RNA–Protein interactions for RNA: ENST00000569128.1

CDH11-216, Transcript of cadherin 11, humanhuman

TSL 3

Gene CDH11, Length 781 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-216ENST00000569128 AGMATQ9BSE5 352 aa6.32□□□□□ -1.4
CDH11-216ENST00000569128 RTBDNQ9BSG5 229 aaPredicted RBP6.32□□□□□ -1.4
CDH11-216ENST00000569128 IFI27L2Q9H2X8 130 aa6.32□□□□□ -1.4
CDH11-216ENST00000569128 METTL8Q9H825 291 aaKnown RBP6.32□□□□□ -1.4
CDH11-216ENST00000569128 SLC2A8Q9NY64 477 aa6.32□□□□□ -1.4
CDH11-216ENST00000569128 RBM7Q9Y580 266 aaKnown RBP6.32□□□□□ -1.4
CDH11-216ENST00000569128 AUP1Q9Y679 476 aa6.32□□□□□ -1.4
CDH11-216ENST00000569128 ZNF469Q96JG9 3925 aaPredicted RBP6.32□□□□□ -1.4
CDH11-216ENST00000569128 NOTCH2Q04721 2471 aa6.32□□□□□ -1.4
CDH11-216ENST00000569128 FLNBO75369 2602 aaKnown RBP6.31□□□□□ -1.4
CDH11-216ENST00000569128 ITPR3Q14573 2671 aa6.31□□□□□ -1.4
CDH11-216ENST00000569128 CENPVL3A0A0U1RRI6 287 aa6.31□□□□□ -1.4
CDH11-216ENST00000569128 TNFSF12O43508 249 aa6.31□□□□□ -1.4
CDH11-216ENST00000569128 NDUFB6O95139 128 aa6.31□□□□□ -1.4
CDH11-216ENST00000569128 RBP4P02753 201 aa6.31□□□□□ -1.4
CDH11-216ENST00000569128 ARG1P05089 322 aa6.31□□□□□ -1.4
CDH11-216ENST00000569128 IGHV4-38-2P0DP08 117 aa6.31□□□□□ -1.4
CDH11-216ENST00000569128 CD34P28906 385 aa6.31□□□□□ -1.4
CDH11-216ENST00000569128 EXOSC2Q13868 293 aaKnown RBP6.31□□□□□ -1.4
CDH11-216ENST00000569128 RGS21Q2M5E4 152 aa6.31□□□□□ -1.4
CDH11-216ENST00000569128 LRRC37A5PQ49AS3 106 aa6.31□□□□□ -1.4
CDH11-216ENST00000569128 KLF17Q5JT82 389 aaPredicted RBP6.31□□□□□ -1.4
CDH11-216ENST00000569128 ZNF818PQ6ZRF7 136 aa6.31□□□□□ -1.4
CDH11-216ENST00000569128 LYG1Q8N1E2 194 aa6.31□□□□□ -1.4
CDH11-216ENST00000569128 DYNAPQ8N1N2 210 aa6.31□□□□□ -1.4
CDH11-216ENST00000569128 CENPSQ8N2Z9 138 aa6.31□□□□□ -1.4
CDH11-216ENST00000569128 DRAXINQ8NBI3 349 aaPredicted RBP6.31□□□□□ -1.4
CDH11-216ENST00000569128 DUSP18Q8NEJ0 188 aa6.31□□□□□ -1.4
CDH11-216ENST00000569128 OR9G1Q8NH87 305 aa6.31□□□□□ -1.4
CDH11-216ENST00000569128 ZNF596Q8TC21 504 aa6.31□□□□□ -1.4
CDH11-216ENST00000569128 ENKURQ8TC29 256 aa6.31□□□□□ -1.4
CDH11-216ENST00000569128 CAPSLQ8WWF8 208 aa6.31□□□□□ -1.4
CDH11-216ENST00000569128 TMEM230Q96A57 120 aa6.31□□□□□ -1.4
CDH11-216ENST00000569128 UPRTQ96BW1 309 aa6.31□□□□□ -1.4
CDH11-216ENST00000569128 PRRT1Q99946 306 aa6.31□□□□□ -1.4
CDH11-216ENST00000569128 ZNF251Q9BRH9 671 aa6.31□□□□□ -1.4
CDH11-216ENST00000569128 CLEC7AQ9BXN2 247 aa6.31□□□□□ -1.4
CDH11-216ENST00000569128 OR2D2Q9H210 308 aa6.31□□□□□ -1.4
CDH11-216ENST00000569128 HEXA-AS1Q9H8Q6 139 aa6.31□□□□□ -1.4
CDH11-216ENST00000569128 SDHAF2Q9NX18 166 aa6.31□□□□□ -1.4
CDH11-216ENST00000569128 SCP2D1Q9UJQ7 156 aa6.31□□□□□ -1.4
CDH11-216ENST00000569128 MYO9AB2RTY4 2548 aa6.3□□□□□ -1.4
CDH11-216ENST00000569128 SAA2-SAA4A0A096LPE2 208 aa6.3□□□□□ -1.4
CDH11-216ENST00000569128 ODF3BA8MYP8 253 aa6.3□□□□□ -1.4
CDH11-216ENST00000569128 TOR1AO14656 332 aa6.3□□□□□ -1.4
CDH11-216ENST00000569128 ITGB1BP1O14713 200 aa6.3□□□□□ -1.4
CDH11-216ENST00000569128 IGLV1-47P01700 117 aa6.3□□□□□ -1.4
CDH11-216ENST00000569128 SAA2P0DJI9 122 aaPredicted RBP6.3□□□□□ -1.4
CDH11-216ENST00000569128 REG1BP48304 166 aa6.3□□□□□ -1.4
CDH11-216ENST00000569128 RPL30P62888 115 aaKnown RBP6.3□□□□□ -1.4
CDH11-216ENST00000569128 GAGE5Q13069 117 aa6.3□□□□□ -1.4
CDH11-216ENST00000569128 GAGE6Q13070 117 aa6.3□□□□□ -1.4
CDH11-216ENST00000569128 OXA1LQ15070 435 aa6.3□□□□□ -1.4
CDH11-216ENST00000569128 HLA-DRB5Q30154 266 aa6.3□□□□□ -1.4
CDH11-216ENST00000569128 TMEM30BQ3MIR4 351 aa6.3□□□□□ -1.4
CDH11-216ENST00000569128 Q3ZCU0 254 aa6.3□□□□□ -1.4
CDH11-216ENST00000569128 LY6G6FQ5SQ64 297 aa6.3□□□□□ -1.4
CDH11-216ENST00000569128 BRD3OSQ6XYD6 125 aa6.3□□□□□ -1.4
CDH11-216ENST00000569128 TMED4Q7Z7H5 227 aa6.3□□□□□ -1.4
CDH11-216ENST00000569128 LINC00311Q8N616 119 aa6.3□□□□□ -1.4
CDH11-216ENST00000569128 DRAM1Q8N682 238 aa6.3□□□□□ -1.4
CDH11-216ENST00000569128 OR11H6Q8NGC7 330 aa6.3□□□□□ -1.4
CDH11-216ENST00000569128 OR4P4Q8NGL7 312 aa6.3□□□□□ -1.4
CDH11-216ENST00000569128 OR13D1Q8NGV5 346 aa6.3□□□□□ -1.4
CDH11-216ENST00000569128 DEDD2Q8WXF8 326 aa6.3□□□□□ -1.4
CDH11-216ENST00000569128 C20orf85Q9H1P6 137 aa6.3□□□□□ -1.4
CDH11-216ENST00000569128 NUDT15Q9NV35 164 aa6.3□□□□□ -1.4
CDH11-216ENST00000569128 ZNF221Q9UK13 617 aa6.3□□□□□ -1.4
CDH11-216ENST00000569128 ABCA1O95477 2261 aa6.29□□□□□ -1.4
CDH11-216ENST00000569128 TRAV40A0A0B4J280 105 aa6.29□□□□□ -1.4
CDH11-216ENST00000569128 PCP4L1A6NKN8 68 aa6.29□□□□□ -1.4
CDH11-216ENST00000569128 INMT-MINDY4F8WBC2 141 aa6.29□□□□□ -1.4
CDH11-216ENST00000569128 LY6LH3BQJ8 138 aa6.29□□□□□ -1.4
CDH11-216ENST00000569128 BUB1B-PAK6H3BSN5 160 aa6.29□□□□□ -1.4
CDH11-216ENST00000569128 H3BTX0 84 aa6.29□□□□□ -1.4
CDH11-216ENST00000569128 M0R1X1 148 aa6.29□□□□□ -1.4
CDH11-216ENST00000569128 CD5LO43866 347 aa6.29□□□□□ -1.4
CDH11-216ENST00000569128 PGLYRP1O75594 196 aaPredicted RBP6.29□□□□□ -1.4
CDH11-216ENST00000569128 LY6G6DO95868 133 aa6.29□□□□□ -1.4
CDH11-216ENST00000569128 PTTG1O95997 202 aa6.29□□□□□ -1.4
CDH11-216ENST00000569128 CTSDP07339 412 aaPredicted RBP6.29□□□□□ -1.4
CDH11-216ENST00000569128 AKR1C4P17516 323 aa6.29□□□□□ -1.4
CDH11-216ENST00000569128 UBE2E1P51965 193 aa6.29□□□□□ -1.4
CDH11-216ENST00000569128 EIF4EBP1Q13541 118 aaPredicted RBP6.29□□□□□ -1.4
CDH11-216ENST00000569128 TRIM16LQ309B1 348 aa6.29□□□□□ -1.4
CDH11-216ENST00000569128 SP6Q3SY56 376 aa6.29□□□□□ -1.4
CDH11-216ENST00000569128 PLET1Q6UQ28 207 aa6.29□□□□□ -1.4
CDH11-216ENST00000569128 Q71RC1 249 aaPredicted RBP6.29□□□□□ -1.4
CDH11-216ENST00000569128 ZNF645Q8N7E2 425 aa6.29□□□□□ -1.4
CDH11-216ENST00000569128 ZDHHC22Q8N966 263 aa6.29□□□□□ -1.4
CDH11-216ENST00000569128 OR5AU1Q8NGC0 362 aa6.29□□□□□ -1.4
CDH11-216ENST00000569128 OR10X1Q8NGY0 326 aa6.29□□□□□ -1.4
CDH11-216ENST00000569128 ZNF479Q96JC4 524 aa6.29□□□□□ -1.4
CDH11-216ENST00000569128 C18orf12Q96KH6 178 aa6.29□□□□□ -1.4
CDH11-216ENST00000569128 SLC25A21Q9BQT8 299 aaPredicted RBP6.29□□□□□ -1.4
CDH11-216ENST00000569128 SEC22CQ9BRL7 303 aa6.29□□□□□ -1.4
CDH11-216ENST00000569128 MRPL20Q9BYC9 149 aaKnown RBP6.29□□□□□ -1.4
CDH11-216ENST00000569128 MAGT1Q9H0U3 335 aa6.29□□□□□ -1.4
CDH11-216ENST00000569128 HILPDAQ9Y5L2 63 aa6.29□□□□□ -1.4
CDH11-216ENST00000569128 NUBP2Q9Y5Y2 271 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms