RNA–Protein interactions for RNA: ENST00000566612.5

CDH1-210, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 4,138 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-210ENST00000566612 S100A7AQ86SG5 101 aa9.62□□□□□ -0.87
CDH1-210ENST00000566612 MBNL3Q9NUK0 354 aaKnown RBP9.62□□□□□ -0.87
CDH1-210ENST00000566612 HSBP1O75506 76 aa9.62□□□□□ -0.87
CDH1-210ENST00000566612 GCHFRP30047 84 aa9.62□□□□□ -0.87
CDH1-210ENST00000566612 RPL23P62829 140 aaKnown RBP9.62□□□□□ -0.87
CDH1-210ENST00000566612 TXN2Q99757 166 aa9.62□□□□□ -0.87
CDH1-210ENST00000566612 MRPL20Q9BYC9 149 aaKnown RBP9.62□□□□□ -0.87
CDH1-210ENST00000566612 RAB1BQ9H0U4 201 aa9.62□□□□□ -0.87
CDH1-210ENST00000566612 RNF115Q9Y4L5 304 aa9.62□□□□□ -0.87
CDH1-210ENST00000566612 ZNF253O75346 499 aa9.62□□□□□ -0.87
CDH1-210ENST00000566612 RPL27AP46776 148 aaKnown RBP9.62□□□□□ -0.87
CDH1-210ENST00000566612 TPPP2P59282 170 aa9.62□□□□□ -0.87
CDH1-210ENST00000566612 OR8I2Q8N0Y5 310 aa9.62□□□□□ -0.87
CDH1-210ENST00000566612 GGACTQ9BVM4 153 aa9.62□□□□□ -0.87
CDH1-210ENST00000566612 COA4Q9NYJ1 87 aa9.62□□□□□ -0.87
CDH1-210ENST00000566612 LRP4O75096 1905 aa9.61□□□□□ -0.87
CDH1-210ENST00000566612 SCO2A0A1W2PP80 73 aa9.61□□□□□ -0.87
CDH1-210ENST00000566612 C17orf100A8MU93 164 aa9.61□□□□□ -0.87
CDH1-210ENST00000566612 TMEM14EPQ6UXP3 125 aa9.61□□□□□ -0.87
CDH1-210ENST00000566612 MBD3L1Q8WWY6 194 aa9.61□□□□□ -0.87
CDH1-210ENST00000566612 DIRC2Q96SL1 478 aa9.61□□□□□ -0.87
CDH1-210ENST00000566612 PAXXQ9BUH6 204 aa9.61□□□□□ -0.87
CDH1-210ENST00000566612 TMEM106BQ9NUM4 274 aa9.61□□□□□ -0.87
CDH1-210ENST00000566612 NOTCH3Q9UM47 2321 aa9.61□□□□□ -0.87
CDH1-210ENST00000566612 CEP192Q8TEP8 1941 aa9.61□□□□□ -0.87
CDH1-210ENST00000566612 A0A087X0M5 115 aa9.61□□□□□ -0.87
CDH1-210ENST00000566612 A0A1B0GX30 115 aa9.61□□□□□ -0.87
CDH1-210ENST00000566612 SLC17A3O00476 420 aa9.61□□□□□ -0.87
CDH1-210ENST00000566612 CT45A10P0DMU9 189 aa9.61□□□□□ -0.87
CDH1-210ENST00000566612 AMTP48728 403 aa9.61□□□□□ -0.87
CDH1-210ENST00000566612 ARF6P62330 175 aa9.61□□□□□ -0.87
CDH1-210ENST00000566612 Q56UQ5 140 aa9.61□□□□□ -0.87
CDH1-210ENST00000566612 ASCL5Q7RTU5 278 aa9.61□□□□□ -0.87
CDH1-210ENST00000566612 OR8B3Q8NGG8 313 aa9.61□□□□□ -0.87
CDH1-210ENST00000566612 OR8B2Q96RD0 313 aa9.61□□□□□ -0.87
CDH1-210ENST00000566612 ELOVL1Q9BW60 279 aa9.61□□□□□ -0.87
CDH1-210ENST00000566612 SRD5A3Q9H8P0 318 aa9.61□□□□□ -0.87
CDH1-210ENST00000566612 IQCJQ1A5X6 159 aa9.61□□□□□ -0.87
CDH1-210ENST00000566612 KIAA1644Q3SXP7 199 aa9.61□□□□□ -0.87
CDH1-210ENST00000566612 HEPN1Q6WQI6 88 aa9.61□□□□□ -0.87
CDH1-210ENST00000566612 Q6ZSR3 168 aa9.61□□□□□ -0.87
CDH1-210ENST00000566612 DOLPP1Q86YN1 238 aa9.61□□□□□ -0.87
CDH1-210ENST00000566612 OR4C13Q8NGP0 309 aa9.61□□□□□ -0.87
CDH1-210ENST00000566612 SCNM1Q9BWG6 230 aa9.61□□□□□ -0.87
CDH1-210ENST00000566612 LPAR2Q9HBW0 351 aa9.61□□□□□ -0.87
CDH1-210ENST00000566612 ZNRD1Q9P1U0 126 aa9.61□□□□□ -0.87
CDH1-210ENST00000566612 WASHC3Q9Y3C0 194 aa9.61□□□□□ -0.87
CDH1-210ENST00000566612 ARHGAP21Q5T5U3 1957 aa9.6□□□□□ -0.87
CDH1-210ENST00000566612 GRIFINA4D1Z8 144 aa9.6□□□□□ -0.87
CDH1-210ENST00000566612 ERVK11-1P61568 191 aa9.6□□□□□ -0.87
CDH1-210ENST00000566612 MBNL2Q5VZF2 373 aaKnown RBP9.6□□□□□ -0.87
CDH1-210ENST00000566612 IGHV1-69-2A0A0G2JMI3 117 aa9.6□□□□□ -0.87
CDH1-210ENST00000566612 CSN1S1P47710 185 aa9.6□□□□□ -0.87
CDH1-210ENST00000566612 SPRY4Q9C004 299 aa9.6□□□□□ -0.87
CDH1-210ENST00000566612 A0A087WWC5 75 aa9.6□□□□□ -0.87
CDH1-210ENST00000566612 SERTM2A0A1B0GWG4 89 aa9.6□□□□□ -0.87
CDH1-210ENST00000566612 HSBP1L1C9JCN9 74 aa9.6□□□□□ -0.87
CDH1-210ENST00000566612 C1QTNF9P0C862 333 aa9.6□□□□□ -0.87
CDH1-210ENST00000566612 RPL29P47914 159 aaKnown RBP9.6□□□□□ -0.87
CDH1-210ENST00000566612 RPL11P62913 178 aaKnown RBP9.6□□□□□ -0.87
CDH1-210ENST00000566612 GFI1BQ5VTD9 330 aa9.6□□□□□ -0.87
CDH1-210ENST00000566612 MIR17HGQ75NE6 70 aa9.6□□□□□ -0.87
CDH1-210ENST00000566612 OR1P1Q8NH06 330 aa9.6□□□□□ -0.87
CDH1-210ENST00000566612 PRO3102Q9H379 93 aa9.6□□□□□ -0.87
CDH1-210ENST00000566612 DCAF16Q9NXF7 216 aa9.6□□□□□ -0.87
CDH1-210ENST00000566612 Q8NFD4 153 aa9.59□□□□□ -0.87
CDH1-210ENST00000566612 OR10W1Q8NGF6 305 aa9.59□□□□□ -0.87
CDH1-210ENST00000566612 SNRNP40Q96DI7 357 aaKnown RBP9.59□□□□□ -0.87
CDH1-210ENST00000566612 DNAJC4Q9NNZ3 241 aa9.59□□□□□ -0.87
CDH1-210ENST00000566612 RALYQ9UKM9 306 aaKnown RBP9.59□□□□□ -0.87
CDH1-210ENST00000566612 WDR83OSQ9Y284 106 aa9.59□□□□□ -0.87
CDH1-210ENST00000566612 ATRXP46100 2492 aa9.59□□□□□ -0.87
CDH1-210ENST00000566612 HIST1H2BKO60814 126 aa9.59□□□□□ -0.87
CDH1-210ENST00000566612 MOSP00540 346 aa9.59□□□□□ -0.87
CDH1-210ENST00000566612 HIST1H2BJP06899 126 aa9.59□□□□□ -0.87
CDH1-210ENST00000566612 SAA1P0DJI8 122 aaPredicted RBP9.59□□□□□ -0.87
CDH1-210ENST00000566612 HIST1H2BOP23527 126 aa9.59□□□□□ -0.87
CDH1-210ENST00000566612 HIST1H2BBP33778 126 aa9.59□□□□□ -0.87
CDH1-210ENST00000566612 HIST1H2BDP58876 126 aa9.59□□□□□ -0.87
CDH1-210ENST00000566612 HIST1H2BCP62807 126 aa9.59□□□□□ -0.87
CDH1-210ENST00000566612 HIST2H2BEQ16778 126 aa9.59□□□□□ -0.87
CDH1-210ENST00000566612 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.59□□□□□ -0.87
CDH1-210ENST00000566612 OR9G1Q8NH87 305 aa9.59□□□□□ -0.87
CDH1-210ENST00000566612 HIST1H2BHQ93079 126 aa9.59□□□□□ -0.87
CDH1-210ENST00000566612 HIST1H2BNQ99877 126 aa9.59□□□□□ -0.87
CDH1-210ENST00000566612 HIST1H2BMQ99879 126 aa9.59□□□□□ -0.87
CDH1-210ENST00000566612 NUP210LQ5VU65 1888 aa9.59□□□□□ -0.87
CDH1-210ENST00000566612 DLL1O00548 723 aa9.59□□□□□ -0.87
CDH1-210ENST00000566612 C8orf88P0DMB2 117 aa9.59□□□□□ -0.87
CDH1-210ENST00000566612 USF1P22415 310 aaPredicted RBP9.59□□□□□ -0.87
CDH1-210ENST00000566612 NUBP1P53384 320 aa9.59□□□□□ -0.87
CDH1-210ENST00000566612 MUC15Q8N387 334 aa9.59□□□□□ -0.87
CDH1-210ENST00000566612 SFRP2Q96HF1 295 aa9.59□□□□□ -0.87
CDH1-210ENST00000566612 OR51M1Q9H341 326 aa9.59□□□□□ -0.87
CDH1-210ENST00000566612 TNFRSF19Q9NS68 423 aa9.59□□□□□ -0.87
CDH1-210ENST00000566612 NPIPB11E5RHQ5 1161 aa9.58□□□□□ -0.88
CDH1-210ENST00000566612 MC5RP33032 325 aa9.58□□□□□ -0.88
CDH1-210ENST00000566612 MFAP2P55001 183 aa9.58□□□□□ -0.88
CDH1-210ENST00000566612 OR5I1Q13606 314 aa9.58□□□□□ -0.88
CDH1-210ENST00000566612 RNASEKQ6P5S7 137 aaKnown RBP9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms