-213ENST00000571249 RBM11P57052 281 aaKnown RBP5.14□□□□□ -1.59
CHD3-213ENST00000571249 TAS2R31P59538 309 aa5.14□□□□□ -1.59
CHD3-213ENST00000571249 GNG3P63215 75 aa5.14□□□□□ -1.59
CHD3-213ENST00000571249 IL24Q13007 206 aa5.14□□□□□ -1.59
CHD3-213ENST00000571249 ARFRP1Q13795 201 aa5.14□□□□□ -1.59
CHD3-213ENST00000571249 LGALS9BQ3B8N2 356 aa5.14□□□□□ -1.59
CHD3-213ENST00000571249 PLCXD3Q63HM9 321 aa5.14□□□□□ -1.59
CHD3-213ENST00000571249 LINC00596Q86U02 117 aa5.14□□□□□ -1.59
CHD3-213ENST00000571249 BEST4Q8NFU0 473 aa5.14□□□□□ -1.59
CHD3-213ENST00000571249 OR2AK2Q8NG84 335 aa5.14□□□□□ -1.59
CHD3-213ENST00000571249 OR5AP2Q8NGF4 316 aa5.14□□□□□ -1.59
CHD3-213ENST00000571249 OR10K1Q8NGX5 313 aa5.14□□□□□ -1.59
CHD3-213ENST00000571249 OR4K15Q8NH41 348 aa5.14□□□□□ -1.59
CHD3-213ENST00000571249 TERB2Q8NHR7 220 aa5.14□□□□□ -1.59
CHD3-213ENST00000571249 S1PR3Q99500 378 aa5.14□□□□□ -1.59
CHD3-213ENST00000571249 SEC22CQ9BRL7 303 aa5.14□□□□□ -1.59
CHD3-213ENST00000571249 GGTLC1Q9BX51 225 aa5.14□□□□□ -1.59
CHD3-213ENST00000571249 SLA2Q9H6Q3 261 aa5.14□□□□□ -1.59
CHD3-213ENST00000571249 SEBOXQ9HB31 216 aaPredicted RBP5.14□□□□□ -1.59
CHD3-213ENST00000571249 RCC2Q9P258 522 aaKnown RBP5.14□□□□□ -1.59
CHD3-213ENST00000571249 SHPKQ9UHJ6 478 aa5.14□□□□□ -1.59
CHD3-213ENST00000571249 ZNF580Q9UK33 172 aa5.14□□□□□ -1.59
CHD3-213ENST00000571249 GPR132Q9UNW8 380 aa5.14□□□□□ -1.59
CHD3-213ENST00000571249 TRBV6-6A0A0A6YYG2 114 aa5.13□□□□□ -1.59
CHD3-213ENST00000571249 IGHV3-72A0A0B4J1Y9 119 aa5.13□□□□□ -1.59
CHD3-213ENST00000571249 NOS1APO75052 506 aaPredicted RBP5.13□□□□□ -1.59
CHD3-213ENST00000571249 PDCD6O75340 191 aa5.13□□□□□ -1.59
CHD3-213ENST00000571249 RLN1P04808 185 aa5.13□□□□□ -1.59
CHD3-213ENST00000571249 OR4E1P0C645 316 aa5.13□□□□□ -1.59
CHD3-213ENST00000571249 FUT3P21217 361 aa5.13□□□□□ -1.59
CHD3-213ENST00000571249 NPBWR2P48146 333 aa5.13□□□□□ -1.59
CHD3-213ENST00000571249 MRPS15P82914 257 aaKnown RBP5.13□□□□□ -1.59
CHD3-213ENST00000571249 EBI3Q14213 229 aa5.13□□□□□ -1.59
CHD3-213ENST00000571249 MPV17LQ2QL34 196 aa5.13□□□□□ -1.59
CHD3-213ENST00000571249 Q5BKY6 102 aa5.13□□□□□ -1.59
CHD3-213ENST00000571249 ZNF660Q6AZW8 331 aaPredicted RBP5.13□□□□□ -1.59
CHD3-213ENST00000571249 LPCAT3Q6P1A2 487 aa5.13□□□□□ -1.59
CHD3-213ENST00000571249 DHRS11Q6UWP2 260 aa5.13□□□□□ -1.59
CHD3-213ENST00000571249 HEPN1Q6WQI6 88 aa5.13□□□□□ -1.59
CHD3-213ENST00000571249 SLC25A26Q70HW3 274 aa5.13□□□□□ -1.59
CHD3-213ENST00000571249 C6orf201Q7Z4U5 140 aa5.13□□□□□ -1.59
CHD3-213ENST00000571249 TBC1D26Q86UD7 250 aa5.13□□□□□ -1.59
CHD3-213ENST00000571249 TMEM17Q86X19 198 aa5.13□□□□□ -1.59
CHD3-213ENST00000571249 ZNF573Q86YE8 665 aa5.13□□□□□ -1.59
CHD3-213ENST00000571249 C9orf62Q8N4C0 152 aa5.13□□□□□ -1.59
CHD3-213ENST00000571249 C12orf45Q8N5I9 185 aaPredicted RBP5.13□□□□□ -1.59
CHD3-213ENST00000571249 Q8N6K4 173 aa5.13□□□□□ -1.59
CHD3-213ENST00000571249 OR5H2Q8NGV7 314 aa5.13□□□□□ -1.59
CHD3-213ENST00000571249 CASTOR1Q8WTX7 329 aa5.13□□□□□ -1.59
CHD3-213ENST00000571249 MITD1Q8WV92 249 aa5.13□□□□□ -1.59
CHD3-213ENST00000571249 TMEM170AQ8WVE7 144 aa5.13□□□□□ -1.59
CHD3-213ENST00000571249 SCGB3A2Q96PL1 93 aa5.13□□□□□ -1.59
CHD3-213ENST00000571249 TXN2Q99757 166 aa5.13□□□□□ -1.59
CHD3-213ENST00000571249 SULT4A1Q9BR01 284 aa5.13□□□□□ -1.59
CHD3-213ENST00000571249 PLSCR3Q9NRY6 295 aa5.13□□□□□ -1.59
CHD3-213ENST00000571249 SLC35D1Q9NTN3 355 aa5.13□□□□□ -1.59
CHD3-213ENST00000571249 PLEKHJ1Q9NW61 149 aa5.13□□□□□ -1.59
CHD3-213ENST00000571249 MTCH1Q9NZJ7 389 aa5.13□□□□□ -1.59
CHD3-213ENST00000571249 OR6C3Q9NZP0 311 aa5.13□□□□□ -1.59
CHD3-213ENST00000571249 ANXA10Q9UJ72 324 aa5.13□□□□□ -1.59
CHD3-213ENST00000571249 LOC102724200A0A096LPH7 203 aaPredicted RBP5.12□□□□□ -1.59
CHD3-213ENST00000571249 TRAV41A0A0B4J266 112 aa5.12□□□□□ -1.59
CHD3-213ENST00000571249 C9orf170A2RU37 121 aa5.12□□□□□ -1.59
CHD3-213ENST00000571249 DBX1A6NMT0 343 aa5.12□□□□□ -1.59
CHD3-213ENST00000571249 HMSDA8MTL9 139 aa5.12□□□□□ -1.59
CHD3-213ENST00000571249 KRTAP29-1A8MX34 341 aaPredicted RBP5.12□□□□□ -1.59
CHD3-213ENST00000571249 J3QT63 122 aa5.12□□□□□ -1.59
CHD3-213ENST00000571249 GEMIN2O14893 280 aaKnown RBP5.12□□□□□ -1.59
CHD3-213ENST00000571249 NAPSAO96009 420 aa5.12□□□□□ -1.59
CHD3-213ENST00000571249 IGHV3-7P01780 117 aa5.12□□□□□ -1.59
CHD3-213ENST00000571249 PMP2P02689 132 aa5.12□□□□□ -1.59
CHD3-213ENST00000571249 FCGR3AP08637 254 aa5.12□□□□□ -1.59
CHD3-213ENST00000571249 IL6RP08887 468 aaPredicted RBP5.12□□□□□ -1.59
CHD3-213ENST00000571249 GSTT2P0CG29 244 aa5.12□□□□□ -1.59
CHD3-213ENST00000571249 VPREB1P12018 145 aa5.12□□□□□ -1.59
CHD3-213ENST00000571249 CTRB1P17538 263 aa5.12□□□□□ -1.59
CHD3-213ENST00000571249 EDN2P20800 178 aa5.12□□□□□ -1.59
CHD3-213ENST00000571249 CAMLGP49069 296 aa5.12□□□□□ -1.59
CHD3-213ENST00000571249 RAB7AP51149 207 aa5.12□□□□□ -1.59
CHD3-213ENST00000571249 ERVK11-1P61568 191 aa5.12□□□□□ -1.59
CHD3-213ENST00000571249 DHRS2Q13268 280 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms