RNA–Protein interactions for RNA: ENST00000564747.1

GTF3C1-205, Transcript of general transcription factor IIIC subunit 1, humanhuman

Gene GTF3C1, Length 2,798 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-205ENST00000564747 SEM1Q6ZVN7 128 aa12.72□□□□□ -0.37
GTF3C1-205ENST00000564747 SLC24A4Q8NFF2 622 aa12.72□□□□□ -0.37
GTF3C1-205ENST00000564747 ITLN1Q8WWA0 313 aa12.72□□□□□ -0.37
GTF3C1-205ENST00000564747 IGFBP2P18065 325 aa12.71□□□□□ -0.37
GTF3C1-205ENST00000564747 RAB4AP20338 218 aa12.71□□□□□ -0.37
GTF3C1-205ENST00000564747 RPL29P47914 159 aaKnown RBP12.71□□□□□ -0.37
GTF3C1-205ENST00000564747 HSPE1P61604 102 aaKnown RBP12.71□□□□□ -0.37
GTF3C1-205ENST00000564747 IGFL2Q6UWQ7 119 aa12.71□□□□□ -0.37
GTF3C1-205ENST00000564747 OR4P4Q8NGL7 312 aa12.71□□□□□ -0.37
GTF3C1-205ENST00000564747 FAM122AQ96E09 287 aa12.71□□□□□ -0.37
GTF3C1-205ENST00000564747 TMEM14BQ9NUH8 114 aa12.71□□□□□ -0.37
GTF3C1-205ENST00000564747 GRIFINA4D1Z8 144 aa12.71□□□□□ -0.38
GTF3C1-205ENST00000564747 LHBP01229 141 aa12.71□□□□□ -0.38
GTF3C1-205ENST00000564747 RHOBP62745 196 aa12.71□□□□□ -0.38
GTF3C1-205ENST00000564747 TBX15Q96SF7 602 aa12.71□□□□□ -0.38
GTF3C1-205ENST00000564747 ACTL6BO94805 426 aa12.7□□□□□ -0.38
GTF3C1-205ENST00000564747 RAB7AP51149 207 aa12.7□□□□□ -0.38
GTF3C1-205ENST00000564747 C1orf174Q8IYL3 243 aa12.7□□□□□ -0.38
GTF3C1-205ENST00000564747 LYG1Q8N1E2 194 aa12.7□□□□□ -0.38
GTF3C1-205ENST00000564747 CMTM2Q8TAZ6 248 aa12.7□□□□□ -0.38
GTF3C1-205ENST00000564747 ZCCHC14Q8WYQ9 949 aaKnown RBP12.7□□□□□ -0.38
GTF3C1-205ENST00000564747 AHRRA9YTQ3 701 aa12.7□□□□□ -0.38
GTF3C1-205ENST00000564747 ZNF25P17030 456 aaPredicted RBP12.7□□□□□ -0.38
GTF3C1-205ENST00000564747 MOB3BQ86TA1 216 aa12.7□□□□□ -0.38
GTF3C1-205ENST00000564747 DEFB108BQ8NET1 73 aa12.7□□□□□ -0.38
GTF3C1-205ENST00000564747 FAM216AQ8WUB2 273 aa12.7□□□□□ -0.38
GTF3C1-205ENST00000564747 IDI2-AS1Q9NZ38 188 aa12.7□□□□□ -0.38
GTF3C1-205ENST00000564747 FOXA2Q9Y261 457 aaPredicted RBP12.7□□□□□ -0.38
GTF3C1-205ENST00000564747 DMXL1Q9Y485 3027 aa12.7□□□□□ -0.38
GTF3C1-205ENST00000564747 KBTBD11-OT1A0A1B0GTJ5 212 aa12.69□□□□□ -0.38
GTF3C1-205ENST00000564747 CBLN1P23435 193 aa12.69□□□□□ -0.38
GTF3C1-205ENST00000564747 KLF3P57682 345 aaPredicted RBP12.69□□□□□ -0.38
GTF3C1-205ENST00000564747 YPEL3P61236 119 aaPredicted RBP12.69□□□□□ -0.38
GTF3C1-205ENST00000564747 MRPS11P82912 194 aaKnown RBP12.69□□□□□ -0.38
GTF3C1-205ENST00000564747 ZNF90Q03938 601 aa12.69□□□□□ -0.38
GTF3C1-205ENST00000564747 ZNF705AQ6ZN79 300 aaPredicted RBP12.69□□□□□ -0.38
GTF3C1-205ENST00000564747 MIR17HGQ75NE6 70 aa12.69□□□□□ -0.38
GTF3C1-205ENST00000564747 ENY2Q9NPA8 101 aa12.69□□□□□ -0.38
GTF3C1-205ENST00000564747 BTF3P20290 206 aaKnown RBP12.69□□□□□ -0.38
GTF3C1-205ENST00000564747 OR51B2Q9Y5P1 312 aa12.69□□□□□ -0.38
GTF3C1-205ENST00000564747 DSCAML1Q8TD84 2053 aa12.69□□□□□ -0.38
GTF3C1-205ENST00000564747 EP300Q09472 2414 aaPredicted RBP12.69□□□□□ -0.38
GTF3C1-205ENST00000564747 RP1L1Q8IWN7 2480 aaPredicted RBP12.69□□□□□ -0.38
GTF3C1-205ENST00000564747 YLPM1P49750 1951 aaKnown RBP12.69□□□□□ -0.38
GTF3C1-205ENST00000564747 FRMD6-AS1P0C7T7 363 aa12.69□□□□□ -0.38
GTF3C1-205ENST00000564747 CD33P20138 364 aa12.69□□□□□ -0.38
GTF3C1-205ENST00000564747 GNG10P50151 68 aa12.69□□□□□ -0.38
GTF3C1-205ENST00000564747 PRR20EP86478 221 aa12.69□□□□□ -0.38
GTF3C1-205ENST00000564747 PRR20CP86479 221 aa12.69□□□□□ -0.38
GTF3C1-205ENST00000564747 PRR20DP86480 221 aa12.69□□□□□ -0.38
GTF3C1-205ENST00000564747 PRR20BP86481 221 aa12.69□□□□□ -0.38
GTF3C1-205ENST00000564747 PRR20AP86496 221 aa12.69□□□□□ -0.38
GTF3C1-205ENST00000564747 RAB31Q13636 194 aa12.69□□□□□ -0.38
GTF3C1-205ENST00000564747 TOMM20LQ6UXN7 152 aa12.69□□□□□ -0.38
GTF3C1-205ENST00000564747 PLCE1Q9P212 2302 aa12.68□□□□□ -0.38
GTF3C1-205ENST00000564747 MMP23AO75900 390 aa12.68□□□□□ -0.38
GTF3C1-205ENST00000564747 LINC00869P0C866 280 aa12.68□□□□□ -0.38
GTF3C1-205ENST00000564747 OR5I1Q13606 314 aa12.68□□□□□ -0.38
GTF3C1-205ENST00000564747 ZNF474Q6S9Z5 364 aaPredicted RBP12.68□□□□□ -0.38
GTF3C1-205ENST00000564747 FAM169BQ8N8A8 192 aa12.68□□□□□ -0.38
GTF3C1-205ENST00000564747 LRFN3Q9BTN0 628 aa12.68□□□□□ -0.38
GTF3C1-205ENST00000564747 TMEM106BQ9NUM4 274 aa12.68□□□□□ -0.38
GTF3C1-205ENST00000564747 ZNRD1Q9P1U0 126 aa12.68□□□□□ -0.38
GTF3C1-205ENST00000564747 M0QZK8 103 aa12.68□□□□□ -0.38
GTF3C1-205ENST00000564747 DEFB109BQ30KR1 87 aa12.68□□□□□ -0.38
GTF3C1-205ENST00000564747 CYB5R2Q6BCY4 276 aa12.68□□□□□ -0.38
GTF3C1-205ENST00000564747 RPRMLQ8N4K4 120 aa12.68□□□□□ -0.38
GTF3C1-205ENST00000564747 IL36BQ9NZH7 164 aa12.68□□□□□ -0.38
GTF3C1-205ENST00000564747 ITGB1BP1O14713 200 aa12.67□□□□□ -0.38
GTF3C1-205ENST00000564747 GATA2P23769 480 aaPredicted RBP12.67□□□□□ -0.38
GTF3C1-205ENST00000564747 NEUROG1Q92886 237 aa12.67□□□□□ -0.38
GTF3C1-205ENST00000564747 EAF1Q96JC9 268 aaPredicted RBP12.67□□□□□ -0.38
GTF3C1-205ENST00000564747 TP53TG3Q9ULZ0 132 aa12.67□□□□□ -0.38
GTF3C1-205ENST00000564747 MGAQ8IWI9 3026 aa12.67□□□□□ -0.38
GTF3C1-205ENST00000564747 TRGV10A0A0A0MS01 117 aa12.67□□□□□ -0.38
GTF3C1-205ENST00000564747 IGKV1-16P04430 117 aa12.67□□□□□ -0.38
GTF3C1-205ENST00000564747 GLRXP35754 106 aa12.67□□□□□ -0.38
GTF3C1-205ENST00000564747 PSG5Q15238 335 aa12.67□□□□□ -0.38
GTF3C1-205ENST00000564747 C11orf52Q96A22 123 aa12.67□□□□□ -0.38
GTF3C1-205ENST00000564747 CACNA1HO95180 2353 aa12.67□□□□□ -0.38
GTF3C1-205ENST00000564747 IGKV1OR2-108A0A075B7D4 117 aa12.66□□□□□ -0.38
GTF3C1-205ENST00000564747 SRRM4A7MD48 611 aaKnown RBP12.66□□□□□ -0.38
GTF3C1-205ENST00000564747 J3QR06 171 aa12.66□□□□□ -0.38
GTF3C1-205ENST00000564747 MT-CO2P00403 227 aa12.66□□□□□ -0.38
GTF3C1-205ENST00000564747 RPLP1P05386 114 aaKnown RBP12.66□□□□□ -0.38
GTF3C1-205ENST00000564747 TPPP2P59282 170 aa12.66□□□□□ -0.38
GTF3C1-205ENST00000564747 MLANAQ16655 118 aa12.66□□□□□ -0.38
GTF3C1-205ENST00000564747 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.66□□□□□ -0.38
GTF3C1-205ENST00000564747 ZNF439Q8NDP4 499 aa12.66□□□□□ -0.38
GTF3C1-205ENST00000564747 SNRNP40Q96DI7 357 aaKnown RBP12.66□□□□□ -0.38
GTF3C1-205ENST00000564747 UHRF2Q96PU4 802 aa12.66□□□□□ -0.38
GTF3C1-205ENST00000564747 CCL13Q99616 98 aa12.66□□□□□ -0.38
GTF3C1-205ENST00000564747 GCM1Q9NP62 436 aa12.66□□□□□ -0.38
GTF3C1-205ENST00000564747 PARD6AQ9NPB6 346 aa12.66□□□□□ -0.38
GTF3C1-205ENST00000564747 ASCL3Q9NQ33 180 aa12.66□□□□□ -0.38
GTF3C1-205ENST00000564747 SPAARA0A1B0GVQ0 90 aa12.66□□□□□ -0.38
GTF3C1-205ENST00000564747 KRTCAP3Q53RY4 240 aa12.66□□□□□ -0.38
GTF3C1-205ENST00000564747 CHODLQ9H9P2 273 aa12.66□□□□□ -0.38
GTF3C1-205ENST00000564747 SLC45A2Q9UMX9 530 aa12.66□□□□□ -0.38
GTF3C1-205ENST00000564747 CNOT1A5YKK6 2376 aaKnown RBP12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms