RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 SLC24A4Q8NFF2 622 aa13.77□□□□□ -0.21
CMTM3-213ENST00000566756 C11orf52Q96A22 123 aa13.77□□□□□ -0.21
CMTM3-213ENST00000566756 C14orf144Q96I85 54 aa13.77□□□□□ -0.21
CMTM3-213ENST00000566756 DSPP15924 2871 aaKnown RBP13.77□□□□□ -0.21
CMTM3-213ENST00000566756 HCFC1P51610 2035 aa13.77□□□□□ -0.21
CMTM3-213ENST00000566756 TRAV3A0A0B4J244 114 aa13.76□□□□□ -0.21
CMTM3-213ENST00000566756 ZNF83P51522 516 aa13.76□□□□□ -0.21
CMTM3-213ENST00000566756 MOGAT3Q86VF5 341 aa13.76□□□□□ -0.21
CMTM3-213ENST00000566756 LRP11Q86VZ4 500 aa13.76□□□□□ -0.21
CMTM3-213ENST00000566756 ZNRF1Q8ND25 227 aa13.76□□□□□ -0.21
CMTM3-213ENST00000566756 ZCCHC14Q8WYQ9 949 aaKnown RBP13.76□□□□□ -0.21
CMTM3-213ENST00000566756 C1orf159Q96HA4 380 aa13.76□□□□□ -0.21
CMTM3-213ENST00000566756 RHOVQ96L33 236 aa13.76□□□□□ -0.21
CMTM3-213ENST00000566756 NOL4LQ96MY1 436 aaPredicted RBP13.76□□□□□ -0.21
CMTM3-213ENST00000566756 FAM234AQ9H0X4 552 aa13.76□□□□□ -0.21
CMTM3-213ENST00000566756 ENY2Q9NPA8 101 aa13.76□□□□□ -0.21
CMTM3-213ENST00000566756 ZNF257Q9Y2Q1 563 aa13.76□□□□□ -0.21
CMTM3-213ENST00000566756 CACNA1AO00555 2505 aa13.76□□□□□ -0.21
CMTM3-213ENST00000566756 IL6RP08887 468 aaPredicted RBP13.76□□□□□ -0.21
CMTM3-213ENST00000566756 AREGP15514 252 aa13.76□□□□□ -0.21
CMTM3-213ENST00000566756 SELENOVP59797 346 aa13.76□□□□□ -0.21
CMTM3-213ENST00000566756 CT45A1Q5HYN5 189 aa13.76□□□□□ -0.21
CMTM3-213ENST00000566756 OR4A47Q6IF82 309 aa13.76□□□□□ -0.21
CMTM3-213ENST00000566756 VKORC1L1Q8N0U8 176 aa13.76□□□□□ -0.21
CMTM3-213ENST00000566756 CT45A3Q8NHU0 189 aa13.76□□□□□ -0.21
CMTM3-213ENST00000566756 TMEM37Q8WXS4 190 aa13.76□□□□□ -0.21
CMTM3-213ENST00000566756 PRORYQ9H606 182 aa13.76□□□□□ -0.21
CMTM3-213ENST00000566756 PCNX1Q96RV3 2341 aa13.75□□□□□ -0.21
CMTM3-213ENST00000566756 NCOR2Q9Y618 2525 aa13.75□□□□□ -0.21
CMTM3-213ENST00000566756 POLEQ07864 2286 aa13.75□□□□□ -0.21
CMTM3-213ENST00000566756 IGHV3OR15-7A0A075B7D8 119 aa13.75□□□□□ -0.21
CMTM3-213ENST00000566756 TRGV10A0A0A0MS01 117 aa13.75□□□□□ -0.21
CMTM3-213ENST00000566756 C9JCJ5 164 aa13.75□□□□□ -0.21
CMTM3-213ENST00000566756 C16orf97H3BN30 126 aa13.75□□□□□ -0.21
CMTM3-213ENST00000566756 M0R1B8 84 aa13.75□□□□□ -0.21
CMTM3-213ENST00000566756 SLC31A2O15432 143 aa13.75□□□□□ -0.21
CMTM3-213ENST00000566756 SFTPCP11686 197 aa13.75□□□□□ -0.21
CMTM3-213ENST00000566756 GCHFRP30047 84 aa13.75□□□□□ -0.21
CMTM3-213ENST00000566756 SSX2Q16385 188 aa13.75□□□□□ -0.21
CMTM3-213ENST00000566756 LBHQ53QV2 105 aaPredicted RBP13.75□□□□□ -0.21
CMTM3-213ENST00000566756 ARSJQ5FYB0 599 aaPredicted RBP13.75□□□□□ -0.21
CMTM3-213ENST00000566756 ZNF439Q8NDP4 499 aa13.75□□□□□ -0.21
CMTM3-213ENST00000566756 RND1Q92730 232 aa13.75□□□□□ -0.21
CMTM3-213ENST00000566756 DERL1Q9BUN8 251 aa13.75□□□□□ -0.21
CMTM3-213ENST00000566756 SLC25A10Q9UBX3 287 aaPredicted RBP13.75□□□□□ -0.21
CMTM3-213ENST00000566756 PRNDQ9UKY0 176 aa13.75□□□□□ -0.21
CMTM3-213ENST00000566756 SAA2-SAA4A0A096LPE2 208 aa13.74□□□□□ -0.21
CMTM3-213ENST00000566756 A0A0U1RQK1 487 aa13.74□□□□□ -0.21
CMTM3-213ENST00000566756 ZNF320A2RRD8 509 aa13.74□□□□□ -0.21
CMTM3-213ENST00000566756 SAA2P0DJI9 122 aaPredicted RBP13.74□□□□□ -0.21
CMTM3-213ENST00000566756 YPEL3P61236 119 aaPredicted RBP13.74□□□□□ -0.21
CMTM3-213ENST00000566756 PRR20EP86478 221 aa13.74□□□□□ -0.21
CMTM3-213ENST00000566756 PRR20CP86479 221 aa13.74□□□□□ -0.21
CMTM3-213ENST00000566756 PRR20DP86480 221 aa13.74□□□□□ -0.21
CMTM3-213ENST00000566756 PRR20BP86481 221 aa13.74□□□□□ -0.21
CMTM3-213ENST00000566756 PRR20AP86496 221 aa13.74□□□□□ -0.21
CMTM3-213ENST00000566756 EFNB3Q15768 340 aa13.74□□□□□ -0.21
CMTM3-213ENST00000566756 ST6GALNAC3Q8NDV1 305 aa13.74□□□□□ -0.21
CMTM3-213ENST00000566756 NEUROG1Q92886 237 aa13.74□□□□□ -0.21
CMTM3-213ENST00000566756 RNF7Q9UBF6 113 aa13.74□□□□□ -0.21
CMTM3-213ENST00000566756 SH3BGRL2Q9UJC5 107 aa13.74□□□□□ -0.21
CMTM3-213ENST00000566756 TRAPPC1Q9Y5R8 145 aa13.74□□□□□ -0.21
CMTM3-213ENST00000566756 CADP27708 2225 aa13.74□□□□□ -0.21
CMTM3-213ENST00000566756 TRBV20OR9-2A0A075B6H5 130 aa13.74□□□□□ -0.21
CMTM3-213ENST00000566756 A0A087X0M5 115 aa13.74□□□□□ -0.21
CMTM3-213ENST00000566756 A0A1B0GX30 115 aa13.74□□□□□ -0.21
CMTM3-213ENST00000566756 STUMQ69YW2 141 aa13.74□□□□□ -0.21
CMTM3-213ENST00000566756 TEX38Q6PEX7 206 aa13.74□□□□□ -0.21
CMTM3-213ENST00000566756 C1orf229Q6ZS94 237 aaPredicted RBP13.74□□□□□ -0.21
CMTM3-213ENST00000566756 GBGT1Q8N5D6 347 aa13.74□□□□□ -0.21
CMTM3-213ENST00000566756 STPG3Q8N7X2 389 aa13.74□□□□□ -0.21
CMTM3-213ENST00000566756 ITLN1Q8WWA0 313 aa13.74□□□□□ -0.21
CMTM3-213ENST00000566756 PLPPR2Q96GM1 343 aa13.74□□□□□ -0.21
CMTM3-213ENST00000566756 IDI2-AS1Q9NZ38 188 aa13.74□□□□□ -0.21
CMTM3-213ENST00000566756 IL19Q9UHD0 177 aa13.74□□□□□ -0.21
CMTM3-213ENST00000566756 SPTA1P02549 2419 aa13.74□□□□□ -0.21
CMTM3-213ENST00000566756 CASP6P55212 293 aa13.73□□□□□ -0.21
CMTM3-213ENST00000566756 MRPS11P82912 194 aaKnown RBP13.73□□□□□ -0.21
CMTM3-213ENST00000566756 CLEC12BQ2HXU8 276 aa13.73□□□□□ -0.21
CMTM3-213ENST00000566756 ZNF114Q8NC26 417 aa13.73□□□□□ -0.21
CMTM3-213ENST00000566756 OR10G8Q8NGN5 311 aa13.73□□□□□ -0.21
CMTM3-213ENST00000566756 SGMS2Q8NHU3 365 aa13.73□□□□□ -0.21
CMTM3-213ENST00000566756 UHRF2Q96PU4 802 aa13.73□□□□□ -0.21
CMTM3-213ENST00000566756 SCO2A0A1W2PP80 73 aa13.72□□□□□ -0.21
CMTM3-213ENST00000566756 CA7P43166 264 aa13.72□□□□□ -0.21
CMTM3-213ENST00000566756 C22orf34Q6ZV56 151 aa13.72□□□□□ -0.21
CMTM3-213ENST00000566756 OR5T1Q8NG75 326 aa13.72□□□□□ -0.21
CMTM3-213ENST00000566756 C19orf24Q9BVV8 132 aa13.72□□□□□ -0.21
CMTM3-213ENST00000566756 YTHDF2Q9Y5A9 579 aaKnown RBP13.72□□□□□ -0.21
CMTM3-213ENST00000566756 CHD8Q9HCK8 2581 aa13.72□□□□□ -0.21
CMTM3-213ENST00000566756 TET2Q6N021 2002 aaPredicted RBP13.72□□□□□ -0.21
CMTM3-213ENST00000566756 CA2P00918 260 aa13.72□□□□□ -0.21
CMTM3-213ENST00000566756 TNFSF4P23510 183 aa13.72□□□□□ -0.21
CMTM3-213ENST00000566756 PRCDQ00LT1 54 aa13.72□□□□□ -0.21
CMTM3-213ENST00000566756 SPRNQ5BIV9 151 aa13.72□□□□□ -0.21
CMTM3-213ENST00000566756 PNKDQ8N490 385 aa13.72□□□□□ -0.21
CMTM3-213ENST00000566756 BEND2Q8NDZ0 799 aa13.72□□□□□ -0.21
CMTM3-213ENST00000566756 SLC35E1Q96K37 410 aa13.72□□□□□ -0.21
CMTM3-213ENST00000566756 FKBP11Q9NYL4 201 aa13.72□□□□□ -0.21
CMTM3-213ENST00000566756 TMEM8BA6NDV4 472 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms