RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 YLPM1P49750 1951 aaKnown RBP16.97■□□□□ 0.31
MAP1LC3B-206ENST00000564844 GPR6P46095 362 aaPredicted RBP16.97■□□□□ 0.31
MAP1LC3B-206ENST00000564844 GAGE1Q13065 139 aa16.97■□□□□ 0.31
MAP1LC3B-206ENST00000564844 OR1C1Q15619 314 aa16.97■□□□□ 0.31
MAP1LC3B-206ENST00000564844 TRIP6Q15654 476 aaKnown RBP16.97■□□□□ 0.31
MAP1LC3B-206ENST00000564844 LAMTOR2Q9Y2Q5 125 aa16.97■□□□□ 0.31
MAP1LC3B-206ENST00000564844 HELTA6NFD8 242 aa16.96■□□□□ 0.31
MAP1LC3B-206ENST00000564844 VWC2Q2TAL6 325 aa16.96■□□□□ 0.31
MAP1LC3B-206ENST00000564844 Q56UQ5 140 aa16.96■□□□□ 0.31
MAP1LC3B-206ENST00000564844 ATP1A1-AS1Q5TC04 95 aa16.96■□□□□ 0.31
MAP1LC3B-206ENST00000564844 ETFRF1Q6IPR1 90 aa16.96■□□□□ 0.31
MAP1LC3B-206ENST00000564844 C1orf174Q8IYL3 243 aa16.96■□□□□ 0.31
MAP1LC3B-206ENST00000564844 CT55Q8WUE5 264 aa16.96■□□□□ 0.31
MAP1LC3B-206ENST00000564844 V9GYV3 84 aa16.96■□□□□ 0.31
MAP1LC3B-206ENST00000564844 OOEPA6NGQ2 149 aa16.96■□□□□ 0.31
MAP1LC3B-206ENST00000564844 LINC00614P0C842 121 aa16.96■□□□□ 0.31
MAP1LC3B-206ENST00000564844 ARG2P78540 354 aa16.96■□□□□ 0.31
MAP1LC3B-206ENST00000564844 TIMM8BQ9Y5J9 83 aaPredicted RBP16.96■□□□□ 0.31
MAP1LC3B-206ENST00000564844 SELENOKQ9Y6D0 94 aa16.96■□□□□ 0.31
MAP1LC3B-206ENST00000564844 DYSFO75923 2080 aa16.96■□□□□ 0.3
MAP1LC3B-206ENST00000564844 ZNF146Q15072 292 aa16.95■□□□□ 0.3
MAP1LC3B-206ENST00000564844 ZNF718Q3SXZ3 478 aa16.95■□□□□ 0.3
MAP1LC3B-206ENST00000564844 ABHD17BQ5VST6 288 aa16.95■□□□□ 0.3
MAP1LC3B-206ENST00000564844 TMEM251Q8N6I4 163 aa16.95■□□□□ 0.3
MAP1LC3B-206ENST00000564844 FAM168AQ92567 244 aa16.95■□□□□ 0.3
MAP1LC3B-206ENST00000564844 C1orf159Q96HA4 380 aa16.95■□□□□ 0.3
MAP1LC3B-206ENST00000564844 TAAR6Q96RI8 345 aa16.95■□□□□ 0.3
MAP1LC3B-206ENST00000564844 TTTY12Q9BZ98 90 aa16.95■□□□□ 0.3
MAP1LC3B-206ENST00000564844 IGKV3D-15A0A087WSY6 115 aa16.95■□□□□ 0.3
MAP1LC3B-206ENST00000564844 DPRXA6NFQ7 191 aa16.95■□□□□ 0.3
MAP1LC3B-206ENST00000564844 RNF2Q99496 336 aa16.95■□□□□ 0.3
MAP1LC3B-206ENST00000564844 RELBQ01201 579 aa16.95■□□□□ 0.3
MAP1LC3B-206ENST00000564844 TBC1D28Q2M2D7 210 aa16.95■□□□□ 0.3
MAP1LC3B-206ENST00000564844 LINC00470Q9BZP3 86 aa16.95■□□□□ 0.3
MAP1LC3B-206ENST00000564844 NBASA2RRP1 2371 aa16.95■□□□□ 0.3
MAP1LC3B-206ENST00000564844 CACNA1HO95180 2353 aa16.95■□□□□ 0.3
MAP1LC3B-206ENST00000564844 IGHV3-48P01763 117 aa16.94■□□□□ 0.3
MAP1LC3B-206ENST00000564844 CD24P25063 80 aa16.94■□□□□ 0.3
MAP1LC3B-206ENST00000564844 OPRK1P41145 380 aa16.94■□□□□ 0.3
MAP1LC3B-206ENST00000564844 PRR27Q6MZM9 219 aa16.94■□□□□ 0.3
MAP1LC3B-206ENST00000564844 CLCF1Q9UBD9 225 aa16.94■□□□□ 0.3
MAP1LC3B-206ENST00000564844 TMEM238LA0A1B0GVL6 79 aa16.94■□□□□ 0.3
MAP1LC3B-206ENST00000564844 GFRA3O60609 400 aa16.94■□□□□ 0.3
MAP1LC3B-206ENST00000564844 IGLC2P0DOY2 106 aa16.94■□□□□ 0.3
MAP1LC3B-206ENST00000564844 IGLC3P0DOY3 106 aa16.94■□□□□ 0.3
MAP1LC3B-206ENST00000564844 LHFPL4Q7Z7J7 247 aa16.94■□□□□ 0.3
MAP1LC3B-206ENST00000564844 GMPPAQ96IJ6 420 aaPredicted RBP16.94■□□□□ 0.3
MAP1LC3B-206ENST00000564844 SSBP4Q9BWG4 385 aaPredicted RBP16.94■□□□□ 0.3
MAP1LC3B-206ENST00000564844 IGHV3OR15-7A0A075B7D8 119 aa16.93■□□□□ 0.3
MAP1LC3B-206ENST00000564844 SMPD2O60906 423 aa16.93■□□□□ 0.3
MAP1LC3B-206ENST00000564844 PRB4P10163 310 aaPredicted RBP16.93■□□□□ 0.3
MAP1LC3B-206ENST00000564844 EIF4EBP1Q13541 118 aaPredicted RBP16.93■□□□□ 0.3
MAP1LC3B-206ENST00000564844 OR4B1Q8NGF8 309 aa16.93■□□□□ 0.3
MAP1LC3B-206ENST00000564844 NAV3Q8IVL0 2385 aa16.93■□□□□ 0.3
MAP1LC3B-206ENST00000564844 TACC2O95359 2948 aa16.93■□□□□ 0.3
MAP1LC3B-206ENST00000564844 LOC102724200A0A096LPH7 203 aaPredicted RBP16.93■□□□□ 0.3
MAP1LC3B-206ENST00000564844 PMCHL1Q16048 86 aa16.93■□□□□ 0.3
MAP1LC3B-206ENST00000564844 RIF1Q5UIP0 2472 aaKnown RBP16.93■□□□□ 0.3
MAP1LC3B-206ENST00000564844 ASCL3Q9NQ33 180 aa16.93■□□□□ 0.3
MAP1LC3B-206ENST00000564844 TANC2Q9HCD6 1990 aa16.92■□□□□ 0.3
MAP1LC3B-206ENST00000564844 A0A1W2PN81 502 aa16.92■□□□□ 0.3
MAP1LC3B-206ENST00000564844 CER1O95813 267 aa16.92■□□□□ 0.3
MAP1LC3B-206ENST00000564844 DUTP33316 252 aaKnown RBP16.92■□□□□ 0.3
MAP1LC3B-206ENST00000564844 CAMPP49913 170 aa16.92■□□□□ 0.3
MAP1LC3B-206ENST00000564844 NRN1LQ496H8 165 aa16.92■□□□□ 0.3
MAP1LC3B-206ENST00000564844 BORCS7Q96B45 105 aa16.92■□□□□ 0.3
MAP1LC3B-206ENST00000564844 PLEKHA3Q9HB20 300 aa16.92■□□□□ 0.3
MAP1LC3B-206ENST00000564844 UQCR10Q9UDW1 63 aa16.92■□□□□ 0.3
MAP1LC3B-206ENST00000564844 BMPR1BO00238 502 aa16.92■□□□□ 0.3
MAP1LC3B-206ENST00000564844 CEACAM8P31997 349 aaPredicted RBP16.92■□□□□ 0.3
MAP1LC3B-206ENST00000564844 ZNF134P52741 427 aa16.92■□□□□ 0.3
MAP1LC3B-206ENST00000564844 C1orf229Q6ZS94 237 aaPredicted RBP16.92■□□□□ 0.3
MAP1LC3B-206ENST00000564844 CLEC7AQ9BXN2 247 aa16.92■□□□□ 0.3
MAP1LC3B-206ENST00000564844 TMEM140Q9NV12 185 aa16.92■□□□□ 0.3
MAP1LC3B-206ENST00000564844 TCF19Q9Y242 345 aa16.92■□□□□ 0.3
MAP1LC3B-206ENST00000564844 KALRNO60229 2985 aa16.92■□□□□ 0.3
MAP1LC3B-206ENST00000564844 SLAQ13239 276 aa16.91■□□□□ 0.3
MAP1LC3B-206ENST00000564844 DCAF12Q5T6F0 453 aa16.91■□□□□ 0.3
MAP1LC3B-206ENST00000564844 TMEM136Q6ZRR5 245 aa16.91■□□□□ 0.3
MAP1LC3B-206ENST00000564844 Q8IYB0 196 aa16.91■□□□□ 0.3
MAP1LC3B-206ENST00000564844 RAB1CQ92928 201 aa16.91■□□□□ 0.3
MAP1LC3B-206ENST00000564844 MCRIP2Q9BUT9 160 aaKnown RBP16.91■□□□□ 0.3
MAP1LC3B-206ENST00000564844 NPVFQ9HCQ7 196 aa16.91■□□□□ 0.3
MAP1LC3B-206ENST00000564844 M0QZ24 198 aa16.91■□□□□ 0.3
MAP1LC3B-206ENST00000564844 RHOBP62745 196 aa16.91■□□□□ 0.3
MAP1LC3B-206ENST00000564844 CNEP1R1Q8N9A8 125 aa16.91■□□□□ 0.3
MAP1LC3B-206ENST00000564844 ZBTB34Q8NCN2 500 aa16.91■□□□□ 0.3
MAP1LC3B-206ENST00000564844 KLF14Q8TD94 323 aaPredicted RBP16.91■□□□□ 0.3
MAP1LC3B-206ENST00000564844 FAM173AQ9BQD7 235 aa16.91■□□□□ 0.3
MAP1LC3B-206ENST00000564844 SH2D7A6NKC9 451 aaPredicted RBP16.9■□□□□ 0.3
MAP1LC3B-206ENST00000564844 H0Y8G0 127 aa16.9■□□□□ 0.3
MAP1LC3B-206ENST00000564844 ZNF324O75467 553 aaPredicted RBP16.9■□□□□ 0.3
MAP1LC3B-206ENST00000564844 ERVK-16P61578 105 aa16.9■□□□□ 0.3
MAP1LC3B-206ENST00000564844 FBXW9Q5XUX1 488 aa16.9■□□□□ 0.3
MAP1LC3B-206ENST00000564844 TEPPQ6URK8 271 aa16.9■□□□□ 0.3
MAP1LC3B-206ENST00000564844 NIT1Q86X76 327 aa16.9■□□□□ 0.3
MAP1LC3B-206ENST00000564844 BCL2L2Q92843 193 aaPredicted RBP16.9■□□□□ 0.3
MAP1LC3B-206ENST00000564844 CDX2Q99626 313 aaPredicted RBP16.9■□□□□ 0.3
MAP1LC3B-206ENST00000564844 B4GALT7Q9UBV7 327 aa16.9■□□□□ 0.3
MAP1LC3B-206ENST00000564844 BDP1A6H8Y1 2624 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms