RNA–Protein interactions for RNA: ENST00000566510.5

CDH1-209, Transcript of cadherin 1, humanhuman

TSL 5

Gene CDH1, Length 2,661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-209ENST00000566510 TRIP6Q15654 476 aaKnown RBP11.71□□□□□ -0.53
CDH1-209ENST00000566510 MIR17HGQ75NE6 70 aa11.71□□□□□ -0.53
CDH1-209ENST00000566510 MOB3BQ86TA1 216 aa11.71□□□□□ -0.53
CDH1-209ENST00000566510 ATG101Q9BSB4 218 aa11.71□□□□□ -0.53
CDH1-209ENST00000566510 MRPL18Q9H0U6 180 aaKnown RBP11.71□□□□□ -0.53
CDH1-209ENST00000566510 FCN1O00602 326 aa11.71□□□□□ -0.54
CDH1-209ENST00000566510 EREGO14944 169 aa11.71□□□□□ -0.54
CDH1-209ENST00000566510 GATA2P23769 480 aaPredicted RBP11.71□□□□□ -0.54
CDH1-209ENST00000566510 KLF3P57682 345 aaPredicted RBP11.71□□□□□ -0.54
CDH1-209ENST00000566510 LBHQ53QV2 105 aaPredicted RBP11.71□□□□□ -0.54
CDH1-209ENST00000566510 DDB2Q92466 427 aa11.71□□□□□ -0.54
CDH1-209ENST00000566510 IL36BQ9NZH7 164 aa11.71□□□□□ -0.54
CDH1-209ENST00000566510 OR51B2Q9Y5P1 312 aa11.71□□□□□ -0.54
CDH1-209ENST00000566510 DSCAML1Q8TD84 2053 aa11.71□□□□□ -0.54
CDH1-209ENST00000566510 CACNA1HO95180 2353 aa11.7□□□□□ -0.54
CDH1-209ENST00000566510 DCHS1Q96JQ0 3298 aa11.7□□□□□ -0.54
CDH1-209ENST00000566510 TRAV17A0A0B4J275 112 aa11.7□□□□□ -0.54
CDH1-209ENST00000566510 TRGV8A0A0C4DH27 118 aa11.7□□□□□ -0.54
CDH1-209ENST00000566510 CRISP2P16562 243 aa11.7□□□□□ -0.54
CDH1-209ENST00000566510 C17orf58Q2M2W7 97 aa11.7□□□□□ -0.54
CDH1-209ENST00000566510 BAGE3Q86Y29 109 aa11.7□□□□□ -0.54
CDH1-209ENST00000566510 BAGE2Q86Y30 109 aa11.7□□□□□ -0.54
CDH1-209ENST00000566510 BEND2Q8NDZ0 799 aa11.7□□□□□ -0.54
CDH1-209ENST00000566510 OR1L6Q8NGR2 347 aa11.7□□□□□ -0.54
CDH1-209ENST00000566510 TBX15Q96SF7 602 aa11.7□□□□□ -0.54
CDH1-209ENST00000566510 GCM1Q9NP62 436 aa11.7□□□□□ -0.54
CDH1-209ENST00000566510 TANC2Q9HCD6 1990 aa11.7□□□□□ -0.54
CDH1-209ENST00000566510 J3QR06 171 aa11.7□□□□□ -0.54
CDH1-209ENST00000566510 M0R296 226 aa11.7□□□□□ -0.54
CDH1-209ENST00000566510 FRMD6-AS1P0C7T7 363 aa11.7□□□□□ -0.54
CDH1-209ENST00000566510 TMEM14BQ9NUH8 114 aa11.7□□□□□ -0.54
CDH1-209ENST00000566510 POLR3KQ9Y2Y1 108 aaPredicted RBP11.7□□□□□ -0.54
CDH1-209ENST00000566510 SLC25A15Q9Y619 301 aa11.7□□□□□ -0.54
CDH1-209ENST00000566510 TRGV10A0A0A0MS01 117 aa11.69□□□□□ -0.54
CDH1-209ENST00000566510 AHRRA9YTQ3 701 aa11.69□□□□□ -0.54
CDH1-209ENST00000566510 OR7C2O60412 319 aa11.69□□□□□ -0.54
CDH1-209ENST00000566510 OR10J4P0C629 311 aa11.69□□□□□ -0.54
CDH1-209ENST00000566510 CRYBB3P26998 211 aa11.69□□□□□ -0.54
CDH1-209ENST00000566510 RPL29P47914 159 aaKnown RBP11.69□□□□□ -0.54
CDH1-209ENST00000566510 YPEL3P61236 119 aaPredicted RBP11.69□□□□□ -0.54
CDH1-209ENST00000566510 RPEL1Q2QD12 228 aa11.69□□□□□ -0.54
CDH1-209ENST00000566510 TOMM20LQ6UXN7 152 aa11.69□□□□□ -0.54
CDH1-209ENST00000566510 PLEKHA3Q9HB20 300 aa11.69□□□□□ -0.54
CDH1-209ENST00000566510 IDI2-AS1Q9NZ38 188 aa11.69□□□□□ -0.54
CDH1-209ENST00000566510 DKK4Q9UBT3 224 aa11.69□□□□□ -0.54
CDH1-209ENST00000566510 MGAQ8IWI9 3026 aa11.69□□□□□ -0.54
CDH1-209ENST00000566510 KBTBD11-OT1A0A1B0GTJ5 212 aa11.69□□□□□ -0.54
CDH1-209ENST00000566510 HELTA6NFD8 242 aa11.69□□□□□ -0.54
CDH1-209ENST00000566510 SNURFLB1AK76 121 aa11.69□□□□□ -0.54
CDH1-209ENST00000566510 OR10J1P30954 320 aa11.69□□□□□ -0.54
CDH1-209ENST00000566510 GNG4P50150 75 aa11.69□□□□□ -0.54
CDH1-209ENST00000566510 SLC35B1P78383 322 aa11.69□□□□□ -0.54
CDH1-209ENST00000566510 KRTCAP3Q53RY4 240 aa11.69□□□□□ -0.54
CDH1-209ENST00000566510 DOLPP1Q86YN1 238 aa11.69□□□□□ -0.54
CDH1-209ENST00000566510 MMD2Q8IY49 270 aa11.69□□□□□ -0.54
CDH1-209ENST00000566510 OR8I2Q8N0Y5 310 aa11.69□□□□□ -0.54
CDH1-209ENST00000566510 EAF1Q96JC9 268 aaPredicted RBP11.69□□□□□ -0.54
CDH1-209ENST00000566510 ZNRD1Q9P1U0 126 aa11.69□□□□□ -0.54
CDH1-209ENST00000566510 FOXA2Q9Y261 457 aaPredicted RBP11.69□□□□□ -0.54
CDH1-209ENST00000566510 SERF1AO75920 110 aa11.68□□□□□ -0.54
CDH1-209ENST00000566510 RAB4BP61018 213 aa11.68□□□□□ -0.54
CDH1-209ENST00000566510 CR1LQ2VPA4 569 aa11.68□□□□□ -0.54
CDH1-209ENST00000566510 PQLC2Q6ZP29 291 aa11.68□□□□□ -0.54
CDH1-209ENST00000566510 NABP2Q9BQ15 211 aa11.68□□□□□ -0.54
CDH1-209ENST00000566510 SAMD10Q9BYL1 202 aa11.68□□□□□ -0.54
CDH1-209ENST00000566510 IGKV1-16P04430 117 aa11.68□□□□□ -0.54
CDH1-209ENST00000566510 WT1P19544 449 aaPredicted RBP11.68□□□□□ -0.54
CDH1-209ENST00000566510 TPPP2P59282 170 aa11.68□□□□□ -0.54
CDH1-209ENST00000566510 FXYD3Q14802 87 aa11.68□□□□□ -0.54
CDH1-209ENST00000566510 MLANAQ16655 118 aa11.68□□□□□ -0.54
CDH1-209ENST00000566510 DEFB109BQ30KR1 87 aa11.68□□□□□ -0.54
CDH1-209ENST00000566510 CENPWQ5EE01 88 aa11.68□□□□□ -0.54
CDH1-209ENST00000566510 ZNF705AQ6ZN79 300 aaPredicted RBP11.68□□□□□ -0.54
CDH1-209ENST00000566510 ZCCHC14Q8WYQ9 949 aaKnown RBP11.68□□□□□ -0.54
CDH1-209ENST00000566510 RND1Q92730 232 aa11.68□□□□□ -0.54
CDH1-209ENST00000566510 LOXL4Q96JB6 756 aa11.68□□□□□ -0.54
CDH1-209ENST00000566510 DMXL1Q9Y485 3027 aa11.68□□□□□ -0.54
CDH1-209ENST00000566510 TCAPO15273 167 aa11.67□□□□□ -0.54
CDH1-209ENST00000566510 TCL1AP56279 114 aa11.67□□□□□ -0.54
CDH1-209ENST00000566510 CORO2AQ92828 525 aa11.67□□□□□ -0.54
CDH1-209ENST00000566510 CCL13Q99616 98 aa11.67□□□□□ -0.54
CDH1-209ENST00000566510 HSPB9Q9BQS6 159 aa11.67□□□□□ -0.54
CDH1-209ENST00000566510 RNASE7Q9H1E1 156 aaKnown RBP11.67□□□□□ -0.54
CDH1-209ENST00000566510 F2Z2F3 143 aa11.67□□□□□ -0.54
CDH1-209ENST00000566510 MMP23AO75900 390 aa11.67□□□□□ -0.54
CDH1-209ENST00000566510 C1orf194Q5T5A4 169 aa11.67□□□□□ -0.54
CDH1-209ENST00000566510 C1orf174Q8IYL3 243 aa11.67□□□□□ -0.54
CDH1-209ENST00000566510 SNRNP40Q96DI7 357 aaKnown RBP11.67□□□□□ -0.54
CDH1-209ENST00000566510 FAM103A1Q9BTL3 118 aaKnown RBP11.67□□□□□ -0.54
CDH1-209ENST00000566510 SNHG12Q9BXW3 62 aa11.67□□□□□ -0.54
CDH1-209ENST00000566510 RAI1Q7Z5J4 1906 aaPredicted RBP11.66□□□□□ -0.54
CDH1-209ENST00000566510 LINC00869P0C866 280 aa11.66□□□□□ -0.54
CDH1-209ENST00000566510 CFHR2P36980 270 aa11.66□□□□□ -0.54
CDH1-209ENST00000566510 PRR20EP86478 221 aa11.66□□□□□ -0.54
CDH1-209ENST00000566510 PRR20CP86479 221 aa11.66□□□□□ -0.54
CDH1-209ENST00000566510 PRR20DP86480 221 aa11.66□□□□□ -0.54
CDH1-209ENST00000566510 PRR20BP86481 221 aa11.66□□□□□ -0.54
CDH1-209ENST00000566510 PRR20AP86496 221 aa11.66□□□□□ -0.54
CDH1-209ENST00000566510 Q6ZWC4 215 aa11.66□□□□□ -0.54
CDH1-209ENST00000566510 FAM216BQ8N7L0 139 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms