RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 TIGITQ495A1 244 aa2.91□□□□□ -1.94
SMG6-208ENST00000570874 MORN2Q502X0 79 aa2.91□□□□□ -1.94
SMG6-208ENST00000570874 Q5BKY6 102 aa2.91□□□□□ -1.94
SMG6-208ENST00000570874 UBE2NLQ5JXB2 153 aa2.91□□□□□ -1.94
SMG6-208ENST00000570874 ZNF343Q6P1L6 599 aa2.91□□□□□ -1.94
SMG6-208ENST00000570874 RPL22L1Q6P5R6 122 aaKnown RBP2.91□□□□□ -1.94
SMG6-208ENST00000570874 GOLT1AQ6ZVE7 132 aa2.91□□□□□ -1.94
SMG6-208ENST00000570874 CEACAM19Q7Z692 300 aa2.91□□□□□ -1.94
SMG6-208ENST00000570874 MRPL55Q7Z7F7 128 aaKnown RBP2.91□□□□□ -1.94
SMG6-208ENST00000570874 NAA40Q86UY6 237 aa2.91□□□□□ -1.94
SMG6-208ENST00000570874 C1orf158Q8N1D5 194 aa2.91□□□□□ -1.94
SMG6-208ENST00000570874 GVQW1Q8N7I0 195 aa2.91□□□□□ -1.94
SMG6-208ENST00000570874 ZIC4Q8N9L1 334 aa2.91□□□□□ -1.94
SMG6-208ENST00000570874 FDCSPQ8NFU4 85 aa2.91□□□□□ -1.94
SMG6-208ENST00000570874 OR11H6Q8NGC7 330 aa2.91□□□□□ -1.94
SMG6-208ENST00000570874 OR2G2Q8NGZ5 317 aa2.91□□□□□ -1.94
SMG6-208ENST00000570874 OR10D3Q8NH80 312 aa2.91□□□□□ -1.94
SMG6-208ENST00000570874 OTOSQ8NHW6 89 aa2.91□□□□□ -1.94
SMG6-208ENST00000570874 ZNF418Q8TF45 676 aaPredicted RBP2.91□□□□□ -1.94
SMG6-208ENST00000570874 SLC25A43Q8WUT9 341 aaPredicted RBP2.91□□□□□ -1.94
SMG6-208ENST00000570874 SMIM4Q8WVI0 70 aa2.91□□□□□ -1.94
SMG6-208ENST00000570874 PCNPQ8WW12 178 aaKnown RBP2.91□□□□□ -1.94
SMG6-208ENST00000570874 TMEM54Q969K7 222 aa2.91□□□□□ -1.94
SMG6-208ENST00000570874 TMEM18Q96B42 140 aa2.91□□□□□ -1.94
SMG6-208ENST00000570874 PHYHIPLQ96FC7 376 aa2.91□□□□□ -1.94
SMG6-208ENST00000570874 S100A16Q96FQ6 103 aaKnown RBP2.91□□□□□ -1.94
SMG6-208ENST00000570874 CYYR1Q96J86 154 aa2.91□□□□□ -1.94
SMG6-208ENST00000570874 SMIM8Q96KF7 97 aa2.91□□□□□ -1.94
SMG6-208ENST00000570874 OR2A7Q96R45 310 aa2.91□□□□□ -1.94
SMG6-208ENST00000570874 SLC25A33Q9BSK2 321 aa2.91□□□□□ -1.94
SMG6-208ENST00000570874 NDFIP1Q9BT67 221 aa2.91□□□□□ -1.94
SMG6-208ENST00000570874 TTTY12Q9BZ98 90 aa2.91□□□□□ -1.94
SMG6-208ENST00000570874 NKX6-2Q9C056 277 aaPredicted RBP2.91□□□□□ -1.94
SMG6-208ENST00000570874 DEFB127Q9H1M4 99 aa2.91□□□□□ -1.94
SMG6-208ENST00000570874 C20orf85Q9H1P6 137 aa2.91□□□□□ -1.94
SMG6-208ENST00000570874 SPRR3Q9UBC9 169 aa2.91□□□□□ -1.94
SMG6-208ENST00000570874 ZNF222Q9UK12 451 aa2.91□□□□□ -1.94
SMG6-208ENST00000570874 TNFSF18Q9UNG2 199 aa2.91□□□□□ -1.94
SMG6-208ENST00000570874 ST3GAL6Q9Y274 331 aa2.91□□□□□ -1.94
SMG6-208ENST00000570874 LAMTOR2Q9Y2Q5 125 aa2.91□□□□□ -1.94
SMG6-208ENST00000570874 HDGFL3Q9Y3E1 203 aa2.91□□□□□ -1.94
SMG6-208ENST00000570874 LHFPL6Q9Y693 200 aa2.91□□□□□ -1.94
SMG6-208ENST00000570874 DYSFO75923 2080 aa2.91□□□□□ -1.94
SMG6-208ENST00000570874 TTC28Q96AY4 2481 aa2.91□□□□□ -1.94
SMG6-208ENST00000570874 BDP1A6H8Y1 2624 aa2.9□□□□□ -1.94
SMG6-208ENST00000570874 A0A0A6YYD4 124 aa2.9□□□□□ -1.95
SMG6-208ENST00000570874 IGHV2OR16-5A0A0B4J2B6 119 aa2.9□□□□□ -1.95
SMG6-208ENST00000570874 A0A0D9SG52 128 aa2.9□□□□□ -1.95
SMG6-208ENST00000570874 TRBV5-5A0A0J9YX44 114 aa2.9□□□□□ -1.95
SMG6-208ENST00000570874 OR4C45A6NMZ5 311 aa2.9□□□□□ -1.95
SMG6-208ENST00000570874 A8MXK9 166 aa2.9□□□□□ -1.95
SMG6-208ENST00000570874 EEF1E1-BLOC1S5C9J1V9 151 aa2.9□□□□□ -1.95
SMG6-208ENST00000570874 F8W735 103 aaPredicted RBP2.9□□□□□ -1.95
SMG6-208ENST00000570874 TMEM178BH3BS89 294 aa2.9□□□□□ -1.95
SMG6-208ENST00000570874 AIPO00170 330 aa2.9□□□□□ -1.95
SMG6-208ENST00000570874 PRRG2O14669 202 aa2.9□□□□□ -1.95
SMG6-208ENST00000570874 WNT9BO14905 357 aa2.9□□□□□ -1.95
SMG6-208ENST00000570874 RER1O15258 196 aa2.9□□□□□ -1.95
SMG6-208ENST00000570874 EEF1E1O43324 174 aaKnown RBP2.9□□□□□ -1.95
SMG6-208ENST00000570874 CREBL2O60519 120 aaPredicted RBP2.9□□□□□ -1.95
SMG6-208ENST00000570874 KBTBD11O94819 623 aa2.9□□□□□ -1.95
SMG6-208ENST00000570874 HPRT1P00492 218 aa2.9□□□□□ -1.95
SMG6-208ENST00000570874 IGHV3-9P01782 118 aa2.9□□□□□ -1.95
SMG6-208ENST00000570874 EIF4EP06730 217 aaKnown RBP2.9□□□□□ -1.95
SMG6-208ENST00000570874 PATE4P0C8F1 98 aa2.9□□□□□ -1.95
SMG6-208ENST00000570874 GNB3P16520 340 aa2.9□□□□□ -1.95
SMG6-208ENST00000570874 ELK1P19419 428 aa2.9□□□□□ -1.95
SMG6-208ENST00000570874 G6PCP35575 357 aa2.9□□□□□ -1.95
SMG6-208ENST00000570874 LHX2P50458 406 aa2.9□□□□□ -1.95
SMG6-208ENST00000570874 FABP6P51161 128 aa2.9□□□□□ -1.95
SMG6-208ENST00000570874 UBE2E1P51965 193 aa2.9□□□□□ -1.95
SMG6-208ENST00000570874 ERVFC1-1P60608 527 aa2.9□□□□□ -1.95
SMG6-208ENST00000570874 PLGLB1Q02325 96 aa2.9□□□□□ -1.95
SMG6-208ENST00000570874 HIST1H1AQ02539 215 aaPredicted RBP2.9□□□□□ -1.95
SMG6-208ENST00000570874 HGFACQ04756 655 aa2.9□□□□□ -1.95
SMG6-208ENST00000570874 ENDOGQ14249 297 aaKnown RBP2.9□□□□□ -1.95
SMG6-208ENST00000570874 BATFQ16520 125 aa2.9□□□□□ -1.95
SMG6-208ENST00000570874 CEACAM16Q2WEN9 425 aa2.9□□□□□ -1.95
SMG6-208ENST00000570874 RNASE12Q5GAN4 147 aaKnown RBP2.9□□□□□ -1.95
SMG6-208ENST00000570874 NHLRC3Q5JS37 347 aa2.9□□□□□ -1.95
SMG6-208ENST00000570874 LDLRAD2Q5SZI1 272 aa2.9□□□□□ -1.95
SMG6-208ENST00000570874 OLFML2AQ68BL7 652 aa2.9□□□□□ -1.95
SMG6-208ENST00000570874 DNM1P46Q6ZS02 220 aa2.9□□□□□ -1.95
SMG6-208ENST00000570874 TGIF2LYQ8IUE0 185 aa2.9□□□□□ -1.95
SMG6-208ENST00000570874 CBLN2Q8IUK8 224 aa2.9□□□□□ -1.95
SMG6-208ENST00000570874 PNKDQ8N490 385 aa2.9□□□□□ -1.95
SMG6-208ENST00000570874 SAMD12Q8N8I0 201 aa2.9□□□□□ -1.95
SMG6-208ENST00000570874 OR4M1Q8NGD0 313 aa2.9□□□□□ -1.95
SMG6-208ENST00000570874 OR2G3Q8NGZ4 309 aa2.9□□□□□ -1.95
SMG6-208ENST00000570874 OR52N5Q8NH56 324 aa2.9□□□□□ -1.95
SMG6-208ENST00000570874 OR5AK2Q8NH90 309 aa2.9□□□□□ -1.95
SMG6-208ENST00000570874 IL1F10Q8WWZ1 152 aa2.9□□□□□ -1.95
SMG6-208ENST00000570874 NABP1Q96AH0 204 aa2.9□□□□□ -1.95
SMG6-208ENST00000570874 SLC25A44Q96H78 314 aaPredicted RBP2.9□□□□□ -1.95
SMG6-208ENST00000570874 C4orf45Q96LM5 186 aa2.9□□□□□ -1.95
SMG6-208ENST00000570874 UBE2E2Q96LR5 201 aa2.9□□□□□ -1.95
SMG6-208ENST00000570874 LINC00477Q96M19 166 aa2.9□□□□□ -1.95
SMG6-208ENST00000570874 DERL3Q96Q80 235 aa2.9□□□□□ -1.95
SMG6-208ENST00000570874 FAM173AQ9BQD7 235 aa2.9□□□□□ -1.95
SMG6-208ENST00000570874 SLC25A21Q9BQT8 299 aaPredicted RBP2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms